RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 C2orf80Q0P641 193 aa7.02□□□□□ -1.29
CD44-232ENST00000531118 MERTKQ12866 999 aa7.02□□□□□ -1.29
CD44-232ENST00000531118 CDK5R2Q13319 367 aa7.02□□□□□ -1.29
CD44-232ENST00000531118 DAG1Q14118 895 aa7.02□□□□□ -1.29
CD44-232ENST00000531118 VAX1Q5SQQ9 334 aa7.02□□□□□ -1.29
CD44-232ENST00000531118 KPRPQ5T749 579 aaPredicted RBP7.02□□□□□ -1.29
CD44-232ENST00000531118 GRTP1Q5TC63 336 aa7.02□□□□□ -1.29
CD44-232ENST00000531118 OLFML2AQ68BL7 652 aa7.02□□□□□ -1.29
CD44-232ENST00000531118 FAM71E1Q6IPT2 247 aa7.02□□□□□ -1.29
CD44-232ENST00000531118 KRT80Q6KB66 452 aa7.02□□□□□ -1.29
CD44-232ENST00000531118 KLC3Q6P597 504 aa7.02□□□□□ -1.29
CD44-232ENST00000531118 LSRQ86X29 649 aaPredicted RBP7.02□□□□□ -1.29
CD44-232ENST00000531118 ADGRG3Q86Y34 549 aa7.02□□□□□ -1.29
CD44-232ENST00000531118 CCDC103Q8IW40 242 aa7.02□□□□□ -1.29
CD44-232ENST00000531118 MRPL41Q8IXM3 137 aaKnown RBP7.02□□□□□ -1.29
CD44-232ENST00000531118 GSPT2Q8IYD1 628 aaKnown RBP7.02□□□□□ -1.29
CD44-232ENST00000531118 BCL6BQ8N143 479 aaPredicted RBP7.02□□□□□ -1.29
CD44-232ENST00000531118 KIR3DL3Q8N743 410 aa7.02□□□□□ -1.29
CD44-232ENST00000531118 OR5W2Q8NH69 310 aa7.02□□□□□ -1.29
CD44-232ENST00000531118 ZNF483Q8TF39 744 aaPredicted RBP7.02□□□□□ -1.29
CD44-232ENST00000531118 ST8SIA1Q92185 356 aa7.02□□□□□ -1.29
CD44-232ENST00000531118 JADE3Q92613 823 aa7.02□□□□□ -1.29
CD44-232ENST00000531118 POP5Q969H6 163 aaKnown RBP7.02□□□□□ -1.29
CD44-232ENST00000531118 TMEM45BQ96B21 275 aa7.02□□□□□ -1.29
CD44-232ENST00000531118 PBKQ96KB5 322 aa7.02□□□□□ -1.29
CD44-232ENST00000531118 GPR78Q96P69 363 aa7.02□□□□□ -1.29
CD44-232ENST00000531118 RSPO3Q9BXY4 272 aaPredicted RBP7.02□□□□□ -1.29
CD44-232ENST00000531118 MOV10Q9HCE1 1003 aaKnown RBP7.02□□□□□ -1.29
CD44-232ENST00000531118 SERINC1Q9NRX5 453 aa7.02□□□□□ -1.29
CD44-232ENST00000531118 PLEK2Q9NYT0 353 aa7.02□□□□□ -1.29
CD44-232ENST00000531118 TAS2R7Q9NYW3 318 aa7.02□□□□□ -1.29
CD44-232ENST00000531118 REV1Q9UBZ9 1251 aa7.02□□□□□ -1.29
CD44-232ENST00000531118 NUP50Q9UKX7 468 aa7.02□□□□□ -1.29
CD44-232ENST00000531118 CMAHPQ9Y471 501 aa7.02□□□□□ -1.29
CD44-232ENST00000531118 SPIN1Q9Y657 262 aaPredicted RBP7.02□□□□□ -1.29
CD44-232ENST00000531118 NUP214P35658 2090 aaPredicted RBP7.02□□□□□ -1.29
CD44-232ENST00000531118 GTPBP1O00178 669 aaKnown RBP7.01□□□□□ -1.29
CD44-232ENST00000531118 NR5A2O00482 541 aa7.01□□□□□ -1.29
CD44-232ENST00000531118 PDPK1O15530 556 aa7.01□□□□□ -1.29
CD44-232ENST00000531118 EIF4E2O60573 245 aaKnown RBP7.01□□□□□ -1.29
CD44-232ENST00000531118 KLHL2O95198 593 aa7.01□□□□□ -1.29
CD44-232ENST00000531118 KRT6AP02538 564 aa7.01□□□□□ -1.29
CD44-232ENST00000531118 KRT6BP04259 564 aa7.01□□□□□ -1.29
CD44-232ENST00000531118 C2P06681 752 aa7.01□□□□□ -1.29
CD44-232ENST00000531118 ALOX5P09917 674 aa7.01□□□□□ -1.29
CD44-232ENST00000531118 ATP6V1C1P21283 382 aa7.01□□□□□ -1.29
CD44-232ENST00000531118 KRT6CP48668 564 aa7.01□□□□□ -1.29
CD44-232ENST00000531118 KRTAP10-3P60369 221 aa7.01□□□□□ -1.29
CD44-232ENST00000531118 MVKQ03426 396 aa7.01□□□□□ -1.29
CD44-232ENST00000531118 SKP2Q13309 424 aa7.01□□□□□ -1.29
CD44-232ENST00000531118 MAD2L1BPQ15013 274 aaPredicted RBP7.01□□□□□ -1.29
CD44-232ENST00000531118 KLHL26Q53HC5 615 aa7.01□□□□□ -1.29
CD44-232ENST00000531118 KLF17Q5JT82 389 aaPredicted RBP7.01□□□□□ -1.29
CD44-232ENST00000531118 OTUD3Q5T2D3 398 aaPredicted RBP7.01□□□□□ -1.29
CD44-232ENST00000531118 CDC73Q6P1J9 531 aa7.01□□□□□ -1.29
CD44-232ENST00000531118 LRIG3Q6UXM1 1119 aa7.01□□□□□ -1.29
CD44-232ENST00000531118 ABHD12BQ7Z5M8 362 aaPredicted RBP7.01□□□□□ -1.29
CD44-232ENST00000531118 CCDC91Q7Z6B0 441 aa7.01□□□□□ -1.29
CD44-232ENST00000531118 FAM169BQ8N8A8 192 aa7.01□□□□□ -1.29
CD44-232ENST00000531118 POMGNT2Q8NAT1 580 aa7.01□□□□□ -1.29
CD44-232ENST00000531118 DEFB108BQ8NET1 73 aa7.01□□□□□ -1.29
CD44-232ENST00000531118 OR4F5Q8NH21 305 aa7.01□□□□□ -1.29
CD44-232ENST00000531118 MRAPQ8TCY5 172 aa7.01□□□□□ -1.29
CD44-232ENST00000531118 CDS1Q92903 461 aa7.01□□□□□ -1.29
CD44-232ENST00000531118 ARL5BQ96KC2 179 aa7.01□□□□□ -1.29
CD44-232ENST00000531118 ZNF317Q96PQ6 595 aaPredicted RBP7.01□□□□□ -1.29
CD44-232ENST00000531118 SYT3Q9BQG1 590 aa7.01□□□□□ -1.29
CD44-232ENST00000531118 BTBD2Q9BX70 525 aa7.01□□□□□ -1.29
CD44-232ENST00000531118 BEX1Q9HBH7 125 aa7.01□□□□□ -1.29
CD44-232ENST00000531118 TMEM45AQ9NWC5 275 aa7.01□□□□□ -1.29
CD44-232ENST00000531118 PARPBPQ9NWS1 579 aa7.01□□□□□ -1.29
CD44-232ENST00000531118 MYEF2Q9P2K5 600 aaKnown RBP7.01□□□□□ -1.29
CD44-232ENST00000531118 CHRNA9Q9UGM1 479 aa7.01□□□□□ -1.29
CD44-232ENST00000531118 HDGFL3Q9Y3E1 203 aa7.01□□□□□ -1.29
CD44-232ENST00000531118 ZNF587BE7ETH6 402 aa7□□□□□ -1.29
CD44-232ENST00000531118 NPIPB9F8W1W9 429 aa7□□□□□ -1.29
CD44-232ENST00000531118 ZNF264O43296 627 aa7□□□□□ -1.29
CD44-232ENST00000531118 DNAJA2O60884 412 aa7□□□□□ -1.29
CD44-232ENST00000531118 SKAP2O75563 359 aaPredicted RBP7□□□□□ -1.29
CD44-232ENST00000531118 EVX1P49640 407 aa7□□□□□ -1.29
CD44-232ENST00000531118 ATP4BP51164 291 aa7□□□□□ -1.29
CD44-232ENST00000531118 SEC24CP53992 1094 aa7□□□□□ -1.29
CD44-232ENST00000531118 CDH13P55290 713 aa7□□□□□ -1.29
CD44-232ENST00000531118 SESN3P58005 492 aa7□□□□□ -1.29
CD44-232ENST00000531118 OR2B6P58173 313 aa7□□□□□ -1.29
CD44-232ENST00000531118 LCN2P80188 198 aa7□□□□□ -1.29
CD44-232ENST00000531118 BTKQ06187 659 aa7□□□□□ -1.29
CD44-232ENST00000531118 NPRL3Q12980 569 aa7□□□□□ -1.29
CD44-232ENST00000531118 SLC17A1Q14916 467 aa7□□□□□ -1.29
CD44-232ENST00000531118 ATP6AP1LQ52LC2 224 aa7□□□□□ -1.29
CD44-232ENST00000531118 ZNF362Q5T0B9 420 aaPredicted RBP7□□□□□ -1.29
CD44-232ENST00000531118 DCST2Q5T1A1 773 aa7□□□□□ -1.29
CD44-232ENST00000531118 GAS2L3Q86XJ1 694 aa7□□□□□ -1.29
CD44-232ENST00000531118 WDFY1Q8IWB7 410 aa7□□□□□ -1.29
CD44-232ENST00000531118 ZFP28Q8NHY6 868 aa7□□□□□ -1.29
CD44-232ENST00000531118 FAM110DQ8TAY7 271 aaPredicted RBP7□□□□□ -1.29
CD44-232ENST00000531118 MAGEE2Q8TD90 523 aaPredicted RBP7□□□□□ -1.29
CD44-232ENST00000531118 ACTRT1Q8TDG2 376 aa7□□□□□ -1.29
CD44-232ENST00000531118 PYROXD1Q8WU10 500 aa7□□□□□ -1.29
CD44-232ENST00000531118 BCL2L2Q92843 193 aaPredicted RBP7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms