RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 WDR45Q9Y484 360 aa6.24□□□□□ -1.41
TRIM53CP-201ENST00000531490 USF3Q68DE3 2245 aa6.24□□□□□ -1.41
TRIM53CP-201ENST00000531490 A0A0J9YW62 118 aa6.23□□□□□ -1.41
TRIM53CP-201ENST00000531490 CCT8L1PA6NM43 557 aa6.23□□□□□ -1.41
TRIM53CP-201ENST00000531490 ZNF561-AS1K7EIQ3 104 aa6.23□□□□□ -1.41
TRIM53CP-201ENST00000531490 CLIC1O00299 241 aa6.23□□□□□ -1.41
TRIM53CP-201ENST00000531490 NR5A2O00482 541 aa6.23□□□□□ -1.41
TRIM53CP-201ENST00000531490 ZNF264O43296 627 aa6.23□□□□□ -1.41
TRIM53CP-201ENST00000531490 KIAA0513O60268 411 aa6.23□□□□□ -1.41
TRIM53CP-201ENST00000531490 AQP8O94778 261 aa6.23□□□□□ -1.41
TRIM53CP-201ENST00000531490 ANP32DO95626 131 aa6.23□□□□□ -1.41
TRIM53CP-201ENST00000531490 CNOT4O95628 575 aaKnown RBP6.23□□□□□ -1.41
TRIM53CP-201ENST00000531490 NUDT14O95848 222 aa6.23□□□□□ -1.41
TRIM53CP-201ENST00000531490 AK1P00568 194 aa6.23□□□□□ -1.41
TRIM53CP-201ENST00000531490 TFPTP0C1Z6 253 aa6.23□□□□□ -1.41
TRIM53CP-201ENST00000531490 UBTFL6P0CB48 400 aaPredicted RBP6.23□□□□□ -1.41
TRIM53CP-201ENST00000531490 NR2F1P10589 423 aa6.23□□□□□ -1.41
TRIM53CP-201ENST00000531490 CTSSP25774 331 aa6.23□□□□□ -1.41
TRIM53CP-201ENST00000531490 RYKP34925 604 aa6.23□□□□□ -1.41
TRIM53CP-201ENST00000531490 PGM1P36871 562 aa6.23□□□□□ -1.41
TRIM53CP-201ENST00000531490 CRATP43155 626 aa6.23□□□□□ -1.41
TRIM53CP-201ENST00000531490 MRPL19P49406 292 aaKnown RBP6.23□□□□□ -1.41
TRIM53CP-201ENST00000531490 KCNJ10P78508 379 aa6.23□□□□□ -1.41
TRIM53CP-201ENST00000531490 FOXF1Q12946 379 aa6.23□□□□□ -1.41
TRIM53CP-201ENST00000531490 SKP2Q13309 424 aa6.23□□□□□ -1.41
TRIM53CP-201ENST00000531490 RCAN2Q14206 197 aa6.23□□□□□ -1.41
TRIM53CP-201ENST00000531490 RGNQ15493 299 aa6.23□□□□□ -1.41
TRIM53CP-201ENST00000531490 CTU2Q2VPK5 515 aaKnown RBP6.23□□□□□ -1.41
TRIM53CP-201ENST00000531490 C6orf10Q5SRN2 563 aa6.23□□□□□ -1.41
TRIM53CP-201ENST00000531490 ATAD3BQ5T9A4 648 aa6.23□□□□□ -1.41
TRIM53CP-201ENST00000531490 DLEU7Q6UYE1 221 aa6.23□□□□□ -1.41
TRIM53CP-201ENST00000531490 TRPM8Q7Z2W7 1104 aa6.23□□□□□ -1.41
TRIM53CP-201ENST00000531490 LUZP2Q86TE4 346 aa6.23□□□□□ -1.41
TRIM53CP-201ENST00000531490 KIF18BQ86Y91 864 aa6.23□□□□□ -1.41
TRIM53CP-201ENST00000531490 MISPQ8IVT2 679 aa6.23□□□□□ -1.41
TRIM53CP-201ENST00000531490 GTPBP8Q8N3Z3 284 aaPredicted RBP6.23□□□□□ -1.41
TRIM53CP-201ENST00000531490 TRIML2Q8N7C3 387 aa6.23□□□□□ -1.41
TRIM53CP-201ENST00000531490 ZNF527Q8NB42 609 aa6.23□□□□□ -1.41
TRIM53CP-201ENST00000531490 ATP6V1C2Q8NEY4 427 aa6.23□□□□□ -1.41
TRIM53CP-201ENST00000531490 FNDC9Q8TBE3 224 aa6.23□□□□□ -1.41
TRIM53CP-201ENST00000531490 SLC38A5Q8WUX1 472 aa6.23□□□□□ -1.41
TRIM53CP-201ENST00000531490 CNOT9Q92600 299 aaKnown RBP6.23□□□□□ -1.41
TRIM53CP-201ENST00000531490 OSTF1Q92882 214 aa6.23□□□□□ -1.41
TRIM53CP-201ENST00000531490 MAL2Q969L2 176 aa6.23□□□□□ -1.41
TRIM53CP-201ENST00000531490 SPDL1Q96EA4 605 aa6.23□□□□□ -1.41
TRIM53CP-201ENST00000531490 LRRC46Q96FV0 321 aa6.23□□□□□ -1.41
TRIM53CP-201ENST00000531490 ADGRG7Q96K78 797 aa6.23□□□□□ -1.41
TRIM53CP-201ENST00000531490 TRNT1Q96Q11 434 aaKnown RBP6.23□□□□□ -1.41
TRIM53CP-201ENST00000531490 TMEM120AQ9BXJ8 343 aa6.23□□□□□ -1.41
TRIM53CP-201ENST00000531490 PINK1Q9BXM7 581 aa6.23□□□□□ -1.41
TRIM53CP-201ENST00000531490 LAT2Q9GZY6 243 aa6.23□□□□□ -1.41
TRIM53CP-201ENST00000531490 RABEP2Q9H5N1 569 aa6.23□□□□□ -1.41
TRIM53CP-201ENST00000531490 IKZF5Q9H5V7 419 aa6.23□□□□□ -1.41
TRIM53CP-201ENST00000531490 RMND5AQ9H871 391 aa6.23□□□□□ -1.41
TRIM53CP-201ENST00000531490 MTHFD2LQ9H903 347 aaPredicted RBP6.23□□□□□ -1.41
TRIM53CP-201ENST00000531490 UBTD1Q9HAC8 227 aa6.23□□□□□ -1.41
TRIM53CP-201ENST00000531490 RLIMQ9NVW2 624 aa6.23□□□□□ -1.41
TRIM53CP-201ENST00000531490 VAPAQ9P0L0 249 aa6.23□□□□□ -1.41
TRIM53CP-201ENST00000531490 CLCF1Q9UBD9 225 aa6.23□□□□□ -1.41
TRIM53CP-201ENST00000531490 ZNF629Q9UEG4 869 aaPredicted RBP6.23□□□□□ -1.41
TRIM53CP-201ENST00000531490 AP4B1Q9Y6B7 739 aa6.23□□□□□ -1.41
TRIM53CP-201ENST00000531490 A0A087WZY1 265 aa6.22□□□□□ -1.41
TRIM53CP-201ENST00000531490 A0A096LPI6 279 aa6.22□□□□□ -1.41
TRIM53CP-201ENST00000531490 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.22□□□□□ -1.41
TRIM53CP-201ENST00000531490 AGAP5A6NIR3 686 aa6.22□□□□□ -1.41
TRIM53CP-201ENST00000531490 H3BNH8 94 aa6.22□□□□□ -1.41
TRIM53CP-201ENST00000531490 TNFSF11O14788 317 aa6.22□□□□□ -1.41
TRIM53CP-201ENST00000531490 ADAMDEC1O15204 470 aa6.22□□□□□ -1.41
TRIM53CP-201ENST00000531490 GSTA4O15217 222 aa6.22□□□□□ -1.41
TRIM53CP-201ENST00000531490 CXCL13O43927 109 aa6.22□□□□□ -1.41
TRIM53CP-201ENST00000531490 EIF4E2O60573 245 aaKnown RBP6.22□□□□□ -1.41
TRIM53CP-201ENST00000531490 HNRNPCL1O60812 293 aaKnown RBP6.22□□□□□ -1.41
TRIM53CP-201ENST00000531490 TNFSF13O75888 250 aa6.22□□□□□ -1.41
TRIM53CP-201ENST00000531490 NTN1O95631 604 aa6.22□□□□□ -1.41
TRIM53CP-201ENST00000531490 KRT75O95678 551 aa6.22□□□□□ -1.41
TRIM53CP-201ENST00000531490 AGR2O95994 175 aa6.22□□□□□ -1.41
TRIM53CP-201ENST00000531490 CSTAP01040 98 aa6.22□□□□□ -1.41
TRIM53CP-201ENST00000531490 GUSBP08236 651 aa6.22□□□□□ -1.41
TRIM53CP-201ENST00000531490 TMIGD3P0DMS9 266 aaPredicted RBP6.22□□□□□ -1.41
TRIM53CP-201ENST00000531490 SFTPDP35247 375 aa6.22□□□□□ -1.41
TRIM53CP-201ENST00000531490 GCKP35557 465 aa6.22□□□□□ -1.41
TRIM53CP-201ENST00000531490 KHKP50053 298 aa6.22□□□□□ -1.41
TRIM53CP-201ENST00000531490 RASSF2P50749 326 aa6.22□□□□□ -1.41
TRIM53CP-201ENST00000531490 ZNF41P51814 821 aaPredicted RBP6.22□□□□□ -1.41
TRIM53CP-201ENST00000531490 SESN3P58005 492 aa6.22□□□□□ -1.41
TRIM53CP-201ENST00000531490 STX1BP61266 288 aa6.22□□□□□ -1.41
TRIM53CP-201ENST00000531490 SORDQ00796 357 aa6.22□□□□□ -1.41
TRIM53CP-201ENST00000531490 LRRC74AQ0VAA2 488 aa6.22□□□□□ -1.41
TRIM53CP-201ENST00000531490 FGFBP1Q14512 234 aa6.22□□□□□ -1.41
TRIM53CP-201ENST00000531490 PON3Q15166 354 aa6.22□□□□□ -1.41
TRIM53CP-201ENST00000531490 QPRTQ15274 297 aa6.22□□□□□ -1.41
TRIM53CP-201ENST00000531490 TMEM176BQ3YBM2 270 aaPredicted RBP6.22□□□□□ -1.41
TRIM53CP-201ENST00000531490 LRIF1Q5T3J3 769 aa6.22□□□□□ -1.41
TRIM53CP-201ENST00000531490 VWA1Q6PCB0 445 aa6.22□□□□□ -1.41
TRIM53CP-201ENST00000531490 LRRC74BQ6ZQY2 392 aa6.22□□□□□ -1.41
TRIM53CP-201ENST00000531490 EIF3MQ7L2H7 374 aaKnown RBP6.22□□□□□ -1.41
TRIM53CP-201ENST00000531490 CHMP1BQ7LBR1 199 aa6.22□□□□□ -1.41
TRIM53CP-201ENST00000531490 VRK2Q86Y07 508 aa6.22□□□□□ -1.41
TRIM53CP-201ENST00000531490 LRRC75A-AS1Q8N1F1 130 aa6.22□□□□□ -1.41
TRIM53CP-201ENST00000531490 ZNF619Q8N2I2 560 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms