RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 ELOA3BQ3SY89 546 aa12.59□□□□□ -0.39
UBE3B-206ENST00000536398 BEX5Q5H9J7 111 aa12.59□□□□□ -0.39
UBE3B-206ENST00000536398 FBXW9Q5XUX1 488 aa12.59□□□□□ -0.39
UBE3B-206ENST00000536398 C6orf89Q6UWU4 347 aa12.59□□□□□ -0.39
UBE3B-206ENST00000536398 CASP12Q6UXS9 341 aa12.59□□□□□ -0.39
UBE3B-206ENST00000536398 GPAT4Q86UL3 456 aa12.59□□□□□ -0.39
UBE3B-206ENST00000536398 RBM45Q8IUH3 476 aaKnown RBP12.59□□□□□ -0.39
UBE3B-206ENST00000536398 KDM8Q8N371 416 aa12.59□□□□□ -0.39
UBE3B-206ENST00000536398 ZNF433Q8N7K0 673 aaPredicted RBP12.59□□□□□ -0.39
UBE3B-206ENST00000536398 LSMEM1Q8N8F7 131 aa12.59□□□□□ -0.39
UBE3B-206ENST00000536398 ELOA3Q8NG57 546 aa12.59□□□□□ -0.39
UBE3B-206ENST00000536398 OR4D11Q8NGI4 311 aa12.59□□□□□ -0.39
UBE3B-206ENST00000536398 STK35Q8TDR2 534 aa12.59□□□□□ -0.39
UBE3B-206ENST00000536398 C10orf82Q8WW14 230 aa12.59□□□□□ -0.39
UBE3B-206ENST00000536398 HSD17B8Q92506 261 aa12.59□□□□□ -0.39
UBE3B-206ENST00000536398 SLC25A36Q96CQ1 311 aa12.59□□□□□ -0.39
UBE3B-206ENST00000536398 LRRC58Q96CX6 371 aa12.59□□□□□ -0.39
UBE3B-206ENST00000536398 TAPBPLQ9BX59 468 aa12.59□□□□□ -0.39
UBE3B-206ENST00000536398 KLHL14Q9P2G3 628 aa12.59□□□□□ -0.39
UBE3B-206ENST00000536398 RPS6KB2Q9UBS0 482 aa12.59□□□□□ -0.39
UBE3B-206ENST00000536398 SEC14L4Q9UDX3 406 aa12.59□□□□□ -0.39
UBE3B-206ENST00000536398 PRDM4Q9UKN5 801 aa12.59□□□□□ -0.39
UBE3B-206ENST00000536398 PRORSD1PA6NEY8 169 aa12.58□□□□□ -0.4
UBE3B-206ENST00000536398 MRASO14807 208 aa12.58□□□□□ -0.4
UBE3B-206ENST00000536398 LGI1O95970 557 aa12.58□□□□□ -0.4
UBE3B-206ENST00000536398 COX5AP20674 150 aa12.58□□□□□ -0.4
UBE3B-206ENST00000536398 CRYBA2P53672 197 aa12.58□□□□□ -0.4
UBE3B-206ENST00000536398 RGS8P57771 180 aaPredicted RBP12.58□□□□□ -0.4
UBE3B-206ENST00000536398 LGALS3BPQ08380 585 aa12.58□□□□□ -0.4
UBE3B-206ENST00000536398 RBBP4Q09028 425 aa12.58□□□□□ -0.4
UBE3B-206ENST00000536398 FAPQ12884 760 aa12.58□□□□□ -0.4
UBE3B-206ENST00000536398 OR1Q1Q15612 314 aa12.58□□□□□ -0.4
UBE3B-206ENST00000536398 NPTX1Q15818 432 aa12.58□□□□□ -0.4
UBE3B-206ENST00000536398 ACKR1Q16570 336 aa12.58□□□□□ -0.4
UBE3B-206ENST00000536398 TRMT5Q32P41 509 aaKnown RBP12.58□□□□□ -0.4
UBE3B-206ENST00000536398 ALG10BQ5I7T1 473 aa12.58□□□□□ -0.4
UBE3B-206ENST00000536398 TSPO2Q5TGU0 170 aa12.58□□□□□ -0.4
UBE3B-206ENST00000536398 C9orf135Q5VTT2 229 aa12.58□□□□□ -0.4
UBE3B-206ENST00000536398 ZNF704Q6ZNC4 412 aaPredicted RBP12.58□□□□□ -0.4
UBE3B-206ENST00000536398 CALHM3Q86XJ0 350 aa12.58□□□□□ -0.4
UBE3B-206ENST00000536398 POU5F2Q8N7G0 328 aa12.58□□□□□ -0.4
UBE3B-206ENST00000536398 RNF217Q8TC41 542 aa12.58□□□□□ -0.4
UBE3B-206ENST00000536398 NEUROG1Q92886 237 aa12.58□□□□□ -0.4
UBE3B-206ENST00000536398 TAAR8Q969N4 342 aa12.58□□□□□ -0.4
UBE3B-206ENST00000536398 TAMM41Q96BW9 452 aa12.58□□□□□ -0.4
UBE3B-206ENST00000536398 TMEM204Q9BSN7 226 aa12.58□□□□□ -0.4
UBE3B-206ENST00000536398 TRIM2Q9C040 744 aa12.58□□□□□ -0.4
UBE3B-206ENST00000536398 SLC7A10Q9NS82 523 aa12.58□□□□□ -0.4
UBE3B-206ENST00000536398 EDARQ9UNE0 448 aa12.58□□□□□ -0.4
UBE3B-206ENST00000536398 A0A1W2PR80 420 aa12.57□□□□□ -0.4
UBE3B-206ENST00000536398 DPRXA6NFQ7 191 aa12.57□□□□□ -0.4
UBE3B-206ENST00000536398 PDLIM1O00151 329 aa12.57□□□□□ -0.4
UBE3B-206ENST00000536398 RAD51DO75771 328 aa12.57□□□□□ -0.4
UBE3B-206ENST00000536398 AHSA1O95433 338 aa12.57□□□□□ -0.4
UBE3B-206ENST00000536398 CNOT4O95628 575 aaKnown RBP12.57□□□□□ -0.4
UBE3B-206ENST00000536398 ITGA5P08648 1049 aa12.57□□□□□ -0.4
UBE3B-206ENST00000536398 PNMTP11086 282 aa12.57□□□□□ -0.4
UBE3B-206ENST00000536398 GGT1P19440 569 aa12.57□□□□□ -0.4
UBE3B-206ENST00000536398 CD247P20963 164 aa12.57□□□□□ -0.4
UBE3B-206ENST00000536398 CBLP22681 906 aa12.57□□□□□ -0.4
UBE3B-206ENST00000536398 PCGF2P35227 344 aa12.57□□□□□ -0.4
UBE3B-206ENST00000536398 CDH12P55289 794 aa12.57□□□□□ -0.4
UBE3B-206ENST00000536398 LTBQ06643 244 aa12.57□□□□□ -0.4
UBE3B-206ENST00000536398 CYLC2Q14093 348 aaPredicted RBP12.57□□□□□ -0.4
UBE3B-206ENST00000536398 VMACQ2NL98 169 aa12.57□□□□□ -0.4
UBE3B-206ENST00000536398 MMEL1Q495T6 779 aa12.57□□□□□ -0.4
UBE3B-206ENST00000536398 TMEM225Q6GV28 225 aa12.57□□□□□ -0.4
UBE3B-206ENST00000536398 EPHX4Q8IUS5 362 aa12.57□□□□□ -0.4
UBE3B-206ENST00000536398 LILRB1Q8NHL6 650 aaPredicted RBP12.57□□□□□ -0.4
UBE3B-206ENST00000536398 MFSD8Q8NHS3 518 aa12.57□□□□□ -0.4
UBE3B-206ENST00000536398 ALPK1Q96QP1 1244 aa12.57□□□□□ -0.4
UBE3B-206ENST00000536398 ARHGDIGQ99819 225 aa12.57□□□□□ -0.4
UBE3B-206ENST00000536398 SF3B5Q9BWJ5 86 aaKnown RBP12.57□□□□□ -0.4
UBE3B-206ENST00000536398 GMPR2Q9P2T1 348 aaKnown RBP12.57□□□□□ -0.4
UBE3B-206ENST00000536398 TESQ9UGI8 421 aaKnown RBP12.57□□□□□ -0.4
UBE3B-206ENST00000536398 SLC13A4Q9UKG4 626 aa12.57□□□□□ -0.4
UBE3B-206ENST00000536398 SLC9A8Q9Y2E8 581 aa12.57□□□□□ -0.4
UBE3B-206ENST00000536398 ROS1P08922 2347 aa12.57□□□□□ -0.4
UBE3B-206ENST00000536398 A0A0B4J2E0 115 aa12.56□□□□□ -0.4
UBE3B-206ENST00000536398 A0A1B0GX12 115 aa12.56□□□□□ -0.4
UBE3B-206ENST00000536398 CIB4A0PJX0 185 aa12.56□□□□□ -0.4
UBE3B-206ENST00000536398 CCT8L1PA6NM43 557 aa12.56□□□□□ -0.4
UBE3B-206ENST00000536398 ATP8B1O43520 1251 aa12.56□□□□□ -0.4
UBE3B-206ENST00000536398 ADAM8P78325 824 aa12.56□□□□□ -0.4
UBE3B-206ENST00000536398 PPA1Q15181 289 aa12.56□□□□□ -0.4
UBE3B-206ENST00000536398 COQ5Q5HYK3 327 aa12.56□□□□□ -0.4
UBE3B-206ENST00000536398 NCMAPQ5T1S8 102 aa12.56□□□□□ -0.4
UBE3B-206ENST00000536398 ULK3Q6PHR2 472 aa12.56□□□□□ -0.4
UBE3B-206ENST00000536398 CREB3L2Q70SY1 520 aa12.56□□□□□ -0.4
UBE3B-206ENST00000536398 AAED1Q7RTV5 226 aa12.56□□□□□ -0.4
UBE3B-206ENST00000536398 TSPYL5Q86VY4 417 aaPredicted RBP12.56□□□□□ -0.4
UBE3B-206ENST00000536398 KRTAP1-3Q8IUG1 177 aa12.56□□□□□ -0.4
UBE3B-206ENST00000536398 BHLHE22Q8NFJ8 381 aaPredicted RBP12.56□□□□□ -0.4
UBE3B-206ENST00000536398 OR6T1Q8NGN1 323 aa12.56□□□□□ -0.4
UBE3B-206ENST00000536398 OR52N5Q8NH56 324 aa12.56□□□□□ -0.4
UBE3B-206ENST00000536398 VANGL1Q8TAA9 524 aaPredicted RBP12.56□□□□□ -0.4
UBE3B-206ENST00000536398 DNAJA4Q8WW22 397 aaPredicted RBP12.56□□□□□ -0.4
UBE3B-206ENST00000536398 SLC38A4Q969I6 547 aa12.56□□□□□ -0.4
UBE3B-206ENST00000536398 TMEM45BQ96B21 275 aa12.56□□□□□ -0.4
UBE3B-206ENST00000536398 RCN3Q96D15 328 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms