RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 C6orf89Q6UWU4 347 aa12.38□□□□□ -0.43
SF3B2-215ENST00000534307 SSX8Q7RTT4 187 aa12.38□□□□□ -0.43
SF3B2-215ENST00000534307 TMEM99Q8N816 258 aa12.38□□□□□ -0.43
SF3B2-215ENST00000534307 SPATA3Q8NHX4 192 aa12.38□□□□□ -0.43
SF3B2-215ENST00000534307 NFKBIDQ8NI38 313 aa12.38□□□□□ -0.43
SF3B2-215ENST00000534307 TMEM45BQ96B21 275 aa12.38□□□□□ -0.43
SF3B2-215ENST00000534307 C18orf12Q96KH6 178 aa12.38□□□□□ -0.43
SF3B2-215ENST00000534307 AMBRA1Q9C0C7 1298 aa12.38□□□□□ -0.43
SF3B2-215ENST00000534307 TMEM38AQ9H6F2 299 aa12.38□□□□□ -0.43
SF3B2-215ENST00000534307 ARMC7Q9H6L4 198 aa12.38□□□□□ -0.43
SF3B2-215ENST00000534307 NGBQ9NPG2 151 aa12.38□□□□□ -0.43
SF3B2-215ENST00000534307 ASB6Q9NWX5 421 aa12.38□□□□□ -0.43
SF3B2-215ENST00000534307 TAS2R16Q9NYV7 291 aa12.38□□□□□ -0.43
SF3B2-215ENST00000534307 SLC9A8Q9Y2E8 581 aa12.38□□□□□ -0.43
SF3B2-215ENST00000534307 SONP18583 2426 aaKnown RBP12.38□□□□□ -0.43
SF3B2-215ENST00000534307 USF3Q68DE3 2245 aa12.37□□□□□ -0.43
SF3B2-215ENST00000534307 C5orf58C9J3I9 102 aa12.37□□□□□ -0.43
SF3B2-215ENST00000534307 RAD51DO75771 328 aa12.37□□□□□ -0.43
SF3B2-215ENST00000534307 AKR7A3O95154 331 aa12.37□□□□□ -0.43
SF3B2-215ENST00000534307 HEXAP06865 529 aa12.37□□□□□ -0.43
SF3B2-215ENST00000534307 CD3EP07766 207 aa12.37□□□□□ -0.43
SF3B2-215ENST00000534307 INHBBP09529 407 aa12.37□□□□□ -0.43
SF3B2-215ENST00000534307 DANCRP0C864 163 aa12.37□□□□□ -0.43
SF3B2-215ENST00000534307 HTR2AP28223 471 aa12.37□□□□□ -0.43
SF3B2-215ENST00000534307 PTH2RP49190 550 aa12.37□□□□□ -0.43
SF3B2-215ENST00000534307 EGR4Q05215 589 aa12.37□□□□□ -0.43
SF3B2-215ENST00000534307 FAPQ12884 760 aa12.37□□□□□ -0.43
SF3B2-215ENST00000534307 CAPRIN1Q14444 709 aaKnown RBP12.37□□□□□ -0.43
SF3B2-215ENST00000534307 OR7A5Q15622 319 aa12.37□□□□□ -0.43
SF3B2-215ENST00000534307 STK11Q15831 433 aa12.37□□□□□ -0.43
SF3B2-215ENST00000534307 GABRA6Q16445 453 aa12.37□□□□□ -0.43
SF3B2-215ENST00000534307 ZNF672Q499Z4 452 aaPredicted RBP12.37□□□□□ -0.43
SF3B2-215ENST00000534307 C1orf140Q5VVS0 124 aa12.37□□□□□ -0.43
SF3B2-215ENST00000534307 REEP3Q6NUK4 255 aa12.37□□□□□ -0.43
SF3B2-215ENST00000534307 DHRS4L2Q6PKH6 230 aa12.37□□□□□ -0.43
SF3B2-215ENST00000534307 CLEC9AQ6UXN8 241 aa12.37□□□□□ -0.43
SF3B2-215ENST00000534307 CASP12Q6UXS9 341 aa12.37□□□□□ -0.43
SF3B2-215ENST00000534307 RETREG3Q86VR2 466 aa12.37□□□□□ -0.43
SF3B2-215ENST00000534307 UBE2J2Q8N2K1 259 aa12.37□□□□□ -0.43
SF3B2-215ENST00000534307 DPP10Q8N608 796 aa12.37□□□□□ -0.43
SF3B2-215ENST00000534307 LSMEM1Q8N8F7 131 aa12.37□□□□□ -0.43
SF3B2-215ENST00000534307 OR9K2Q8NGE7 335 aa12.37□□□□□ -0.43
SF3B2-215ENST00000534307 OR52E4Q8NGH9 312 aa12.37□□□□□ -0.43
SF3B2-215ENST00000534307 STK35Q8TDR2 534 aa12.37□□□□□ -0.43
SF3B2-215ENST00000534307 THOC1Q96FV9 657 aaKnown RBP12.37□□□□□ -0.43
SF3B2-215ENST00000534307 PERPQ96FX8 193 aa12.37□□□□□ -0.43
SF3B2-215ENST00000534307 MUS81Q96NY9 551 aa12.37□□□□□ -0.43
SF3B2-215ENST00000534307 PTDSS2Q9BVG9 487 aa12.37□□□□□ -0.43
SF3B2-215ENST00000534307 SF3B5Q9BWJ5 86 aaKnown RBP12.37□□□□□ -0.43
SF3B2-215ENST00000534307 TRIM2Q9C040 744 aa12.37□□□□□ -0.43
SF3B2-215ENST00000534307 RABEP2Q9H5N1 569 aa12.37□□□□□ -0.43
SF3B2-215ENST00000534307 PIF1Q9H611 641 aa12.37□□□□□ -0.43
SF3B2-215ENST00000534307 SLC7A10Q9NS82 523 aa12.37□□□□□ -0.43
SF3B2-215ENST00000534307 SLC25A15Q9Y619 301 aa12.37□□□□□ -0.43
SF3B2-215ENST00000534307 ANK2Q01484 3957 aa12.37□□□□□ -0.43
SF3B2-215ENST00000534307 SHISA9B4DS77 424 aa12.36□□□□□ -0.43
SF3B2-215ENST00000534307 FTCDNL1E5RQL4 147 aa12.36□□□□□ -0.43
SF3B2-215ENST00000534307 OVOL3O00110 214 aa12.36□□□□□ -0.43
SF3B2-215ENST00000534307 CLOCKO15516 846 aa12.36□□□□□ -0.43
SF3B2-215ENST00000534307 TPST1O60507 370 aa12.36□□□□□ -0.43
SF3B2-215ENST00000534307 NCF2P19878 526 aaPredicted RBP12.36□□□□□ -0.43
SF3B2-215ENST00000534307 RUNDC3AQ59EK9 446 aa12.36□□□□□ -0.43
SF3B2-215ENST00000534307 TSPO2Q5TGU0 170 aa12.36□□□□□ -0.43
SF3B2-215ENST00000534307 YTHDF3Q7Z739 585 aaKnown RBP12.36□□□□□ -0.43
SF3B2-215ENST00000534307 P3H2Q8IVL5 708 aa12.36□□□□□ -0.43
SF3B2-215ENST00000534307 KBTBD8Q8NFY9 601 aa12.36□□□□□ -0.43
SF3B2-215ENST00000534307 TMEM171Q8WVE6 324 aa12.36□□□□□ -0.43
SF3B2-215ENST00000534307 NEUROG1Q92886 237 aa12.36□□□□□ -0.43
SF3B2-215ENST00000534307 FBXW5Q969U6 566 aa12.36□□□□□ -0.43
SF3B2-215ENST00000534307 MUCL1Q96DR8 90 aa12.36□□□□□ -0.43
SF3B2-215ENST00000534307 ZNF385AQ96PM9 386 aaKnown RBP12.36□□□□□ -0.43
SF3B2-215ENST00000534307 SIKE1Q9BRV8 207 aa12.36□□□□□ -0.43
SF3B2-215ENST00000534307 C12orf10Q9HB07 376 aa12.36□□□□□ -0.43
SF3B2-215ENST00000534307 CACYBPQ9HB71 228 aaKnown RBP12.36□□□□□ -0.43
SF3B2-215ENST00000534307 NPHS2Q9NP85 383 aa12.36□□□□□ -0.43
SF3B2-215ENST00000534307 PARPBPQ9NWS1 579 aa12.36□□□□□ -0.43
SF3B2-215ENST00000534307 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.36□□□□□ -0.43
SF3B2-215ENST00000534307 LEF1Q9UJU2 399 aaPredicted RBP12.36□□□□□ -0.43
SF3B2-215ENST00000534307 DCTN4Q9UJW0 460 aa12.36□□□□□ -0.43
SF3B2-215ENST00000534307 CORO2BQ9UQ03 480 aa12.36□□□□□ -0.43
SF3B2-215ENST00000534307 PLCE1Q9P212 2302 aa12.36□□□□□ -0.43
SF3B2-215ENST00000534307 SOD3P08294 240 aa12.35□□□□□ -0.43
SF3B2-215ENST00000534307 PCBP3P57721 371 aaKnown RBP12.35□□□□□ -0.43
SF3B2-215ENST00000534307 SCARB2Q14108 478 aa12.35□□□□□ -0.43
SF3B2-215ENST00000534307 PGGHGQ32M88 737 aa12.35□□□□□ -0.43
SF3B2-215ENST00000534307 GLIPR1L2Q4G1C9 344 aa12.35□□□□□ -0.43
SF3B2-215ENST00000534307 PTOV1Q86YD1 416 aa12.35□□□□□ -0.43
SF3B2-215ENST00000534307 CIARTQ8N365 385 aaPredicted RBP12.35□□□□□ -0.43
SF3B2-215ENST00000534307 C1orf162Q8NEQ5 155 aaPredicted RBP12.35□□□□□ -0.43
SF3B2-215ENST00000534307 MFSD8Q8NHS3 518 aa12.35□□□□□ -0.43
SF3B2-215ENST00000534307 TSPEARQ8WU66 669 aa12.35□□□□□ -0.43
SF3B2-215ENST00000534307 KTI12Q96EK9 354 aaPredicted RBP12.35□□□□□ -0.43
SF3B2-215ENST00000534307 BOD1Q96IK1 185 aa12.35□□□□□ -0.43
SF3B2-215ENST00000534307 COX4I2Q96KJ9 171 aa12.35□□□□□ -0.43
SF3B2-215ENST00000534307 Q96MF0 132 aa12.35□□□□□ -0.43
SF3B2-215ENST00000534307 ANKRD27Q96NW4 1050 aa12.35□□□□□ -0.43
SF3B2-215ENST00000534307 CXorf56Q9H5V9 222 aa12.35□□□□□ -0.43
SF3B2-215ENST00000534307 ADPRHL2Q9NX46 363 aa12.35□□□□□ -0.43
SF3B2-215ENST00000534307 CHD3Q12873 2000 aaKnown RBP12.35□□□□□ -0.43
SF3B2-215ENST00000534307 IGKV1D-42A0A075B6H8 117 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms