RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 NCS1P62166 190 aa13.72□□□□□ -0.21
PCDHA9-202ENST00000532602 ZNF684Q5T5D7 378 aa13.72□□□□□ -0.21
PCDHA9-202ENST00000532602 TM4SF18Q96CE8 201 aa13.72□□□□□ -0.21
PCDHA9-202ENST00000532602 MED17Q9NVC6 651 aa13.72□□□□□ -0.21
PCDHA9-202ENST00000532602 YBX2Q9Y2T7 364 aaKnown RBP13.72□□□□□ -0.21
PCDHA9-202ENST00000532602 TRAV36DV7A0A075B6V5 113 aa13.71□□□□□ -0.21
PCDHA9-202ENST00000532602 TOXO94900 526 aa13.71□□□□□ -0.21
PCDHA9-202ENST00000532602 T-ENOLP0DO92 83 aa13.71□□□□□ -0.21
PCDHA9-202ENST00000532602 GLULP15104 373 aa13.71□□□□□ -0.21
PCDHA9-202ENST00000532602 DPY19L4Q7Z388 723 aa13.71□□□□□ -0.21
PCDHA9-202ENST00000532602 MRGPRX1Q96LB2 322 aa13.71□□□□□ -0.21
PCDHA9-202ENST00000532602 KIR3DX1Q9H7L2 352 aa13.71□□□□□ -0.21
PCDHA9-202ENST00000532602 ELOVL3Q9HB03 270 aa13.71□□□□□ -0.21
PCDHA9-202ENST00000532602 FAIMQ9NVQ4 179 aa13.71□□□□□ -0.21
PCDHA9-202ENST00000532602 LOXHD1Q8IVV2 1947 aa13.71□□□□□ -0.21
PCDHA9-202ENST00000532602 PRAF2O60831 178 aa13.71□□□□□ -0.21
PCDHA9-202ENST00000532602 WNT11O96014 354 aa13.71□□□□□ -0.21
PCDHA9-202ENST00000532602 CTSLP07711 333 aa13.71□□□□□ -0.21
PCDHA9-202ENST00000532602 AKAIN1P0CW23 69 aa13.71□□□□□ -0.21
PCDHA9-202ENST00000532602 EPHA1P21709 976 aa13.71□□□□□ -0.21
PCDHA9-202ENST00000532602 GABRA2P47869 451 aa13.71□□□□□ -0.21
PCDHA9-202ENST00000532602 CARD18P57730 90 aa13.71□□□□□ -0.21
PCDHA9-202ENST00000532602 OR7E24Q6IFN5 339 aa13.71□□□□□ -0.21
PCDHA9-202ENST00000532602 LRRC56Q8IYG6 542 aaPredicted RBP13.71□□□□□ -0.21
PCDHA9-202ENST00000532602 ZNF454Q8N9F8 522 aa13.71□□□□□ -0.21
PCDHA9-202ENST00000532602 MED20Q9H944 212 aa13.71□□□□□ -0.21
PCDHA9-202ENST00000532602 BABAM2Q9NXR7 383 aa13.71□□□□□ -0.21
PCDHA9-202ENST00000532602 METTL15A6NJ78 407 aa13.71□□□□□ -0.21
PCDHA9-202ENST00000532602 SRFP11831 508 aa13.71□□□□□ -0.21
PCDHA9-202ENST00000532602 OPRD1P41143 372 aa13.71□□□□□ -0.21
PCDHA9-202ENST00000532602 HYAL1Q12794 435 aa13.71□□□□□ -0.21
PCDHA9-202ENST00000532602 SBSNQ6UWP8 590 aa13.71□□□□□ -0.21
PCDHA9-202ENST00000532602 SORCS2Q96PQ0 1159 aa13.71□□□□□ -0.21
PCDHA9-202ENST00000532602 NRSN2Q9GZP1 204 aa13.71□□□□□ -0.21
PCDHA9-202ENST00000532602 LHPPQ9H008 270 aa13.71□□□□□ -0.21
PCDHA9-202ENST00000532602 CDCP1Q9H5V8 836 aa13.71□□□□□ -0.21
PCDHA9-202ENST00000532602 NIPAL2Q9H841 368 aa13.71□□□□□ -0.21
PCDHA9-202ENST00000532602 INTS6Q9UL03 887 aaKnown RBP13.71□□□□□ -0.21
PCDHA9-202ENST00000532602 MARF1Q9Y4F3 1742 aaKnown RBP13.71□□□□□ -0.21
PCDHA9-202ENST00000532602 TIMM8AO60220 97 aaPredicted RBP13.71□□□□□ -0.22
PCDHA9-202ENST00000532602 CSNK1G2P78368 415 aa13.71□□□□□ -0.22
PCDHA9-202ENST00000532602 HAGHLQ6PII5 290 aaPredicted RBP13.71□□□□□ -0.22
PCDHA9-202ENST00000532602 CMIPQ8IY22 773 aa13.71□□□□□ -0.22
PCDHA9-202ENST00000532602 IL1F10Q8WWZ1 152 aa13.71□□□□□ -0.22
PCDHA9-202ENST00000532602 SLC29A1Q99808 456 aa13.71□□□□□ -0.22
PCDHA9-202ENST00000532602 AGPAT4Q9NRZ5 378 aa13.71□□□□□ -0.22
PCDHA9-202ENST00000532602 NLKQ9UBE8 527 aa13.71□□□□□ -0.22
PCDHA9-202ENST00000532602 ANKRD34BA5PLL1 514 aa13.71□□□□□ -0.22
PCDHA9-202ENST00000532602 SLCO2B1O94956 709 aa13.71□□□□□ -0.22
PCDHA9-202ENST00000532602 MSL3P1P0C860 447 aa13.71□□□□□ -0.22
PCDHA9-202ENST00000532602 IL7P13232 177 aa13.71□□□□□ -0.22
PCDHA9-202ENST00000532602 PTGS2P35354 604 aa13.71□□□□□ -0.22
PCDHA9-202ENST00000532602 LEXMQ3ZCV2 418 aa13.71□□□□□ -0.22
PCDHA9-202ENST00000532602 METTL11BQ5VVY1 283 aa13.71□□□□□ -0.22
PCDHA9-202ENST00000532602 MTFR2Q6P444 385 aa13.71□□□□□ -0.22
PCDHA9-202ENST00000532602 OR13C2Q8NGS9 318 aa13.71□□□□□ -0.22
PCDHA9-202ENST00000532602 FNDC9Q8TBE3 224 aa13.71□□□□□ -0.22
PCDHA9-202ENST00000532602 ZFAND1Q8TCF1 268 aa13.71□□□□□ -0.22
PCDHA9-202ENST00000532602 ZNF845Q96IR2 970 aaPredicted RBP13.71□□□□□ -0.22
PCDHA9-202ENST00000532602 H7C2Y5 167 aa13.7□□□□□ -0.22
PCDHA9-202ENST00000532602 UTS2O95399 124 aa13.7□□□□□ -0.22
PCDHA9-202ENST00000532602 FKBP2P26885 142 aaKnown RBP13.7□□□□□ -0.22
PCDHA9-202ENST00000532602 CAV3P56539 151 aa13.7□□□□□ -0.22
PCDHA9-202ENST00000532602 IL10RAQ13651 578 aa13.7□□□□□ -0.22
PCDHA9-202ENST00000532602 MSMO1Q15800 293 aa13.7□□□□□ -0.22
PCDHA9-202ENST00000532602 Q6ZS52 159 aa13.7□□□□□ -0.22
PCDHA9-202ENST00000532602 KIF18BQ86Y91 864 aa13.7□□□□□ -0.22
PCDHA9-202ENST00000532602 C4orf36Q96KX1 117 aa13.7□□□□□ -0.22
PCDHA9-202ENST00000532602 PLA2G2FQ9BZM2 168 aa13.7□□□□□ -0.22
PCDHA9-202ENST00000532602 MKRN2Q9H000 416 aaKnown RBP13.7□□□□□ -0.22
PCDHA9-202ENST00000532602 TRBV4-1A0A0J9YWV2 114 aa13.7□□□□□ -0.22
PCDHA9-202ENST00000532602 ZNF814B7Z6K7 855 aa13.7□□□□□ -0.22
PCDHA9-202ENST00000532602 ZNF587BE7ETH6 402 aa13.7□□□□□ -0.22
PCDHA9-202ENST00000532602 PYCR3Q53H96 274 aa13.7□□□□□ -0.22
PCDHA9-202ENST00000532602 FAM69AQ5T7M9 428 aa13.7□□□□□ -0.22
PCDHA9-202ENST00000532602 C6orf15Q6UXA7 325 aaPredicted RBP13.7□□□□□ -0.22
PCDHA9-202ENST00000532602 B3GNT7Q8NFL0 401 aa13.7□□□□□ -0.22
PCDHA9-202ENST00000532602 ZNF681Q96N22 645 aa13.7□□□□□ -0.22
PCDHA9-202ENST00000532602 PCDHGA8Q9Y5G5 932 aa13.7□□□□□ -0.22
PCDHA9-202ENST00000532602 MEIS3P1A6NDR6 274 aa13.7□□□□□ -0.22
PCDHA9-202ENST00000532602 RNF212BA8MTL3 300 aa13.7□□□□□ -0.22
PCDHA9-202ENST00000532602 SLC34A2O95436 690 aa13.7□□□□□ -0.22
PCDHA9-202ENST00000532602 TK1P04183 234 aa13.7□□□□□ -0.22
PCDHA9-202ENST00000532602 GIPRP48546 466 aa13.7□□□□□ -0.22
PCDHA9-202ENST00000532602 EXOSC6Q5RKV6 272 aaKnown RBP13.7□□□□□ -0.22
PCDHA9-202ENST00000532602 AADACL4Q5VUY2 407 aa13.7□□□□□ -0.22
PCDHA9-202ENST00000532602 RPL22L1Q6P5R6 122 aaKnown RBP13.7□□□□□ -0.22
PCDHA9-202ENST00000532602 TBPL2Q6SJ96 375 aa13.7□□□□□ -0.22
PCDHA9-202ENST00000532602 CLEC14AQ86T13 490 aa13.7□□□□□ -0.22
PCDHA9-202ENST00000532602 OR4N2Q8NGD1 307 aa13.7□□□□□ -0.22
PCDHA9-202ENST00000532602 ITFG2Q969R8 447 aa13.7□□□□□ -0.22
PCDHA9-202ENST00000532602 ELF4Q99607 663 aaPredicted RBP13.7□□□□□ -0.22
PCDHA9-202ENST00000532602 RREB1Q92766 1687 aa13.7□□□□□ -0.22
PCDHA9-202ENST00000532602 TMED7-TICAM2A0A0A6YYA0 188 aa13.7□□□□□ -0.22
PCDHA9-202ENST00000532602 PCP4L1A6NKN8 68 aa13.7□□□□□ -0.22
PCDHA9-202ENST00000532602 SHOXO15266 292 aa13.7□□□□□ -0.22
PCDHA9-202ENST00000532602 LYRM1O43325 122 aa13.7□□□□□ -0.22
PCDHA9-202ENST00000532602 B4GAT1O43505 415 aa13.7□□□□□ -0.22
PCDHA9-202ENST00000532602 ITGAMP11215 1152 aa13.7□□□□□ -0.22
PCDHA9-202ENST00000532602 RPL23AP62750 156 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms