RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 ANKRD27Q96NW4 1050 aa11.01□□□□□ -0.65
PRKDC-207ENST00000536483 TMEM204Q9BSN7 226 aa11.01□□□□□ -0.65
PRKDC-207ENST00000536483 IKZF5Q9H5V7 419 aa11.01□□□□□ -0.65
PRKDC-207ENST00000536483 DCTN4Q9UJW0 460 aa11.01□□□□□ -0.65
PRKDC-207ENST00000536483 LAMP3Q9UQV4 416 aa11.01□□□□□ -0.65
PRKDC-207ENST00000536483 A0A0G2JND7 137 aa11□□□□□ -0.65
PRKDC-207ENST00000536483 TMEM72A0PK05 275 aa11□□□□□ -0.65
PRKDC-207ENST00000536483 EVPLLA8MZ36 301 aa11□□□□□ -0.65
PRKDC-207ENST00000536483 TMEM229AB2RXF0 380 aa11□□□□□ -0.65
PRKDC-207ENST00000536483 TMCC2O75069 709 aa11□□□□□ -0.65
PRKDC-207ENST00000536483 CRLF1O75462 422 aa11□□□□□ -0.65
PRKDC-207ENST00000536483 NPPAP01160 153 aa11□□□□□ -0.65
PRKDC-207ENST00000536483 GKN3PP0CG01 181 aa11□□□□□ -0.65
PRKDC-207ENST00000536483 IMPDH2P12268 514 aa11□□□□□ -0.65
PRKDC-207ENST00000536483 COX5AP20674 150 aa11□□□□□ -0.65
PRKDC-207ENST00000536483 PCBP3P57721 371 aaKnown RBP11□□□□□ -0.65
PRKDC-207ENST00000536483 SLC35A1P78382 337 aa11□□□□□ -0.65
PRKDC-207ENST00000536483 KRTAP1-1Q07627 177 aa11□□□□□ -0.65
PRKDC-207ENST00000536483 ITGADQ13349 1161 aa11□□□□□ -0.65
PRKDC-207ENST00000536483 C1QTNF12Q5T7M4 302 aa11□□□□□ -0.65
PRKDC-207ENST00000536483 PAQR6Q6TCH4 344 aa11□□□□□ -0.65
PRKDC-207ENST00000536483 ATG4DQ86TL0 474 aaPredicted RBP11□□□□□ -0.65
PRKDC-207ENST00000536483 MAPK1IP1LQ8NDC0 245 aa11□□□□□ -0.65
PRKDC-207ENST00000536483 SPATA3Q8NHX4 192 aa11□□□□□ -0.65
PRKDC-207ENST00000536483 STK35Q8TDR2 534 aa11□□□□□ -0.65
PRKDC-207ENST00000536483 C3orf49Q96BT1 292 aa11□□□□□ -0.65
PRKDC-207ENST00000536483 CGREF1Q99674 301 aa11□□□□□ -0.65
PRKDC-207ENST00000536483 SPATA5L1Q9BVQ7 753 aa11□□□□□ -0.65
PRKDC-207ENST00000536483 REPIN1Q9BWE0 567 aaKnown RBP11□□□□□ -0.65
PRKDC-207ENST00000536483 OR11A1Q9GZK7 315 aa11□□□□□ -0.65
PRKDC-207ENST00000536483 C12orf49Q9H741 205 aa11□□□□□ -0.65
PRKDC-207ENST00000536483 EMC3Q9P0I2 261 aa11□□□□□ -0.65
PRKDC-207ENST00000536483 CUBNO60494 3623 aa10.99□□□□□ -0.65
PRKDC-207ENST00000536483 IGHV3-15A0A0B4J1V0 119 aa10.99□□□□□ -0.65
PRKDC-207ENST00000536483 PRORSD1PA6NEY8 169 aa10.99□□□□□ -0.65
PRKDC-207ENST00000536483 LIPT2A6NK58 231 aa10.99□□□□□ -0.65
PRKDC-207ENST00000536483 A8MVM7 634 aa10.99□□□□□ -0.65
PRKDC-207ENST00000536483 C5orf58C9J3I9 102 aa10.99□□□□□ -0.65
PRKDC-207ENST00000536483 RNF223E7ERA6 249 aa10.99□□□□□ -0.65
PRKDC-207ENST00000536483 VIMP08670 466 aaKnown RBP10.99□□□□□ -0.65
PRKDC-207ENST00000536483 TROVE2P10155 538 aaKnown RBP eCLIP10.99□□□□□ -0.65
PRKDC-207ENST00000536483 TFPIP10646 304 aa10.99□□□□□ -0.65
PRKDC-207ENST00000536483 PRG2P13727 222 aa10.99□□□□□ -0.65
PRKDC-207ENST00000536483 CXCR1P25024 350 aa10.99□□□□□ -0.65
PRKDC-207ENST00000536483 NTF4P34130 210 aa10.99□□□□□ -0.65
PRKDC-207ENST00000536483 COPZ1P61923 177 aa10.99□□□□□ -0.65
PRKDC-207ENST00000536483 RPS4XP62701 263 aaKnown RBP10.99□□□□□ -0.65
PRKDC-207ENST00000536483 SLC17A1Q14916 467 aa10.99□□□□□ -0.65
PRKDC-207ENST00000536483 CLEC12BQ2HXU8 276 aa10.99□□□□□ -0.65
PRKDC-207ENST00000536483 CGB2Q6NT52 195 aa10.99□□□□□ -0.65
PRKDC-207ENST00000536483 DHDDSQ86SQ9 333 aa10.99□□□□□ -0.65
PRKDC-207ENST00000536483 SERPINA11Q86U17 422 aa10.99□□□□□ -0.65
PRKDC-207ENST00000536483 KRT73Q86Y46 540 aa10.99□□□□□ -0.65
PRKDC-207ENST00000536483 PTOV1Q86YD1 416 aa10.99□□□□□ -0.65
PRKDC-207ENST00000536483 HIPK4Q8NE63 616 aa10.99□□□□□ -0.65
PRKDC-207ENST00000536483 HSD17B8Q92506 261 aa10.99□□□□□ -0.65
PRKDC-207ENST00000536483 S100PBPQ96BU1 408 aa10.99□□□□□ -0.65
PRKDC-207ENST00000536483 BOD1Q96IK1 185 aa10.99□□□□□ -0.65
PRKDC-207ENST00000536483 ZNF300Q96RE9 604 aaPredicted RBP10.99□□□□□ -0.65
PRKDC-207ENST00000536483 SF3B5Q9BWJ5 86 aaKnown RBP10.99□□□□□ -0.65
PRKDC-207ENST00000536483 TMEM120AQ9BXJ8 343 aa10.99□□□□□ -0.65
PRKDC-207ENST00000536483 KAT8Q9H7Z6 458 aaKnown RBP10.99□□□□□ -0.65
PRKDC-207ENST00000536483 CACYBPQ9HB71 228 aaKnown RBP10.99□□□□□ -0.65
PRKDC-207ENST00000536483 RRP15Q9Y3B9 282 aaKnown RBP10.99□□□□□ -0.65
PRKDC-207ENST00000536483 ZC3H12DA2A288 527 aaKnown RBP10.98□□□□□ -0.65
PRKDC-207ENST00000536483 FBP2O00757 339 aa10.98□□□□□ -0.65
PRKDC-207ENST00000536483 ANGPT2O15123 496 aa10.98□□□□□ -0.65
PRKDC-207ENST00000536483 SLC22A2O15244 555 aa10.98□□□□□ -0.65
PRKDC-207ENST00000536483 SERPINB7O75635 380 aa10.98□□□□□ -0.65
PRKDC-207ENST00000536483 MFN2O95140 757 aa10.98□□□□□ -0.65
PRKDC-207ENST00000536483 VAMP5O95183 116 aa10.98□□□□□ -0.65
PRKDC-207ENST00000536483 C8BP07358 591 aa10.98□□□□□ -0.65
PRKDC-207ENST00000536483 SLC6A2P23975 617 aa10.98□□□□□ -0.65
PRKDC-207ENST00000536483 EDNRAP25101 427 aa10.98□□□□□ -0.65
PRKDC-207ENST00000536483 GZMMP51124 257 aa10.98□□□□□ -0.65
PRKDC-207ENST00000536483 P2RY4P51582 365 aa10.98□□□□□ -0.65
PRKDC-207ENST00000536483 SCARB2Q14108 478 aa10.98□□□□□ -0.65
PRKDC-207ENST00000536483 VEZF1Q14119 521 aa10.98□□□□□ -0.65
PRKDC-207ENST00000536483 TSC22D1Q15714 1073 aa10.98□□□□□ -0.65
PRKDC-207ENST00000536483 ADAM5Q6NVV9 412 aa10.98□□□□□ -0.65
PRKDC-207ENST00000536483 C5orf46Q6UWT4 87 aa10.98□□□□□ -0.65
PRKDC-207ENST00000536483 SEZ6L2Q6UXD5 910 aa10.98□□□□□ -0.65
PRKDC-207ENST00000536483 P2RY8Q86VZ1 359 aa10.98□□□□□ -0.65
PRKDC-207ENST00000536483 SLC30A8Q8IWU4 369 aa10.98□□□□□ -0.65
PRKDC-207ENST00000536483 LILRB1Q8NHL6 650 aaPredicted RBP10.98□□□□□ -0.65
PRKDC-207ENST00000536483 NFKBIDQ8NI38 313 aa10.98□□□□□ -0.65
PRKDC-207ENST00000536483 TMEM45BQ96B21 275 aa10.98□□□□□ -0.65
PRKDC-207ENST00000536483 THOC1Q96FV9 657 aaKnown RBP10.98□□□□□ -0.65
PRKDC-207ENST00000536483 ZNF607Q96SK3 696 aa10.98□□□□□ -0.65
PRKDC-207ENST00000536483 NAA11Q9BSU3 229 aaPredicted RBP10.98□□□□□ -0.65
PRKDC-207ENST00000536483 SAR1AQ9NR31 198 aa10.98□□□□□ -0.65
PRKDC-207ENST00000536483 FGFR1OP2Q9NVK5 253 aa10.98□□□□□ -0.65
PRKDC-207ENST00000536483 MALT1Q9UDY8 824 aa10.98□□□□□ -0.65
PRKDC-207ENST00000536483 STAB1Q9NY15 2570 aa10.98□□□□□ -0.65
PRKDC-207ENST00000536483 ABCA1O95477 2261 aa10.97□□□□□ -0.65
PRKDC-207ENST00000536483 AQP7P3A6NL99 342 aa10.97□□□□□ -0.65
PRKDC-207ENST00000536483 FTCDNL1E5RQL4 147 aa10.97□□□□□ -0.65
PRKDC-207ENST00000536483 OVOL3O00110 214 aa10.97□□□□□ -0.65
PRKDC-207ENST00000536483 PDLIM1O00151 329 aa10.97□□□□□ -0.65
PRKDC-207ENST00000536483 CLOCKO15516 846 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms