RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 SNU13P55769 128 aaKnown RBP6.53□□□□□ -1.36
CTNND1-236ENST00000533667 NTHL1P78549 312 aa6.53□□□□□ -1.36
CTNND1-236ENST00000533667 MC2RQ01718 297 aa6.53□□□□□ -1.36
CTNND1-236ENST00000533667 NR0B2Q15466 257 aa6.53□□□□□ -1.36
CTNND1-236ENST00000533667 MSMO1Q15800 293 aa6.53□□□□□ -1.36
CTNND1-236ENST00000533667 FAM26DQ5JW98 314 aa6.53□□□□□ -1.36
CTNND1-236ENST00000533667 MANEAQ5SRI9 462 aa6.53□□□□□ -1.36
CTNND1-236ENST00000533667 MRPL2Q5T653 305 aaKnown RBP6.53□□□□□ -1.36
CTNND1-236ENST00000533667 VASH1Q7L8A9 365 aaPredicted RBP6.53□□□□□ -1.36
CTNND1-236ENST00000533667 S100A7AQ86SG5 101 aa6.53□□□□□ -1.36
CTNND1-236ENST00000533667 BPIFB2Q8N4F0 458 aa6.53□□□□□ -1.36
CTNND1-236ENST00000533667 SLC38A5Q8WUX1 472 aa6.53□□□□□ -1.36
CTNND1-236ENST00000533667 RSC1A1Q92681 617 aa6.53□□□□□ -1.36
CTNND1-236ENST00000533667 UPRTQ96BW1 309 aa6.53□□□□□ -1.36
CTNND1-236ENST00000533667 ELOVL3Q9HB03 270 aa6.53□□□□□ -1.36
CTNND1-236ENST00000533667 IGLV3-10A0A075B6K4 115 aa6.53□□□□□ -1.36
CTNND1-236ENST00000533667 TRBV4-1A0A0J9YWV2 114 aa6.53□□□□□ -1.36
CTNND1-236ENST00000533667 SLC9B1P1A6NJY1 282 aa6.53□□□□□ -1.36
CTNND1-236ENST00000533667 CTDSP2O14595 271 aa6.53□□□□□ -1.36
CTNND1-236ENST00000533667 LDB3O75112 727 aa6.53□□□□□ -1.36
CTNND1-236ENST00000533667 MT-ND4P03905 459 aa6.53□□□□□ -1.36
CTNND1-236ENST00000533667 TRAPPC2P0DI81 140 aa6.53□□□□□ -1.36
CTNND1-236ENST00000533667 TRAPPC2BP0DI82 140 aa6.53□□□□□ -1.36
CTNND1-236ENST00000533667 ARSAP15289 507 aa6.53□□□□□ -1.36
CTNND1-236ENST00000533667 FPR3P25089 353 aa6.53□□□□□ -1.36
CTNND1-236ENST00000533667 SFTPDP35247 375 aa6.53□□□□□ -1.36
CTNND1-236ENST00000533667 CASP3P42574 277 aa6.53□□□□□ -1.36
CTNND1-236ENST00000533667 P2RX3P56373 397 aa6.53□□□□□ -1.36
CTNND1-236ENST00000533667 RRAS2P62070 204 aaPredicted RBP6.53□□□□□ -1.36
CTNND1-236ENST00000533667 SNRPGP62308 76 aaKnown RBP6.53□□□□□ -1.36
CTNND1-236ENST00000533667 SIRPAP78324 504 aa6.53□□□□□ -1.36
CTNND1-236ENST00000533667 SRPXP78539 464 aa6.53□□□□□ -1.36
CTNND1-236ENST00000533667 CTBSQ01459 385 aa6.53□□□□□ -1.36
CTNND1-236ENST00000533667 TEKQ02763 1124 aa6.53□□□□□ -1.36
CTNND1-236ENST00000533667 SEMA3BQ13214 749 aa6.53□□□□□ -1.36
CTNND1-236ENST00000533667 TMEM201Q5SNT2 666 aa6.53□□□□□ -1.36
CTNND1-236ENST00000533667 Q6ZSR9 355 aa6.53□□□□□ -1.36
CTNND1-236ENST00000533667 ZNF679Q8IYX0 411 aa6.53□□□□□ -1.36
CTNND1-236ENST00000533667 LILRA2Q8N149 483 aa6.53□□□□□ -1.36
CTNND1-236ENST00000533667 MRPL43Q8N983 215 aaKnown RBP6.53□□□□□ -1.36
CTNND1-236ENST00000533667 OR4F15Q8NGB8 312 aa6.53□□□□□ -1.36
CTNND1-236ENST00000533667 OR51Q1Q8NH59 317 aa6.53□□□□□ -1.36
CTNND1-236ENST00000533667 ABHD5Q8WTS1 349 aa6.53□□□□□ -1.36
CTNND1-236ENST00000533667 ZNF419Q96HQ0 510 aaPredicted RBP6.53□□□□□ -1.36
CTNND1-236ENST00000533667 BTF3L4Q96K17 158 aa6.53□□□□□ -1.36
CTNND1-236ENST00000533667 ZNF681Q96N22 645 aa6.53□□□□□ -1.36
CTNND1-236ENST00000533667 MS4A8Q9BY19 250 aa6.53□□□□□ -1.36
CTNND1-236ENST00000533667 METTL9Q9H1A3 318 aa6.53□□□□□ -1.36
CTNND1-236ENST00000533667 SLC6A17Q9H1V8 727 aa6.53□□□□□ -1.36
CTNND1-236ENST00000533667 ZNF286AQ9HBT8 521 aa6.53□□□□□ -1.36
CTNND1-236ENST00000533667 DUSP22Q9NRW4 184 aa6.53□□□□□ -1.36
CTNND1-236ENST00000533667 VSX1Q9NZR4 365 aaPredicted RBP6.53□□□□□ -1.36
CTNND1-236ENST00000533667 SLAMF8Q9P0V8 285 aa6.53□□□□□ -1.36
CTNND1-236ENST00000533667 RCE1Q9Y256 329 aa6.53□□□□□ -1.36
CTNND1-236ENST00000533667 TRDV1A0A1B0GX56 115 aa6.52□□□□□ -1.36
CTNND1-236ENST00000533667 GFRA2O00451 464 aa6.52□□□□□ -1.36
CTNND1-236ENST00000533667 FADS1O60427 444 aa6.52□□□□□ -1.36
CTNND1-236ENST00000533667 IGHEP01854 428 aa6.52□□□□□ -1.36
CTNND1-236ENST00000533667 Q499Y3 187 aa6.52□□□□□ -1.36
CTNND1-236ENST00000533667 SLC35D3Q5M8T2 416 aa6.52□□□□□ -1.36
CTNND1-236ENST00000533667 SLX4IPQ5VYV7 408 aa6.52□□□□□ -1.36
CTNND1-236ENST00000533667 APOOLQ6UXV4 268 aa6.52□□□□□ -1.36
CTNND1-236ENST00000533667 GAREM2Q75VX8 874 aa6.52□□□□□ -1.36
CTNND1-236ENST00000533667 TRAPPC6BQ86SZ2 158 aa6.52□□□□□ -1.36
CTNND1-236ENST00000533667 ZNF546Q86UE3 836 aa6.52□□□□□ -1.36
CTNND1-236ENST00000533667 SUMF2Q8NBJ7 301 aa6.52□□□□□ -1.36
CTNND1-236ENST00000533667 SLC41A2Q96JW4 573 aa6.52□□□□□ -1.36
CTNND1-236ENST00000533667 ZNF582Q96NG8 517 aaPredicted RBP6.52□□□□□ -1.36
CTNND1-236ENST00000533667 ADOQ96SZ5 270 aa6.52□□□□□ -1.36
CTNND1-236ENST00000533667 RPS10P5Q9NQ39 176 aa6.52□□□□□ -1.36
CTNND1-236ENST00000533667 PGAP2Q9UHJ9 254 aa6.52□□□□□ -1.36
CTNND1-236ENST00000533667 CAMK2AQ9UQM7 478 aa6.52□□□□□ -1.36
CTNND1-236ENST00000533667 NME7Q9Y5B8 376 aa6.52□□□□□ -1.36
CTNND1-236ENST00000533667 NPIPA5A0A0B4J1W7 369 aa6.52□□□□□ -1.37
CTNND1-236ENST00000533667 J3QR89 54 aa6.52□□□□□ -1.37
CTNND1-236ENST00000533667 HLA-AP01891 365 aaKnown RBP6.52□□□□□ -1.37
CTNND1-236ENST00000533667 TNFSF4P23510 183 aa6.52□□□□□ -1.37
CTNND1-236ENST00000533667 PAX6P26367 422 aa6.52□□□□□ -1.37
CTNND1-236ENST00000533667 ECI1P42126 302 aa6.52□□□□□ -1.37
CTNND1-236ENST00000533667 CHRNEQ04844 493 aa6.52□□□□□ -1.37
CTNND1-236ENST00000533667 EXOSC7Q15024 291 aaKnown RBP6.52□□□□□ -1.37
CTNND1-236ENST00000533667 C14orf28Q4W4Y0 310 aa6.52□□□□□ -1.37
CTNND1-236ENST00000533667 CD300LGQ6UXG3 332 aa6.52□□□□□ -1.37
CTNND1-236ENST00000533667 OR2T11Q8NH01 316 aa6.52□□□□□ -1.37
CTNND1-236ENST00000533667 SGCZQ96LD1 299 aa6.52□□□□□ -1.37
CTNND1-236ENST00000533667 HDAC8Q9BY41 377 aa6.52□□□□□ -1.37
CTNND1-236ENST00000533667 TGIF2Q9GZN2 237 aa6.52□□□□□ -1.37
CTNND1-236ENST00000533667 ENKD1Q9H0I2 346 aa6.52□□□□□ -1.37
CTNND1-236ENST00000533667 DOT1LQ8TEK3 1739 aa6.52□□□□□ -1.37
CTNND1-236ENST00000533667 TMEM82A0PJX8 343 aa6.52□□□□□ -1.37
CTNND1-236ENST00000533667 TSPAN11A1L157 253 aa6.52□□□□□ -1.37
CTNND1-236ENST00000533667 OR6C6A6NF89 314 aa6.52□□□□□ -1.37
CTNND1-236ENST00000533667 SHOXO15266 292 aa6.52□□□□□ -1.37
CTNND1-236ENST00000533667 LILRB5O75023 590 aa6.52□□□□□ -1.37
CTNND1-236ENST00000533667 SLCO2B1O94956 709 aa6.52□□□□□ -1.37
CTNND1-236ENST00000533667 PIPP12273 146 aaPredicted RBP6.52□□□□□ -1.37
CTNND1-236ENST00000533667 BMP1P13497 986 aa6.52□□□□□ -1.37
CTNND1-236ENST00000533667 S100A7P31151 101 aa6.52□□□□□ -1.37
CTNND1-236ENST00000533667 AFF3P51826 1226 aaKnown RBP6.52□□□□□ -1.37
CTNND1-236ENST00000533667 YIF1BQ5BJH7 314 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms