RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 SLC1A3P43003 542 aa11.36□□□□□ -0.59
BDNF-218ENST00000533246 VASPP50552 380 aaPredicted RBP11.36□□□□□ -0.59
BDNF-218ENST00000533246 SNU13P55769 128 aaKnown RBP11.36□□□□□ -0.59
BDNF-218ENST00000533246 SYT6Q5T7P8 510 aaPredicted RBP11.36□□□□□ -0.59
BDNF-218ENST00000533246 TECPR1Q7Z6L1 1165 aa11.36□□□□□ -0.59
BDNF-218ENST00000533246 PLXDC1Q8IUK5 500 aa11.36□□□□□ -0.59
BDNF-218ENST00000533246 MED18Q9BUE0 208 aa11.36□□□□□ -0.59
BDNF-218ENST00000533246 CCDC32Q9BV29 185 aa11.36□□□□□ -0.59
BDNF-218ENST00000533246 KATNB1Q9BVA0 655 aa11.36□□□□□ -0.59
BDNF-218ENST00000533246 ARL6Q9H0F7 186 aa11.36□□□□□ -0.59
BDNF-218ENST00000533246 LRIT1Q9P2V4 623 aa11.36□□□□□ -0.59
BDNF-218ENST00000533246 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.35□□□□□ -0.59
BDNF-218ENST00000533246 TEX13DA0A0J9YY54 714 aaPredicted RBP11.35□□□□□ -0.59
BDNF-218ENST00000533246 PEX12O00623 359 aa11.35□□□□□ -0.59
BDNF-218ENST00000533246 PIP5K1CO60331 668 aa11.35□□□□□ -0.59
BDNF-218ENST00000533246 SLC16A7O60669 478 aa11.35□□□□□ -0.59
BDNF-218ENST00000533246 SNRPBP14678 240 aaKnown RBP11.35□□□□□ -0.59
BDNF-218ENST00000533246 RPS19P39019 145 aaKnown RBP11.35□□□□□ -0.59
BDNF-218ENST00000533246 CTBP2P56545 445 aa11.35□□□□□ -0.59
BDNF-218ENST00000533246 CLRN1P58418 232 aa11.35□□□□□ -0.59
BDNF-218ENST00000533246 ZP2Q05996 745 aa11.35□□□□□ -0.59
BDNF-218ENST00000533246 DUSP5Q16690 384 aa11.35□□□□□ -0.59
BDNF-218ENST00000533246 SFTPA1Q8IWL2 248 aa11.35□□□□□ -0.59
BDNF-218ENST00000533246 RIMKLAQ8IXN7 391 aa11.35□□□□□ -0.59
BDNF-218ENST00000533246 KDM8Q8N371 416 aa11.35□□□□□ -0.59
BDNF-218ENST00000533246 INO80EQ8NBZ0 244 aaPredicted RBP11.35□□□□□ -0.59
BDNF-218ENST00000533246 OR1M1Q8NGA1 313 aa11.35□□□□□ -0.59
BDNF-218ENST00000533246 OR52N1Q8NH53 320 aa11.35□□□□□ -0.59
BDNF-218ENST00000533246 SLC37A2Q8TED4 501 aa11.35□□□□□ -0.59
BDNF-218ENST00000533246 CNOT9Q92600 299 aaKnown RBP11.35□□□□□ -0.59
BDNF-218ENST00000533246 TBC1D20Q96BZ9 403 aa11.35□□□□□ -0.59
BDNF-218ENST00000533246 HIST1H2AAQ96QV6 131 aa11.35□□□□□ -0.59
BDNF-218ENST00000533246 ELF4Q99607 663 aaPredicted RBP11.35□□□□□ -0.59
BDNF-218ENST00000533246 NUDT22Q9BRQ3 303 aa11.35□□□□□ -0.59
BDNF-218ENST00000533246 RPP25Q9BUL9 199 aaKnown RBP11.35□□□□□ -0.59
BDNF-218ENST00000533246 FN3KQ9H479 309 aa11.35□□□□□ -0.59
BDNF-218ENST00000533246 C1GALT1Q9NS00 363 aa11.35□□□□□ -0.59
BDNF-218ENST00000533246 VSX1Q9NZR4 365 aaPredicted RBP11.35□□□□□ -0.59
BDNF-218ENST00000533246 TMEM14AQ9Y6G1 99 aa11.35□□□□□ -0.59
BDNF-218ENST00000533246 ARFGEF1Q9Y6D6 1849 aa11.35□□□□□ -0.59
BDNF-218ENST00000533246 CBY3A6NI87 242 aa11.35□□□□□ -0.59
BDNF-218ENST00000533246 EGFP01133 1207 aa11.35□□□□□ -0.59
BDNF-218ENST00000533246 UCHL1P09936 223 aa11.35□□□□□ -0.59
BDNF-218ENST00000533246 GIFP27352 417 aa11.35□□□□□ -0.59
BDNF-218ENST00000533246 AQP2P41181 271 aa11.35□□□□□ -0.59
BDNF-218ENST00000533246 CDNFQ49AH0 187 aa11.35□□□□□ -0.59
BDNF-218ENST00000533246 OR5AK2Q8NH90 309 aa11.35□□□□□ -0.59
BDNF-218ENST00000533246 ALG14Q96F25 216 aa11.35□□□□□ -0.59
BDNF-218ENST00000533246 ZNF582Q96NG8 517 aaPredicted RBP11.35□□□□□ -0.59
BDNF-218ENST00000533246 NMNAT3Q96T66 252 aa11.35□□□□□ -0.59
BDNF-218ENST00000533246 THAP7Q9BT49 309 aaPredicted RBP11.35□□□□□ -0.59
BDNF-218ENST00000533246 MS4A7Q9GZW8 240 aaPredicted RBP11.35□□□□□ -0.59
BDNF-218ENST00000533246 ACOXLQ9NUZ1 547 aa11.35□□□□□ -0.59
BDNF-218ENST00000533246 TXNL4BQ9NX01 149 aaKnown RBP11.35□□□□□ -0.59
BDNF-218ENST00000533246 PCOLCE2Q9UKZ9 415 aa11.35□□□□□ -0.59
BDNF-218ENST00000533246 CACNG2Q9Y698 323 aa11.35□□□□□ -0.59
BDNF-218ENST00000533246 KDM4EB2RXH2 506 aaPredicted RBP11.35□□□□□ -0.59
BDNF-218ENST00000533246 GABRPO00591 440 aa11.35□□□□□ -0.59
BDNF-218ENST00000533246 SLC2A10O95528 541 aa11.35□□□□□ -0.59
BDNF-218ENST00000533246 CXCL10P02778 98 aa11.35□□□□□ -0.59
BDNF-218ENST00000533246 S100A8P05109 93 aa11.35□□□□□ -0.59
BDNF-218ENST00000533246 ACP2P11117 423 aa11.35□□□□□ -0.59
BDNF-218ENST00000533246 IFITM3Q01628 133 aa11.35□□□□□ -0.59
BDNF-218ENST00000533246 MLLT11Q13015 90 aaPredicted RBP11.35□□□□□ -0.59
BDNF-218ENST00000533246 NKAIN2Q5VXU1 208 aa11.35□□□□□ -0.59
BDNF-218ENST00000533246 SLC48A1Q6P1K1 146 aa11.35□□□□□ -0.59
BDNF-218ENST00000533246 IL17RDQ8NFM7 739 aa11.35□□□□□ -0.59
BDNF-218ENST00000533246 CCDC107Q8WV48 283 aa11.35□□□□□ -0.59
BDNF-218ENST00000533246 RSC1A1Q92681 617 aa11.35□□□□□ -0.59
BDNF-218ENST00000533246 ZNF471Q9BX82 626 aaPredicted RBP11.35□□□□□ -0.59
BDNF-218ENST00000533246 ZNF701Q9NV72 531 aaPredicted RBP11.35□□□□□ -0.59
BDNF-218ENST00000533246 NDRG4Q9ULP0 352 aaKnown RBP11.35□□□□□ -0.59
BDNF-218ENST00000533246 SHANK3Q9BYB0 1731 aa11.34□□□□□ -0.59
BDNF-218ENST00000533246 TMEM72A0PK05 275 aa11.34□□□□□ -0.59
BDNF-218ENST00000533246 HMGN4O00479 90 aa11.34□□□□□ -0.59
BDNF-218ENST00000533246 TXNDC12O95881 172 aa11.34□□□□□ -0.59
BDNF-218ENST00000533246 MAOAP21397 527 aa11.34□□□□□ -0.59
BDNF-218ENST00000533246 RIDAP52758 137 aaKnown RBP11.34□□□□□ -0.59
BDNF-218ENST00000533246 ART1P52961 327 aa11.34□□□□□ -0.59
BDNF-218ENST00000533246 ACTA2P62736 377 aa11.34□□□□□ -0.59
BDNF-218ENST00000533246 ACTG2P63267 376 aa11.34□□□□□ -0.59
BDNF-218ENST00000533246 REEP5Q00765 189 aa11.34□□□□□ -0.59
BDNF-218ENST00000533246 AQP6Q13520 282 aa11.34□□□□□ -0.59
BDNF-218ENST00000533246 CLINT1Q14677 625 aa11.34□□□□□ -0.59
BDNF-218ENST00000533246 OR7E24Q6IFN5 339 aa11.34□□□□□ -0.59
BDNF-218ENST00000533246 MAMDC2Q7Z304 686 aaPredicted RBP11.34□□□□□ -0.59
BDNF-218ENST00000533246 SLC35F2Q8IXU6 374 aa11.34□□□□□ -0.59
BDNF-218ENST00000533246 PHOSPHO2Q8TCD6 241 aa11.34□□□□□ -0.59
BDNF-218ENST00000533246 GHSRQ92847 366 aa11.34□□□□□ -0.59
BDNF-218ENST00000533246 MS4A6EQ96DS6 147 aa11.34□□□□□ -0.59
BDNF-218ENST00000533246 SIRT5Q9NXA8 310 aa11.34□□□□□ -0.59
BDNF-218ENST00000533246 NCDNQ9UBB6 729 aa11.34□□□□□ -0.59
BDNF-218ENST00000533246 SCP2D1Q9UJQ7 156 aa11.34□□□□□ -0.59
BDNF-218ENST00000533246 SCN3AQ9NY46 2000 aa11.34□□□□□ -0.59
BDNF-218ENST00000533246 KIR2DS5A0A0G2JLQ3 304 aa11.34□□□□□ -0.59
BDNF-218ENST00000533246 A0A0G2JNG1 304 aa11.34□□□□□ -0.59
BDNF-218ENST00000533246 A0A1B0GWA3 101 aa11.34□□□□□ -0.59
BDNF-218ENST00000533246 ANKRD61A6NGH8 418 aa11.34□□□□□ -0.59
BDNF-218ENST00000533246 ARGFXA6NJG6 315 aa11.34□□□□□ -0.59
BDNF-218ENST00000533246 VSTM2BA6NLU5 285 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms