RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 TBRG1Q3YBR2 411 aa12.99□□□□□ -0.33
CAPN1-219ENST00000530495 IQCCQ4KMZ1 466 aa12.99□□□□□ -0.33
CAPN1-219ENST00000530495 LIPNQ5VXI9 398 aa12.99□□□□□ -0.33
CAPN1-219ENST00000530495 TMEM225Q6GV28 225 aa12.99□□□□□ -0.33
CAPN1-219ENST00000530495 ANKRD16Q6P6B7 361 aa12.99□□□□□ -0.33
CAPN1-219ENST00000530495 LRRC74BQ6ZQY2 392 aa12.99□□□□□ -0.33
CAPN1-219ENST00000530495 SLC46A3Q7Z3Q1 461 aa12.99□□□□□ -0.33
CAPN1-219ENST00000530495 LSRQ86X29 649 aaPredicted RBP12.99□□□□□ -0.33
CAPN1-219ENST00000530495 ANKS4BQ8N8V4 417 aa12.99□□□□□ -0.33
CAPN1-219ENST00000530495 OR1K1Q8NGR3 316 aa12.99□□□□□ -0.33
CAPN1-219ENST00000530495 PPP1R36Q96LQ0 422 aa12.99□□□□□ -0.33
CAPN1-219ENST00000530495 PLK3Q9H4B4 646 aa12.99□□□□□ -0.33
CAPN1-219ENST00000530495 BTNL2Q9UIR0 455 aa12.99□□□□□ -0.33
CAPN1-219ENST00000530495 ITM2AO43736 263 aa12.98□□□□□ -0.33
CAPN1-219ENST00000530495 KRT33AO76009 404 aa12.98□□□□□ -0.33
CAPN1-219ENST00000530495 DBIP07108 87 aaKnown RBP12.98□□□□□ -0.33
CAPN1-219ENST00000530495 CHRM4P08173 479 aa12.98□□□□□ -0.33
CAPN1-219ENST00000530495 OR4A8P0C604 315 aa12.98□□□□□ -0.33
CAPN1-219ENST00000530495 UQCRBP14927 111 aa12.98□□□□□ -0.33
CAPN1-219ENST00000530495 CREB1P16220 341 aa12.98□□□□□ -0.33
CAPN1-219ENST00000530495 IL7RP16871 459 aa12.98□□□□□ -0.33
CAPN1-219ENST00000530495 CXCR1P25024 350 aa12.98□□□□□ -0.33
CAPN1-219ENST00000530495 TXNL4AP83876 142 aaKnown RBP12.98□□□□□ -0.33
CAPN1-219ENST00000530495 GNA13Q14344 377 aa12.98□□□□□ -0.33
CAPN1-219ENST00000530495 OR7A5Q15622 319 aa12.98□□□□□ -0.33
CAPN1-219ENST00000530495 PDCD2Q16342 344 aaPredicted RBP12.98□□□□□ -0.33
CAPN1-219ENST00000530495 CARTPTQ16568 116 aa12.98□□□□□ -0.33
CAPN1-219ENST00000530495 DPY19L1Q2PZI1 675 aa12.98□□□□□ -0.33
CAPN1-219ENST00000530495 SPANXN4Q5MJ08 99 aa12.98□□□□□ -0.33
CAPN1-219ENST00000530495 CREB3L2Q70SY1 520 aa12.98□□□□□ -0.33
CAPN1-219ENST00000530495 SPATA19Q7Z5L4 167 aa12.98□□□□□ -0.33
CAPN1-219ENST00000530495 RNF130Q86XS8 419 aa12.98□□□□□ -0.33
CAPN1-219ENST00000530495 NUDCD3Q8IVD9 361 aa12.98□□□□□ -0.33
CAPN1-219ENST00000530495 ZNF781Q8N8C0 355 aa12.98□□□□□ -0.33
CAPN1-219ENST00000530495 WDR60Q8WVS4 1066 aa12.98□□□□□ -0.33
CAPN1-219ENST00000530495 BCL2L2Q92843 193 aaPredicted RBP12.98□□□□□ -0.33
CAPN1-219ENST00000530495 CCDC115Q96NT0 180 aa12.98□□□□□ -0.33
CAPN1-219ENST00000530495 ZNF317Q96PQ6 595 aaPredicted RBP12.98□□□□□ -0.33
CAPN1-219ENST00000530495 KCNS3Q9BQ31 491 aa12.98□□□□□ -0.33
CAPN1-219ENST00000530495 SOX7Q9BT81 388 aa12.98□□□□□ -0.33
CAPN1-219ENST00000530495 CRNNQ9UBG3 495 aaPredicted RBP12.98□□□□□ -0.33
CAPN1-219ENST00000530495 FBXO9Q9UK97 447 aaPredicted RBP12.98□□□□□ -0.33
CAPN1-219ENST00000530495 ARPC4-TTLL3A0A0A6YYG9 625 aa12.97□□□□□ -0.33
CAPN1-219ENST00000530495 CCDC154A6NI56 674 aa12.97□□□□□ -0.33
CAPN1-219ENST00000530495 OR6C65A6NJZ3 312 aa12.97□□□□□ -0.33
CAPN1-219ENST00000530495 TYROBPO43914 113 aa12.97□□□□□ -0.33
CAPN1-219ENST00000530495 VAMP5O95183 116 aa12.97□□□□□ -0.33
CAPN1-219ENST00000530495 LGI1O95970 557 aa12.97□□□□□ -0.33
CAPN1-219ENST00000530495 IGLV1-44P01699 117 aa12.97□□□□□ -0.33
CAPN1-219ENST00000530495 PGRP06401 933 aa12.97□□□□□ -0.33
CAPN1-219ENST00000530495 MYZAPP0CAP1 466 aa12.97□□□□□ -0.33
CAPN1-219ENST00000530495 GIFP27352 417 aa12.97□□□□□ -0.33
CAPN1-219ENST00000530495 S100A3P33764 101 aa12.97□□□□□ -0.33
CAPN1-219ENST00000530495 PPOXP50336 477 aa12.97□□□□□ -0.33
CAPN1-219ENST00000530495 IDH3GP51553 393 aaPredicted RBP12.97□□□□□ -0.33
CAPN1-219ENST00000530495 P2RY4P51582 365 aa12.97□□□□□ -0.33
CAPN1-219ENST00000530495 CLNS1AP54105 237 aaKnown RBP12.97□□□□□ -0.33
CAPN1-219ENST00000530495 NAAAQ02083 359 aa12.97□□□□□ -0.33
CAPN1-219ENST00000530495 ZSWIM7Q19AV6 140 aa12.97□□□□□ -0.33
CAPN1-219ENST00000530495 CR1LQ2VPA4 569 aa12.97□□□□□ -0.33
CAPN1-219ENST00000530495 FAM174BQ3ZCQ3 159 aa12.97□□□□□ -0.33
CAPN1-219ENST00000530495 MRPL2Q5T653 305 aaKnown RBP12.97□□□□□ -0.33
CAPN1-219ENST00000530495 GPAT4Q86UL3 456 aa12.97□□□□□ -0.33
CAPN1-219ENST00000530495 ZNF440Q8IYI8 595 aa12.97□□□□□ -0.33
CAPN1-219ENST00000530495 LRRC34Q8IZ02 419 aa12.97□□□□□ -0.33
CAPN1-219ENST00000530495 FAM169BQ8N8A8 192 aa12.97□□□□□ -0.33
CAPN1-219ENST00000530495 MAGEE2Q8TD90 523 aaPredicted RBP12.97□□□□□ -0.33
CAPN1-219ENST00000530495 ROPN1BQ9BZX4 212 aaPredicted RBP12.97□□□□□ -0.33
CAPN1-219ENST00000530495 BPESC1Q9GZL8 116 aa12.97□□□□□ -0.33
CAPN1-219ENST00000530495 RAB1BQ9H0U4 201 aa12.97□□□□□ -0.33
CAPN1-219ENST00000530495 ROPN1Q9HAT0 212 aaPredicted RBP12.97□□□□□ -0.33
CAPN1-219ENST00000530495 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.97□□□□□ -0.33
CAPN1-219ENST00000530495 CDHR4A6H8M9 788 aa12.96□□□□□ -0.33
CAPN1-219ENST00000530495 A8MVM7 634 aa12.96□□□□□ -0.33
CAPN1-219ENST00000530495 ZNF587BE7ETH6 402 aa12.96□□□□□ -0.33
CAPN1-219ENST00000530495 E9PBE3 544 aa12.96□□□□□ -0.33
CAPN1-219ENST00000530495 NR5A2O00482 541 aa12.96□□□□□ -0.33
CAPN1-219ENST00000530495 STAMBPO95630 424 aa12.96□□□□□ -0.33
CAPN1-219ENST00000530495 TACSTD2P09758 323 aa12.96□□□□□ -0.33
CAPN1-219ENST00000530495 CECR9P0C854 216 aa12.96□□□□□ -0.33
CAPN1-219ENST00000530495 HOXB1P14653 301 aaPredicted RBP12.96□□□□□ -0.33
CAPN1-219ENST00000530495 ACAA2P42765 397 aaKnown RBP12.96□□□□□ -0.33
CAPN1-219ENST00000530495 SELENOPP49908 381 aa12.96□□□□□ -0.33
CAPN1-219ENST00000530495 RPL14P50914 215 aaKnown RBP12.96□□□□□ -0.33
CAPN1-219ENST00000530495 ANXA11P50995 505 aaKnown RBP12.96□□□□□ -0.33
CAPN1-219ENST00000530495 UBE2NP61088 152 aaKnown RBP12.96□□□□□ -0.33
CAPN1-219ENST00000530495 ABCE1P61221 599 aaKnown RBP12.96□□□□□ -0.33
CAPN1-219ENST00000530495 LGALS3BPQ08380 585 aa12.96□□□□□ -0.33
CAPN1-219ENST00000530495 LINGO2Q7L985 606 aa12.96□□□□□ -0.33
CAPN1-219ENST00000530495 RFLNBQ8N5W9 214 aa12.96□□□□□ -0.33
CAPN1-219ENST00000530495 TRIML2Q8N7C3 387 aa12.96□□□□□ -0.33
CAPN1-219ENST00000530495 NUP37Q8NFH4 326 aa12.96□□□□□ -0.33
CAPN1-219ENST00000530495 OR4F15Q8NGB8 312 aa12.96□□□□□ -0.33
CAPN1-219ENST00000530495 HPS1Q92902 700 aa12.96□□□□□ -0.33
CAPN1-219ENST00000530495 PANX1Q96RD7 426 aa12.96□□□□□ -0.33
CAPN1-219ENST00000530495 LINC00470Q9BZP3 86 aa12.96□□□□□ -0.33
CAPN1-219ENST00000530495 C20orf27Q9GZN8 174 aa12.96□□□□□ -0.33
CAPN1-219ENST00000530495 MOV10Q9HCE1 1003 aaKnown RBP12.96□□□□□ -0.33
CAPN1-219ENST00000530495 RLIMQ9NVW2 624 aa12.96□□□□□ -0.33
CAPN1-219ENST00000530495 ADPRHL2Q9NX46 363 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms