RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 HES3Q5TGS1 186 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 SFRP4Q6FHJ7 346 aaPredicted RBP4.95□□□□□ -1.62
LRP6-203ENST00000538239 FRMPD2BQ6IN97 320 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 LILRA6Q6PI73 481 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 C6orf89Q6UWU4 347 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 TRILQ7L0X0 811 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 NAXDQ8IW45 347 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 SERPINA12Q8IW75 414 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 SLC16A11Q8NCK7 471 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 OR4F15Q8NGB8 312 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 OR5M9Q8NGP3 310 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 PFN4Q8NHR9 129 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 RSPRY1Q96DX4 576 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 PRRX2Q99811 253 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 C20orf27Q9GZN8 174 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 LANCL2Q9NS86 450 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 EDARQ9UNE0 448 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 PROCRQ9UNN8 238 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 ATAD5Q96QE3 1844 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 OR2W5A6NFC9 320 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 FGF17O60258 216 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 ICOSLGO75144 302 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 DNAJB5O75953 348 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 NSA2O95478 260 aaKnown RBP4.95□□□□□ -1.62
LRP6-203ENST00000538239 ITGB2P05107 769 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 CR2P20023 1033 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 ARNTP27540 789 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 DUSP5Q16690 384 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 GLYR1Q49A26 553 aaPredicted RBP4.95□□□□□ -1.62
LRP6-203ENST00000538239 TMEM244Q5VVB8 128 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 BAIAP2L2Q6UXY1 529 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 ITFG2Q969R8 447 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 GORASP2Q9H8Y8 452 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 OLAHQ9NV23 265 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 COL4A5P29400 1685 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 A0A1W2PR48 441 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 HEXAP06865 529 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 CHRNB4P30926 498 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 PLEKHN1Q494U1 663 aaPredicted RBP4.95□□□□□ -1.62
LRP6-203ENST00000538239 PRSS36Q5K4E3 855 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 ESPNLQ6ZVH7 1005 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 SPRED2Q7Z698 418 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 GLB1L2Q8IW92 636 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 PM20D2Q8IYS1 436 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 TP53I13Q8NBR0 393 aaPredicted RBP4.95□□□□□ -1.62
LRP6-203ENST00000538239 COQ8AQ8NI60 647 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 SYNPRQ8TBG9 265 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 SLC17A4Q9Y2C5 497 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 HSPE1-MOB4S4R3N1 261 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 B4DXG7 233 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 H0YIG0 161 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 TNFSF12O43508 249 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 FOXD2O60548 495 aaPredicted RBP4.95□□□□□ -1.62
LRP6-203ENST00000538239 SEC14L2O76054 403 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 IFNA5P01569 189 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 PTAFRP25105 342 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 TSFMP43897 325 aaKnown RBP4.95□□□□□ -1.62
LRP6-203ENST00000538239 PTH2RP49190 550 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 RGS19P49795 217 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 EFNA3P52797 238 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 CXADRP78310 365 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 SIGLEC14Q08ET2 396 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 FAM71E1Q6IPT2 247 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 COMTD1Q86VU5 262 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 ZNF695Q8IW36 515 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 GOLM1Q8NBJ4 401 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 SCCPDHQ8NBX0 429 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 PSMF1Q92530 271 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 COG8Q96MW5 612 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 TREM1Q9NP99 234 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 A4GALTQ9NPC4 353 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 ACOT13Q9NPJ3 140 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 ZNF71Q9NQZ8 489 aaPredicted RBP4.95□□□□□ -1.62
LRP6-203ENST00000538239 B3GNT3Q9Y2A9 372 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 PCDHGA10Q9Y5H3 936 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 ATG12O94817 140 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 PET100P0DJ07 73 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 DUSP2Q05923 314 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 GAB1Q13480 694 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 PCGF3Q3KNV8 242 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 RNASE10Q5GAN6 216 aaKnown RBP4.95□□□□□ -1.62
LRP6-203ENST00000538239 C1orf140Q5VVS0 124 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 SLC22A25Q6T423 547 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 MBOAT2Q6ZWT7 520 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 SLC46A3Q7Z3Q1 461 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 GDF7Q7Z4P5 450 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 BATF2Q8N1L9 274 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 OR5J2Q8NH18 312 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.95□□□□□ -1.62
LRP6-203ENST00000538239 LYSMD1Q96S90 227 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 NMNAT3Q96T66 252 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 MED18Q9BUE0 208 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 PPP1R14DQ9NXH3 145 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 LHX6Q9UPM6 363 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 ST14Q9Y5Y6 855 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 SDK1Q7Z5N4 2213 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 A0A087WUU8 490 aa4.95□□□□□ -1.62
LRP6-203ENST00000538239 A0A1W2PNR3 127 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms