RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 PBLDP30039 288 aaPredicted RBP3.75□□□□□ -1.81
SOX6-217ENST00000533870 CCR4P51679 360 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 SUCLG1P53597 346 aaKnown RBP3.75□□□□□ -1.81
SOX6-217ENST00000533870 MVDP53602 400 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 PFN3P60673 137 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 ERVK-25P63136 954 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 HLXQ14774 488 aaPredicted RBP3.75□□□□□ -1.81
SOX6-217ENST00000533870 EIF2S3LQ2VIR3 472 aaKnown RBP3.75□□□□□ -1.81
SOX6-217ENST00000533870 ARSIQ5FYB1 569 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 ZNF776Q68DI1 518 aaPredicted RBP3.75□□□□□ -1.81
SOX6-217ENST00000533870 HEPHL1Q6MZM0 1159 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 ZNF585AQ6P3V2 769 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 CORO6Q6QEF8 472 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 PARGQ86W56 976 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 CFAP52Q8N1V2 620 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 KREMEN2Q8NCW0 462 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 OR6C4Q8NGE1 309 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 SH3RF2Q8TEC5 729 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 HLA-CQ95604 372 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 SLC25A44Q96H78 314 aaPredicted RBP3.75□□□□□ -1.81
SOX6-217ENST00000533870 PTCHD1Q96NR3 888 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 AMDHD1Q96NU7 426 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 SLC6A7Q99884 636 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 ZNF700Q9H0M5 742 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 ABCG8Q9H221 673 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 RIMS4Q9H426 269 aaPredicted RBP3.75□□□□□ -1.81
SOX6-217ENST00000533870 SPACA1Q9HBV2 294 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 POT1Q9NUX5 634 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 DKKL1Q9UK85 242 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 NDRG2Q9UN36 371 aaKnown RBP3.75□□□□□ -1.81
SOX6-217ENST00000533870 SLC7A11Q9UPY5 501 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 MRPS23Q9Y3D9 190 aaKnown RBP3.75□□□□□ -1.81
SOX6-217ENST00000533870 A0A0D9SEW6 157 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 TAPBPO15533 448 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 TOXO94900 526 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 PCDH8O95206 1070 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 TBX18O95935 607 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 HLA-DQA2P01906 255 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 PTH2RP49190 550 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 MTCP1P56278 107 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 LTBQ06643 244 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 LMAN2Q12907 356 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 GXYLT1Q4G148 440 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 FNDC3BQ53EP0 1204 aaKnown RBP3.75□□□□□ -1.81
SOX6-217ENST00000533870 ALG10BQ5I7T1 473 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 SDHAF4Q5VUM1 108 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 WBP2NLQ6ICG8 309 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 LIPIQ6XZB0 460 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 BTLAQ7Z6A9 289 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 ZNF619Q8N2I2 560 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 ZNF283Q8N7M2 679 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 FRMD1Q8N878 549 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 ACBD4Q8NC06 268 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 HASPINQ8TF76 798 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 SCAMP4Q969E2 229 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 SLC25A36Q96CQ1 311 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 LRRC46Q96FV0 321 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 SRMSQ9H3Y6 488 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 ANKRD20A5PA0PJZ0 165 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 CXorf65A6NEN9 183 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 PQBP1O60828 265 aaKnown RBP3.75□□□□□ -1.81
SOX6-217ENST00000533870 IQCF3P0C7M6 154 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 OR8U9P0C7N5 309 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 SEC11BP0C7V7 166 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 ABOP16442 354 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 FUT1P19526 365 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 AFF3P51826 1226 aaKnown RBP3.75□□□□□ -1.81
SOX6-217ENST00000533870 NKX6-1P78426 367 aaPredicted RBP3.75□□□□□ -1.81
SOX6-217ENST00000533870 EGR3Q06889 387 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 SSX2Q16385 188 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 GUCA2BQ16661 112 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 ALKAL2Q6UX46 152 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 RBMS3Q6XE24 437 aaKnown RBP3.75□□□□□ -1.81
SOX6-217ENST00000533870 Q6ZPB1 254 aaPredicted RBP3.75□□□□□ -1.81
SOX6-217ENST00000533870 TMED4Q7Z7H5 227 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 C11orf96Q7Z7L8 435 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 FAM217AQ8IXS0 508 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 OR2L13Q8N349 312 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 SLC22A24Q8N4F4 322 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 ZBTB44Q8NCP5 570 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 OR8D4Q8NGM9 314 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 ZNF563Q8TA94 476 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 SLC22A8Q8TCC7 542 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 MS4A4AQ96JQ5 239 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 DCBLD2Q96PD2 775 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 RTP3Q9BQQ7 232 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 BOCQ9BWV1 1114 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 RAB18Q9NP72 206 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 EVA1BQ9NVM1 165 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 RHCGQ9UBD6 479 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 FOXJ3Q9UPW0 622 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 YBX2Q9Y2T7 364 aaKnown RBP3.75□□□□□ -1.81
SOX6-217ENST00000533870 MMACHCQ9Y4U1 282 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 TBC1D3IA0A087WXS9 549 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 KIR2DS5A0A0G2JLQ3 304 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 A0A0G2JNG1 304 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 KIR2DS3K7RE56 304 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 M0R036 132 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 RAD51DO75771 328 aa3.75□□□□□ -1.81
SOX6-217ENST00000533870 VAMP5O95183 116 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms