RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 OR9K2Q8NGE7 335 aa26.72■■□□□ 1.87
SSSCA1-207ENST00000533115 TRIM2Q9C040 744 aa26.72■■□□□ 1.87
SSSCA1-207ENST00000533115 ESRP2Q9H6T0 727 aaKnown RBP26.72■■□□□ 1.87
SSSCA1-207ENST00000533115 KAT8Q9H7Z6 458 aaKnown RBP26.72■■□□□ 1.87
SSSCA1-207ENST00000533115 A0A1B0GWA3 101 aa26.71■■□□□ 1.87
SSSCA1-207ENST00000533115 FBP2O00757 339 aa26.71■■□□□ 1.87
SSSCA1-207ENST00000533115 AHSA1O95433 338 aa26.71■■□□□ 1.87
SSSCA1-207ENST00000533115 P2RY4P51582 365 aa26.71■■□□□ 1.87
SSSCA1-207ENST00000533115 PCBP3P57721 371 aaKnown RBP26.71■■□□□ 1.87
SSSCA1-207ENST00000533115 GUCY1A3Q02108 690 aa26.71■■□□□ 1.87
SSSCA1-207ENST00000533115 EGR4Q05215 589 aa26.71■■□□□ 1.87
SSSCA1-207ENST00000533115 SF3A3Q12874 501 aaKnown RBP eCLIP26.71■■□□□ 1.87
SSSCA1-207ENST00000533115 FAPQ12884 760 aa26.71■■□□□ 1.87
SSSCA1-207ENST00000533115 PPA1Q15181 289 aa26.71■■□□□ 1.87
SSSCA1-207ENST00000533115 TMEM225Q6GV28 225 aa26.71■■□□□ 1.87
SSSCA1-207ENST00000533115 OR52E4Q8NGH9 312 aa26.71■■□□□ 1.87
SSSCA1-207ENST00000533115 TMEM45BQ96B21 275 aa26.71■■□□□ 1.87
SSSCA1-207ENST00000533115 MUCL1Q96DR8 90 aa26.71■■□□□ 1.87
SSSCA1-207ENST00000533115 PIF1Q9H611 641 aa26.71■■□□□ 1.87
SSSCA1-207ENST00000533115 SLC13A4Q9UKG4 626 aa26.71■■□□□ 1.87
SSSCA1-207ENST00000533115 CCT8L1PA6NM43 557 aa26.7■■□□□ 1.86
SSSCA1-207ENST00000533115 SMPD2O60906 423 aa26.7■■□□□ 1.86
SSSCA1-207ENST00000533115 RAD51DO75771 328 aa26.7■■□□□ 1.86
SSSCA1-207ENST00000533115 MFN2O95140 757 aa26.7■■□□□ 1.86
SSSCA1-207ENST00000533115 HOXC12P31275 282 aa26.7■■□□□ 1.86
SSSCA1-207ENST00000533115 DMTNQ08495 405 aa26.7■■□□□ 1.86
SSSCA1-207ENST00000533115 SSX8Q7RTT4 187 aa26.7■■□□□ 1.86
SSSCA1-207ENST00000533115 NET1Q7Z628 596 aaPredicted RBP26.7■■□□□ 1.86
SSSCA1-207ENST00000533115 GPAT4Q86UL3 456 aa26.7■■□□□ 1.86
SSSCA1-207ENST00000533115 ZIC4Q8N9L1 334 aa26.7■■□□□ 1.86
SSSCA1-207ENST00000533115 MFSD8Q8NHS3 518 aa26.7■■□□□ 1.86
SSSCA1-207ENST00000533115 DNAJA4Q8WW22 397 aaPredicted RBP26.7■■□□□ 1.86
SSSCA1-207ENST00000533115 PTDSS2Q9BVG9 487 aa26.7■■□□□ 1.86
SSSCA1-207ENST00000533115 PRR14Q9BWN1 585 aa26.7■■□□□ 1.86
SSSCA1-207ENST00000533115 EVA1AQ9H8M9 152 aa26.7■■□□□ 1.86
SSSCA1-207ENST00000533115 TAS2R16Q9NYV7 291 aa26.7■■□□□ 1.86
SSSCA1-207ENST00000533115 TESQ9UGI8 421 aaKnown RBP26.7■■□□□ 1.86
SSSCA1-207ENST00000533115 RNF115Q9Y4L5 304 aa26.7■■□□□ 1.86
SSSCA1-207ENST00000533115 DSCAMO60469 2012 aa26.7■■□□□ 1.86
SSSCA1-207ENST00000533115 CIB4A0PJX0 185 aa26.69■■□□□ 1.86
SSSCA1-207ENST00000533115 OR5H1A6NKK0 313 aa26.69■■□□□ 1.86
SSSCA1-207ENST00000533115 FTCDNL1E5RQL4 147 aa26.69■■□□□ 1.86
SSSCA1-207ENST00000533115 HS3ST1O14792 307 aa26.69■■□□□ 1.86
SSSCA1-207ENST00000533115 VAMP5O95183 116 aa26.69■■□□□ 1.86
SSSCA1-207ENST00000533115 CD3EP07766 207 aa26.69■■□□□ 1.86
SSSCA1-207ENST00000533115 RGS8P57771 180 aaPredicted RBP26.69■■□□□ 1.86
SSSCA1-207ENST00000533115 NCALDP61601 193 aa26.69■■□□□ 1.86
SSSCA1-207ENST00000533115 NKX6-1P78426 367 aaPredicted RBP26.69■■□□□ 1.86
SSSCA1-207ENST00000533115 FOXD4Q12950 439 aaPredicted RBP26.69■■□□□ 1.86
SSSCA1-207ENST00000533115 LRRC75A-AS1Q8N1F1 130 aa26.69■■□□□ 1.86
SSSCA1-207ENST00000533115 ZNF385AQ96PM9 386 aaKnown RBP26.69■■□□□ 1.86
SSSCA1-207ENST00000533115 CCDC134Q9H6E4 229 aa26.69■■□□□ 1.86
SSSCA1-207ENST00000533115 MED4Q9NPJ6 270 aa26.69■■□□□ 1.86
SSSCA1-207ENST00000533115 UPB1Q9UBR1 384 aa26.69■■□□□ 1.86
SSSCA1-207ENST00000533115 PNMTP11086 282 aa26.68■■□□□ 1.86
SSSCA1-207ENST00000533115 RPS5P46782 204 aaKnown RBP26.68■■□□□ 1.86
SSSCA1-207ENST00000533115 CYLC2Q14093 348 aaPredicted RBP26.68■■□□□ 1.86
SSSCA1-207ENST00000533115 TRMT5Q32P41 509 aaKnown RBP26.68■■□□□ 1.86
SSSCA1-207ENST00000533115 ALG10BQ5I7T1 473 aa26.68■■□□□ 1.86
SSSCA1-207ENST00000533115 TSPO2Q5TGU0 170 aa26.68■■□□□ 1.86
SSSCA1-207ENST00000533115 FAM91A1Q658Y4 838 aa26.68■■□□□ 1.86
SSSCA1-207ENST00000533115 ULK3Q6PHR2 472 aa26.68■■□□□ 1.86
SSSCA1-207ENST00000533115 SMYD1Q8NB12 490 aa26.68■■□□□ 1.86
SSSCA1-207ENST00000533115 WFDC11Q8NEX6 87 aa26.68■■□□□ 1.86
SSSCA1-207ENST00000533115 AKAP1Q92667 903 aaKnown RBP eCLIP26.68■■□□□ 1.864e-7■■■□□ 17
SSSCA1-207ENST00000533115 SLC25A36Q96CQ1 311 aa26.68■■□□□ 1.86
SSSCA1-207ENST00000533115 KTI12Q96EK9 354 aaPredicted RBP26.68■■□□□ 1.86
SSSCA1-207ENST00000533115 SAR1AQ9NR31 198 aa26.68■■□□□ 1.86
SSSCA1-207ENST00000533115 SLC7A10Q9NS82 523 aa26.68■■□□□ 1.86
SSSCA1-207ENST00000533115 PDLIM1O00151 329 aa26.67■■□□□ 1.86
SSSCA1-207ENST00000533115 CLOCKO15516 846 aa26.67■■□□□ 1.86
SSSCA1-207ENST00000533115 ITGA5P08648 1049 aa26.67■■□□□ 1.86
SSSCA1-207ENST00000533115 FOXG1P55316 489 aaPredicted RBP26.67■■□□□ 1.86
SSSCA1-207ENST00000533115 BSPH1Q075Z2 132 aa26.67■■□□□ 1.86
SSSCA1-207ENST00000533115 KLF10Q13118 480 aa26.67■■□□□ 1.86
SSSCA1-207ENST00000533115 NANOGP8Q6NSW7 305 aa26.67■■□□□ 1.86
SSSCA1-207ENST00000533115 ADAM5Q6NVV9 412 aa26.67■■□□□ 1.86
SSSCA1-207ENST00000533115 C5orf46Q6UWT4 87 aa26.67■■□□□ 1.86
SSSCA1-207ENST00000533115 AAED1Q7RTV5 226 aa26.67■■□□□ 1.86
SSSCA1-207ENST00000533115 KRTAP1-3Q8IUG1 177 aa26.67■■□□□ 1.86
SSSCA1-207ENST00000533115 SLC30A8Q8IWU4 369 aa26.67■■□□□ 1.86
SSSCA1-207ENST00000533115 ZNF611Q8N823 705 aa26.67■■□□□ 1.86
SSSCA1-207ENST00000533115 OR10A6Q8NH74 314 aa26.67■■□□□ 1.86
SSSCA1-207ENST00000533115 SLC47A1Q96FL8 570 aa26.67■■□□□ 1.86
SSSCA1-207ENST00000533115 WFDC6Q9BQY6 131 aa26.67■■□□□ 1.86
SSSCA1-207ENST00000533115 NANOGQ9H9S0 305 aa26.67■■□□□ 1.86
SSSCA1-207ENST00000533115 TMEM27Q9HBJ8 222 aa26.67■■□□□ 1.86
SSSCA1-207ENST00000533115 RASD1Q9Y272 281 aa26.67■■□□□ 1.86
SSSCA1-207ENST00000533115 MTORP42345 2549 aa26.67■■□□□ 1.86
SSSCA1-207ENST00000533115 DPRXA6NFQ7 191 aa26.66■■□□□ 1.86
SSSCA1-207ENST00000533115 M0QX08 132 aa26.66■■□□□ 1.86
SSSCA1-207ENST00000533115 TPST2O60704 377 aa26.66■■□□□ 1.86
SSSCA1-207ENST00000533115 OR1Q1Q15612 314 aa26.66■■□□□ 1.86
SSSCA1-207ENST00000533115 GABRA6Q16445 453 aa26.66■■□□□ 1.86
SSSCA1-207ENST00000533115 COQ5Q5HYK3 327 aa26.66■■□□□ 1.86
SSSCA1-207ENST00000533115 SHEQ5VZ18 495 aa26.66■■□□□ 1.86
SSSCA1-207ENST00000533115 OR7E24Q6IFN5 339 aa26.66■■□□□ 1.86
SSSCA1-207ENST00000533115 RANBP3LQ86VV4 465 aaPredicted RBP26.66■■□□□ 1.86
SSSCA1-207ENST00000533115 LILRB1Q8NHL6 650 aaPredicted RBP26.66■■□□□ 1.86
SSSCA1-207ENST00000533115 SLC38A4Q969I6 547 aa26.66■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms