RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 RUNDC3AQ59EK9 446 aa10.2□□□□□ -0.78
RTN3-209ENST00000538995 FAM91A1Q658Y4 838 aa10.2□□□□□ -0.78
RTN3-209ENST00000538995 OR7E24Q6IFN5 339 aa10.2□□□□□ -0.78
RTN3-209ENST00000538995 PRSS57Q6UWY2 283 aa10.2□□□□□ -0.78
RTN3-209ENST00000538995 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.2□□□□□ -0.78
RTN3-209ENST00000538995 KRTAP1-3Q8IUG1 177 aa10.2□□□□□ -0.78
RTN3-209ENST00000538995 SLC30A8Q8IWU4 369 aa10.2□□□□□ -0.78
RTN3-209ENST00000538995 C17orf78Q8N4C9 275 aa10.2□□□□□ -0.78
RTN3-209ENST00000538995 C11orf65Q8NCR3 313 aa10.2□□□□□ -0.78
RTN3-209ENST00000538995 C1orf162Q8NEQ5 155 aaPredicted RBP10.2□□□□□ -0.78
RTN3-209ENST00000538995 OR9K2Q8NGE7 335 aa10.2□□□□□ -0.78
RTN3-209ENST00000538995 MFSD8Q8NHS3 518 aa10.2□□□□□ -0.78
RTN3-209ENST00000538995 DNAJA4Q8WW22 397 aaPredicted RBP10.2□□□□□ -0.78
RTN3-209ENST00000538995 DNAJA3Q96EY1 480 aa10.2□□□□□ -0.78
RTN3-209ENST00000538995 ANKRD27Q96NW4 1050 aa10.2□□□□□ -0.78
RTN3-209ENST00000538995 CGREF1Q99674 301 aa10.2□□□□□ -0.78
RTN3-209ENST00000538995 GSX2Q9BZM3 304 aa10.2□□□□□ -0.78
RTN3-209ENST00000538995 TRIM2Q9C040 744 aa10.2□□□□□ -0.78
RTN3-209ENST00000538995 AMBRA1Q9C0C7 1298 aa10.2□□□□□ -0.78
RTN3-209ENST00000538995 RPS6KB2Q9UBS0 482 aa10.2□□□□□ -0.78
RTN3-209ENST00000538995 TESQ9UGI8 421 aaKnown RBP10.2□□□□□ -0.78
RTN3-209ENST00000538995 ZFHX3Q15911 3703 aa10.2□□□□□ -0.78
RTN3-209ENST00000538995 OR6C65A6NJZ3 312 aa10.19□□□□□ -0.78
RTN3-209ENST00000538995 ELOA3DA6NLF2 546 aaPredicted RBP10.19□□□□□ -0.78
RTN3-209ENST00000538995 PDLIM1O00151 329 aa10.19□□□□□ -0.78
RTN3-209ENST00000538995 AKR7A3O95154 331 aa10.19□□□□□ -0.78
RTN3-209ENST00000538995 PNMTP11086 282 aa10.19□□□□□ -0.78
RTN3-209ENST00000538995 NTF4P34130 210 aa10.19□□□□□ -0.78
RTN3-209ENST00000538995 P2RY4P51582 365 aa10.19□□□□□ -0.78
RTN3-209ENST00000538995 PCBP3P57721 371 aaKnown RBP10.19□□□□□ -0.78
RTN3-209ENST00000538995 NCALDP61601 193 aa10.19□□□□□ -0.78
RTN3-209ENST00000538995 TGFBR3Q03167 851 aa10.19□□□□□ -0.78
RTN3-209ENST00000538995 BNIP2Q12982 314 aa10.19□□□□□ -0.78
RTN3-209ENST00000538995 NFYCQ13952 458 aa10.19□□□□□ -0.78
RTN3-209ENST00000538995 CAPRIN1Q14444 709 aaKnown RBP10.19□□□□□ -0.78
RTN3-209ENST00000538995 CYP51A1Q16850 503 aa10.19□□□□□ -0.78
RTN3-209ENST00000538995 ELOA3BQ3SY89 546 aa10.19□□□□□ -0.78
RTN3-209ENST00000538995 COQ5Q5HYK3 327 aa10.19□□□□□ -0.78
RTN3-209ENST00000538995 Q5PR19 223 aa10.19□□□□□ -0.78
RTN3-209ENST00000538995 SWT1Q5T5J6 900 aaKnown RBP10.19□□□□□ -0.78
RTN3-209ENST00000538995 ABHD12BQ7Z5M8 362 aaPredicted RBP10.19□□□□□ -0.78
RTN3-209ENST00000538995 NET1Q7Z628 596 aaPredicted RBP10.19□□□□□ -0.78
RTN3-209ENST00000538995 RETREG3Q86VR2 466 aa10.19□□□□□ -0.78
RTN3-209ENST00000538995 ARMC8Q8IUR7 673 aa10.19□□□□□ -0.78
RTN3-209ENST00000538995 P3H2Q8IVL5 708 aa10.19□□□□□ -0.78
RTN3-209ENST00000538995 TMEM99Q8N816 258 aa10.19□□□□□ -0.78
RTN3-209ENST00000538995 POMGNT2Q8NAT1 580 aa10.19□□□□□ -0.78
RTN3-209ENST00000538995 WFDC11Q8NEX6 87 aa10.19□□□□□ -0.78
RTN3-209ENST00000538995 ELOA3Q8NG57 546 aa10.19□□□□□ -0.78
RTN3-209ENST00000538995 TMEM171Q8WVE6 324 aa10.19□□□□□ -0.78
RTN3-209ENST00000538995 AKAP1Q92667 903 aaKnown RBP eCLIP10.19□□□□□ -0.78
RTN3-209ENST00000538995 PTDSS2Q9BVG9 487 aa10.19□□□□□ -0.78
RTN3-209ENST00000538995 TMEM120AQ9BXJ8 343 aa10.19□□□□□ -0.78
RTN3-209ENST00000538995 CXorf56Q9H5V9 222 aa10.19□□□□□ -0.78
RTN3-209ENST00000538995 ADPRHL2Q9NX46 363 aa10.19□□□□□ -0.78
RTN3-209ENST00000538995 SLC13A4Q9UKG4 626 aa10.19□□□□□ -0.78
RTN3-209ENST00000538995 RASD1Q9Y272 281 aa10.19□□□□□ -0.78
RTN3-209ENST00000538995 FREM1Q5H8C1 2179 aa10.19□□□□□ -0.78
RTN3-209ENST00000538995 RAI1Q7Z5J4 1906 aaPredicted RBP10.19□□□□□ -0.78
RTN3-209ENST00000538995 A0A1B0GWA3 101 aa10.18□□□□□ -0.78
RTN3-209ENST00000538995 CIB4A0PJX0 185 aa10.18□□□□□ -0.78
RTN3-209ENST00000538995 CCT8L1PA6NM43 557 aa10.18□□□□□ -0.78
RTN3-209ENST00000538995 FTCDNL1E5RQL4 147 aa10.18□□□□□ -0.78
RTN3-209ENST00000538995 CLOCKO15516 846 aa10.18□□□□□ -0.78
RTN3-209ENST00000538995 OR2T1O43869 369 aa10.18□□□□□ -0.78
RTN3-209ENST00000538995 FMO6PO60774 539 aa10.18□□□□□ -0.78
RTN3-209ENST00000538995 RAD51DO75771 328 aa10.18□□□□□ -0.78
RTN3-209ENST00000538995 MFN2O95140 757 aa10.18□□□□□ -0.78
RTN3-209ENST00000538995 PLAUP00749 431 aa10.18□□□□□ -0.78
RTN3-209ENST00000538995 IGHV3-9P01782 118 aa10.18□□□□□ -0.78
RTN3-209ENST00000538995 ITGA5P08648 1049 aa10.18□□□□□ -0.78
RTN3-209ENST00000538995 HTR2AP28223 471 aa10.18□□□□□ -0.78
RTN3-209ENST00000538995 GTF2E2P29084 291 aaKnown RBP10.18□□□□□ -0.78
RTN3-209ENST00000538995 PCGF2P35227 344 aa10.18□□□□□ -0.78
RTN3-209ENST00000538995 RGS8P57771 180 aaPredicted RBP10.18□□□□□ -0.78
RTN3-209ENST00000538995 MTPNP58546 118 aa10.18□□□□□ -0.78
RTN3-209ENST00000538995 HOXC5Q00444 222 aa10.18□□□□□ -0.78
RTN3-209ENST00000538995 EGR4Q05215 589 aa10.18□□□□□ -0.78
RTN3-209ENST00000538995 BSPH1Q075Z2 132 aa10.18□□□□□ -0.78
RTN3-209ENST00000538995 FAPQ12884 760 aa10.18□□□□□ -0.78
RTN3-209ENST00000538995 MFSD13AQ14CX5 517 aa10.18□□□□□ -0.78
RTN3-209ENST00000538995 TRMT5Q32P41 509 aaKnown RBP10.18□□□□□ -0.78
RTN3-209ENST00000538995 ZNF672Q499Z4 452 aaPredicted RBP10.18□□□□□ -0.78
RTN3-209ENST00000538995 FAM69AQ5T7M9 428 aa10.18□□□□□ -0.78
RTN3-209ENST00000538995 TMEM225Q6GV28 225 aa10.18□□□□□ -0.78
RTN3-209ENST00000538995 ALKBH2Q6NS38 261 aa10.18□□□□□ -0.78
RTN3-209ENST00000538995 ULK3Q6PHR2 472 aa10.18□□□□□ -0.78
RTN3-209ENST00000538995 COMTD1Q86VU5 262 aa10.18□□□□□ -0.78
RTN3-209ENST00000538995 RANBP3LQ86VV4 465 aaPredicted RBP10.18□□□□□ -0.78
RTN3-209ENST00000538995 PTOV1Q86YD1 416 aa10.18□□□□□ -0.78
RTN3-209ENST00000538995 ZIC4Q8N9L1 334 aa10.18□□□□□ -0.78
RTN3-209ENST00000538995 OR52E4Q8NGH9 312 aa10.18□□□□□ -0.78
RTN3-209ENST00000538995 OR6S1Q8NH40 331 aa10.18□□□□□ -0.78
RTN3-209ENST00000538995 SLC38A4Q969I6 547 aa10.18□□□□□ -0.78
RTN3-209ENST00000538995 FBXW5Q969U6 566 aa10.18□□□□□ -0.78
RTN3-209ENST00000538995 BOD1Q96IK1 185 aa10.18□□□□□ -0.78
RTN3-209ENST00000538995 RADILQ96JH8 1075 aa10.18□□□□□ -0.78
RTN3-209ENST00000538995 MUS81Q96NY9 551 aa10.18□□□□□ -0.78
RTN3-209ENST00000538995 RSPO3Q9BXY4 272 aaPredicted RBP10.18□□□□□ -0.78
RTN3-209ENST00000538995 SLCO5A1Q9H2Y9 848 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms