RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 CLNS1AP54105 237 aaKnown RBP11.31□□□□□ -0.6
TNFRSF1A-207ENST00000535958 COPZ1P61923 177 aa11.31□□□□□ -0.6
TNFRSF1A-207ENST00000535958 CEACAM7Q14002 265 aa11.31□□□□□ -0.6
TNFRSF1A-207ENST00000535958 TBRG1Q3YBR2 411 aa11.31□□□□□ -0.6
TNFRSF1A-207ENST00000535958 SAXO2Q658L1 398 aa11.31□□□□□ -0.6
TNFRSF1A-207ENST00000535958 ZNF440Q8IYI8 595 aa11.31□□□□□ -0.6
TNFRSF1A-207ENST00000535958 EIF1ADQ8N9N8 165 aaKnown RBP11.31□□□□□ -0.6
TNFRSF1A-207ENST00000535958 CNOT9Q92600 299 aaKnown RBP11.31□□□□□ -0.6
TNFRSF1A-207ENST00000535958 NEURL3Q96EH8 262 aa11.31□□□□□ -0.6
TNFRSF1A-207ENST00000535958 ALKBH3Q96Q83 286 aaPredicted RBP11.31□□□□□ -0.6
TNFRSF1A-207ENST00000535958 DYNLRB1Q9NP97 96 aa11.31□□□□□ -0.6
TNFRSF1A-207ENST00000535958 PCDHB14Q9Y5E9 798 aa11.31□□□□□ -0.6
TNFRSF1A-207ENST00000535958 SVEP1Q4LDE5 3571 aa11.31□□□□□ -0.6
TNFRSF1A-207ENST00000535958 AQP7P3A6NL99 342 aa11.3□□□□□ -0.6
TNFRSF1A-207ENST00000535958 AKR7A3O95154 331 aa11.3□□□□□ -0.6
TNFRSF1A-207ENST00000535958 VAMP5O95183 116 aa11.3□□□□□ -0.6
TNFRSF1A-207ENST00000535958 LGI1O95970 557 aa11.3□□□□□ -0.6
TNFRSF1A-207ENST00000535958 DBIP07108 87 aaKnown RBP11.3□□□□□ -0.6
TNFRSF1A-207ENST00000535958 IDH3GP51553 393 aaPredicted RBP11.3□□□□□ -0.6
TNFRSF1A-207ENST00000535958 TXNL4AP83876 142 aaKnown RBP11.3□□□□□ -0.6
TNFRSF1A-207ENST00000535958 FUT5Q11128 374 aa11.3□□□□□ -0.6
TNFRSF1A-207ENST00000535958 PRAMEF8Q5VWM4 474 aa11.3□□□□□ -0.6
TNFRSF1A-207ENST00000535958 PRAMEF7Q5VXH5 474 aa11.3□□□□□ -0.6
TNFRSF1A-207ENST00000535958 RNF130Q86XS8 419 aa11.3□□□□□ -0.6
TNFRSF1A-207ENST00000535958 CADM2Q8N3J6 435 aa11.3□□□□□ -0.6
TNFRSF1A-207ENST00000535958 TMEM99Q8N816 258 aa11.3□□□□□ -0.6
TNFRSF1A-207ENST00000535958 OR4F15Q8NGB8 312 aa11.3□□□□□ -0.6
TNFRSF1A-207ENST00000535958 OR1K1Q8NGR3 316 aa11.3□□□□□ -0.6
TNFRSF1A-207ENST00000535958 ZNF385AQ96PM9 386 aaKnown RBP11.3□□□□□ -0.6
TNFRSF1A-207ENST00000535958 ZNF317Q96PQ6 595 aaPredicted RBP11.3□□□□□ -0.6
TNFRSF1A-207ENST00000535958 TRNT1Q96Q11 434 aaKnown RBP11.3□□□□□ -0.6
TNFRSF1A-207ENST00000535958 PIF1Q9H611 641 aa11.3□□□□□ -0.6
TNFRSF1A-207ENST00000535958 ADPRHL2Q9NX46 363 aa11.3□□□□□ -0.6
TNFRSF1A-207ENST00000535958 ARFGEF3Q5TH69 2177 aa11.29□□□□□ -0.6
TNFRSF1A-207ENST00000535958 ZC3H12DA2A288 527 aaKnown RBP11.29□□□□□ -0.6
TNFRSF1A-207ENST00000535958 AGAP5A6NIR3 686 aa11.29□□□□□ -0.6
TNFRSF1A-207ENST00000535958 LIPT2A6NK58 231 aa11.29□□□□□ -0.6
TNFRSF1A-207ENST00000535958 E9PBE3 544 aa11.29□□□□□ -0.6
TNFRSF1A-207ENST00000535958 HMGN4O00479 90 aa11.29□□□□□ -0.6
TNFRSF1A-207ENST00000535958 FAAHO00519 579 aa11.29□□□□□ -0.6
TNFRSF1A-207ENST00000535958 BPGMP07738 259 aa11.29□□□□□ -0.6
TNFRSF1A-207ENST00000535958 MYZAPP0CAP1 466 aa11.29□□□□□ -0.6
TNFRSF1A-207ENST00000535958 NR2F1P10589 423 aa11.29□□□□□ -0.6
TNFRSF1A-207ENST00000535958 DAOP14920 347 aa11.29□□□□□ -0.6
TNFRSF1A-207ENST00000535958 NCF2P19878 526 aaPredicted RBP11.29□□□□□ -0.6
TNFRSF1A-207ENST00000535958 APEX1P27695 318 aaKnown RBP11.29□□□□□ -0.6
TNFRSF1A-207ENST00000535958 S100A3P33764 101 aa11.29□□□□□ -0.6
TNFRSF1A-207ENST00000535958 SH3BGRP55822 239 aaPredicted RBP11.29□□□□□ -0.6
TNFRSF1A-207ENST00000535958 NAAAQ02083 359 aa11.29□□□□□ -0.6
TNFRSF1A-207ENST00000535958 EPS8Q12929 822 aa11.29□□□□□ -0.6
TNFRSF1A-207ENST00000535958 EFNB3Q15768 340 aa11.29□□□□□ -0.6
TNFRSF1A-207ENST00000535958 GSTA3Q16772 222 aa11.29□□□□□ -0.6
TNFRSF1A-207ENST00000535958 MST1LQ2TV78 715 aa11.29□□□□□ -0.6
TNFRSF1A-207ENST00000535958 MRPL2Q5T653 305 aaKnown RBP11.29□□□□□ -0.6
TNFRSF1A-207ENST00000535958 NIPAL3Q6P499 406 aa11.29□□□□□ -0.6
TNFRSF1A-207ENST00000535958 UGT2A3Q6UWM9 527 aa11.29□□□□□ -0.6
TNFRSF1A-207ENST00000535958 LRRC74BQ6ZQY2 392 aa11.29□□□□□ -0.6
TNFRSF1A-207ENST00000535958 NUDCD3Q8IVD9 361 aa11.29□□□□□ -0.6
TNFRSF1A-207ENST00000535958 PEX5LQ8IYB4 626 aa11.29□□□□□ -0.6
TNFRSF1A-207ENST00000535958 KIRREL3Q8IZU9 778 aa11.29□□□□□ -0.6
TNFRSF1A-207ENST00000535958 NEU4Q8WWR8 484 aaPredicted RBP11.29□□□□□ -0.6
TNFRSF1A-207ENST00000535958 TESCQ96BS2 214 aa11.29□□□□□ -0.6
TNFRSF1A-207ENST00000535958 ZG16BQ96DA0 208 aa11.29□□□□□ -0.6
TNFRSF1A-207ENST00000535958 ANKRD27Q96NW4 1050 aa11.29□□□□□ -0.6
TNFRSF1A-207ENST00000535958 PANX1Q96RD7 426 aa11.29□□□□□ -0.6
TNFRSF1A-207ENST00000535958 ADAM19Q9H013 955 aa11.29□□□□□ -0.6
TNFRSF1A-207ENST00000535958 AKTIPQ9H8T0 292 aa11.29□□□□□ -0.6
TNFRSF1A-207ENST00000535958 A0A096LPE4 126 aa11.28□□□□□ -0.6
TNFRSF1A-207ENST00000535958 A0A1W2PPZ6 126 aa11.28□□□□□ -0.6
TNFRSF1A-207ENST00000535958 LRP5LA4QPB2 252 aa11.28□□□□□ -0.6
TNFRSF1A-207ENST00000535958 hCG_2039718K7EN88 272 aa11.28□□□□□ -0.6
TNFRSF1A-207ENST00000535958 STAMBPO95630 424 aa11.28□□□□□ -0.6
TNFRSF1A-207ENST00000535958 NPR2P20594 1047 aa11.28□□□□□ -0.6
TNFRSF1A-207ENST00000535958 ARRB2P32121 409 aa11.28□□□□□ -0.6
TNFRSF1A-207ENST00000535958 CAPZA2P47755 286 aa11.28□□□□□ -0.6
TNFRSF1A-207ENST00000535958 SELENOPP49908 381 aa11.28□□□□□ -0.6
TNFRSF1A-207ENST00000535958 TUBA1BP68363 451 aa11.28□□□□□ -0.6
TNFRSF1A-207ENST00000535958 TUBA4AP68366 448 aa11.28□□□□□ -0.6
TNFRSF1A-207ENST00000535958 SCGB2A2Q13296 93 aa11.28□□□□□ -0.6
TNFRSF1A-207ENST00000535958 ADIPOQQ15848 244 aa11.28□□□□□ -0.6
TNFRSF1A-207ENST00000535958 SYPL1Q16563 259 aa11.28□□□□□ -0.6
TNFRSF1A-207ENST00000535958 FAM174BQ3ZCQ3 159 aa11.28□□□□□ -0.6
TNFRSF1A-207ENST00000535958 LIN52Q52LA3 116 aa11.28□□□□□ -0.6
TNFRSF1A-207ENST00000535958 SPANXN4Q5MJ08 99 aa11.28□□□□□ -0.6
TNFRSF1A-207ENST00000535958 WBP2NLQ6ICG8 309 aa11.28□□□□□ -0.6
TNFRSF1A-207ENST00000535958 C12orf54Q6X4T0 127 aa11.28□□□□□ -0.6
TNFRSF1A-207ENST00000535958 TUBA1AQ71U36 451 aa11.28□□□□□ -0.6
TNFRSF1A-207ENST00000535958 SPATA21Q7Z572 469 aa11.28□□□□□ -0.6
TNFRSF1A-207ENST00000535958 ANKFN1Q8N957 763 aa11.28□□□□□ -0.6
TNFRSF1A-207ENST00000535958 LINC01356Q8N9X3 169 aa11.28□□□□□ -0.6
TNFRSF1A-207ENST00000535958 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.28□□□□□ -0.6
TNFRSF1A-207ENST00000535958 HPS1Q92902 700 aa11.28□□□□□ -0.6
TNFRSF1A-207ENST00000535958 SNX18Q96RF0 628 aa11.28□□□□□ -0.6
TNFRSF1A-207ENST00000535958 SLC38A1Q9H2H9 487 aa11.28□□□□□ -0.6
TNFRSF1A-207ENST00000535958 PLK3Q9H4B4 646 aa11.28□□□□□ -0.6
TNFRSF1A-207ENST00000535958 ARMC7Q9H6L4 198 aa11.28□□□□□ -0.6
TNFRSF1A-207ENST00000535958 MTHFD2LQ9H903 347 aaPredicted RBP11.28□□□□□ -0.6
TNFRSF1A-207ENST00000535958 TMEFF2Q9UIK5 374 aaPredicted RBP11.28□□□□□ -0.6
TNFRSF1A-207ENST00000535958 RASD1Q9Y272 281 aa11.28□□□□□ -0.6
TNFRSF1A-207ENST00000535958 A0A096LPI6 279 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms