RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 MIEF1Q9NQG6 463 aa6.17□□□□□ -1.42
USP28-207ENST00000538475 SLC17A5Q9NRA2 495 aa6.17□□□□□ -1.42
USP28-207ENST00000538475 CA10Q9NS85 328 aa6.17□□□□□ -1.42
USP28-207ENST00000538475 COMMD9Q9P000 198 aa6.17□□□□□ -1.42
USP28-207ENST00000538475 RHCGQ9UBD6 479 aa6.17□□□□□ -1.42
USP28-207ENST00000538475 LHX3Q9UBR4 397 aa6.17□□□□□ -1.42
USP28-207ENST00000538475 MIOXQ9UGB7 285 aa6.17□□□□□ -1.42
USP28-207ENST00000538475 ADAM29Q9UKF5 820 aa6.17□□□□□ -1.42
USP28-207ENST00000538475 TNFSF18Q9UNG2 199 aa6.17□□□□□ -1.42
USP28-207ENST00000538475 RCE1Q9Y256 329 aa6.17□□□□□ -1.42
USP28-207ENST00000538475 PLEKHM1Q9Y4G2 1056 aa6.17□□□□□ -1.42
USP28-207ENST00000538475 IRAK3Q9Y616 596 aa6.17□□□□□ -1.42
USP28-207ENST00000538475 PRSS21Q9Y6M0 314 aa6.17□□□□□ -1.42
USP28-207ENST00000538475 A0A087WUU8 490 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 A0A1B0GTI1 187 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 LOC390937A0A1W2PQ73 354 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 MEX3AA1L020 520 aaKnown RBP6.16□□□□□ -1.42
USP28-207ENST00000538475 GGT3PA6NGU5 568 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 ARL5CA6NH57 179 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 COLCA2A8K830 154 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 F8VVB4 439 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 F8VWA3 439 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 H7C417 338 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 M0QZ92 97 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 KIAA0355O15063 1070 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 NPC1O15118 1278 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 GPR39O43194 453 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 SEMA7AO75326 666 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 ZNF821O75541 412 aaPredicted RBP6.16□□□□□ -1.42
USP28-207ENST00000538475 RBBP9O75884 186 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 RCBTB2O95199 551 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 FGBP02675 491 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 BCHEP06276 602 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 SYPP08247 313 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 CHRM5P08912 532 aaPredicted RBP6.16□□□□□ -1.42
USP28-207ENST00000538475 HOXC4P09017 264 aaPredicted RBP6.16□□□□□ -1.42
USP28-207ENST00000538475 ZNF286BP0CG31 522 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 RCC1P18754 421 aaPredicted RBP6.16□□□□□ -1.42
USP28-207ENST00000538475 ATF1P18846 271 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 CD22P20273 847 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 VAMP1P23763 118 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 HOXA6P31267 233 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 MAS1LP35410 378 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 SOAT1P35610 550 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 OMPP47874 163 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 KHKP50053 298 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 RGS8P57771 180 aaPredicted RBP6.16□□□□□ -1.42
USP28-207ENST00000538475 RAB2AP61019 212 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 UBE2IP63279 158 aaKnown RBP6.16□□□□□ -1.42
USP28-207ENST00000538475 EEF1A1P68104 462 aaKnown RBP6.16□□□□□ -1.42
USP28-207ENST00000538475 BLOC1S1P78537 153 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 PRR5P85299 388 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 PJVKQ0ZLH3 352 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 CRHR2Q13324 411 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 NAE1Q13564 534 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 ZXDCQ2QGD7 858 aaPredicted RBP6.16□□□□□ -1.42
USP28-207ENST00000538475 ZNF791Q3KP31 576 aaPredicted RBP6.16□□□□□ -1.42
USP28-207ENST00000538475 LINC00303Q3SY05 128 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 SPDYE7PQ495Y7 208 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 ZNF805Q5CZA5 627 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 C10orf120Q5SQS8 335 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 PRAMEF19Q5SWL8 479 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 SPOUT1Q5T280 376 aaKnown RBP6.16□□□□□ -1.42
USP28-207ENST00000538475 EEF1A1P5Q5VTE0 462 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 TMEM244Q5VVB8 128 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 H3F3CQ6NXT2 135 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 JMJD6Q6NYC1 403 aaPredicted RBP6.16□□□□□ -1.42
USP28-207ENST00000538475 NIPAL3Q6P499 406 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 RPL22L1Q6P5R6 122 aaKnown RBP6.16□□□□□ -1.42
USP28-207ENST00000538475 AGTRAPQ6RW13 159 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 ENPP7Q6UWV6 458 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 FAM151BQ6UXP7 276 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 MBOAT1Q6ZNC8 495 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 ZNF620Q6ZNG0 422 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 TPRG1Q6ZUI0 275 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 TMPRSS11FQ6ZWK6 438 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 TMPRSS9Q7Z410 1059 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 COMMD6Q7Z4G1 85 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 C6orf120Q7Z4R8 191 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.16□□□□□ -1.42
USP28-207ENST00000538475 CMTM4Q8IZR5 234 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 COMMD1Q8N668 190 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 ARL6IP6Q8N6S5 226 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 ZFP41Q8N8Y5 198 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 RASGEF1AQ8N9B8 481 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 SLC30A7Q8NEW0 376 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 OR4K1Q8NGD4 311 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 OR52I2Q8NH67 350 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 RPS4Y2Q8TD47 263 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 RXFP4Q8TDU9 374 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 SMPDL3AQ92484 453 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 MIB2Q96AX9 1013 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 HAVCR1Q96D42 359 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 PGLYRP3Q96LB9 341 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 MS4A4EQ96PG1 132 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 ARHGDIGQ99819 225 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 IER2Q9BTL4 223 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 ZNF426Q9BUY5 554 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 BOCQ9BWV1 1114 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 KATNBL1Q9H079 304 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms