RNA–Protein interactions for RNA: ENST00000529476.1

USF1-209, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-209ENST00000529476 DHRS12A0PJE2 317 aa12.52□□□□□ -0.41
USF1-209ENST00000529476 FTCDNL1E5RQL4 147 aa12.52□□□□□ -0.41
USF1-209ENST00000529476 SMAD9O15198 467 aaKnown RBP12.52□□□□□ -0.41
USF1-209ENST00000529476 CIB2O75838 187 aa12.52□□□□□ -0.41
USF1-209ENST00000529476 TIMP3P35625 211 aa12.52□□□□□ -0.41
USF1-209ENST00000529476 MAGEA2P43356 314 aa12.52□□□□□ -0.41
USF1-209ENST00000529476 UGT2B15P54855 530 aa12.52□□□□□ -0.41
USF1-209ENST00000529476 SLC35A1P78382 337 aa12.52□□□□□ -0.41
USF1-209ENST00000529476 TRAM2Q15035 370 aa12.52□□□□□ -0.41
USF1-209ENST00000529476 C5orf46Q6UWT4 87 aa12.52□□□□□ -0.41
USF1-209ENST00000529476 PIWIL3Q7Z3Z3 882 aaKnown RBP12.52□□□□□ -0.41
USF1-209ENST00000529476 NAXEQ8NCW5 288 aa12.52□□□□□ -0.41
USF1-209ENST00000529476 SSC4DQ8WTU2 575 aa12.52□□□□□ -0.41
USF1-209ENST00000529476 TMEM239Q8WW34 195 aa12.52□□□□□ -0.41
USF1-209ENST00000529476 RND1Q92730 232 aa12.52□□□□□ -0.41
USF1-209ENST00000529476 POP5Q969H6 163 aaKnown RBP12.52□□□□□ -0.41
USF1-209ENST00000529476 SLC25A36Q96CQ1 311 aa12.52□□□□□ -0.41
USF1-209ENST00000529476 EPYCQ99645 322 aa12.52□□□□□ -0.41
USF1-209ENST00000529476 TM9SF2Q99805 663 aa12.52□□□□□ -0.41
USF1-209ENST00000529476 TAPBPLQ9BX59 468 aa12.52□□□□□ -0.41
USF1-209ENST00000529476 NMNAT1Q9HAN9 279 aaPredicted RBP12.52□□□□□ -0.41
USF1-209ENST00000529476 TESMINQ9Y4I5 508 aa12.52□□□□□ -0.41
USF1-209ENST00000529476 PCNX1Q96RV3 2341 aa12.52□□□□□ -0.41
USF1-209ENST00000529476 C2CD3Q4AC94 2353 aa12.52□□□□□ -0.41
USF1-209ENST00000529476 A0A0G2JNJ9 132 aa12.51□□□□□ -0.41
USF1-209ENST00000529476 ZNF814B7Z6K7 855 aa12.51□□□□□ -0.41
USF1-209ENST00000529476 LRRN3E7EW58 273 aa12.51□□□□□ -0.41
USF1-209ENST00000529476 PIP5K1CO60331 668 aa12.51□□□□□ -0.41
USF1-209ENST00000529476 ZG16O60844 167 aa12.51□□□□□ -0.41
USF1-209ENST00000529476 IL2RAP01589 272 aa12.51□□□□□ -0.41
USF1-209ENST00000529476 GPIP06744 558 aa12.51□□□□□ -0.41
USF1-209ENST00000529476 H1F0P07305 194 aaKnown RBP12.51□□□□□ -0.41
USF1-209ENST00000529476 RAP2AP10114 183 aa12.51□□□□□ -0.41
USF1-209ENST00000529476 UMPSP11172 480 aa12.51□□□□□ -0.41
USF1-209ENST00000529476 FCGR2AP12318 317 aa12.51□□□□□ -0.41
USF1-209ENST00000529476 CBLP22681 906 aa12.51□□□□□ -0.41
USF1-209ENST00000529476 CEACAM8P31997 349 aaPredicted RBP12.51□□□□□ -0.41
USF1-209ENST00000529476 RBM34P42696 430 aaKnown RBP12.51□□□□□ -0.41
USF1-209ENST00000529476 AGFG1P52594 562 aaKnown RBP12.51□□□□□ -0.41
USF1-209ENST00000529476 LSM11P83369 360 aaKnown RBP eCLIP12.51□□□□□ -0.41
USF1-209ENST00000529476 SPIBQ01892 262 aa12.51□□□□□ -0.41
USF1-209ENST00000529476 LTBQ06643 244 aa12.51□□□□□ -0.41
USF1-209ENST00000529476 CCNIQ14094 377 aa12.51□□□□□ -0.41
USF1-209ENST00000529476 FAM69AQ5T7M9 428 aa12.51□□□□□ -0.41
USF1-209ENST00000529476 RIPPLY2Q5TAB7 128 aa12.51□□□□□ -0.41
USF1-209ENST00000529476 MTFR2Q6P444 385 aa12.51□□□□□ -0.41
USF1-209ENST00000529476 FCRLAQ7L513 359 aa12.51□□□□□ -0.41
USF1-209ENST00000529476 CCDC71Q8IV32 467 aaPredicted RBP12.51□□□□□ -0.41
USF1-209ENST00000529476 GCNT2Q8N0V5 402 aa12.51□□□□□ -0.41
USF1-209ENST00000529476 C10orf53Q8N6V4 93 aa12.51□□□□□ -0.41
USF1-209ENST00000529476 OR52J3Q8NH60 311 aa12.51□□□□□ -0.41
USF1-209ENST00000529476 PFN4Q8NHR9 129 aa12.51□□□□□ -0.41
USF1-209ENST00000529476 MFSD8Q8NHS3 518 aa12.51□□□□□ -0.41
USF1-209ENST00000529476 RNF128Q8TEB7 428 aa12.51□□□□□ -0.41
USF1-209ENST00000529476 INTS12Q96CB8 462 aaKnown RBP12.51□□□□□ -0.41
USF1-209ENST00000529476 ZHX1-C8orf76Q96EF9 292 aa12.51□□□□□ -0.41
USF1-209ENST00000529476 RSRC1Q96IZ7 334 aaKnown RBP12.51□□□□□ -0.41
USF1-209ENST00000529476 DHRS1Q96LJ7 313 aa12.51□□□□□ -0.41
USF1-209ENST00000529476 HS6ST2Q96MM7 605 aa12.51□□□□□ -0.41
USF1-209ENST00000529476 CHID1Q9BWS9 393 aa12.51□□□□□ -0.41
USF1-209ENST00000529476 RNF122Q9H9V4 155 aa12.51□□□□□ -0.41
USF1-209ENST00000529476 MEPEQ9NQ76 525 aaPredicted RBP12.51□□□□□ -0.41
USF1-209ENST00000529476 Q9UFV3 132 aa12.51□□□□□ -0.41
USF1-209ENST00000529476 RNF6Q9Y252 685 aa12.51□□□□□ -0.41
USF1-209ENST00000529476 TRBV4-1A0A0J9YWV2 114 aa12.5□□□□□ -0.41
USF1-209ENST00000529476 A0A1W2PRQ8 180 aa12.5□□□□□ -0.41
USF1-209ENST00000529476 DNPH1O43598 174 aa12.5□□□□□ -0.41
USF1-209ENST00000529476 OR2T1O43869 369 aa12.5□□□□□ -0.41
USF1-209ENST00000529476 RAMP1O60894 148 aa12.5□□□□□ -0.41
USF1-209ENST00000529476 AKR7A3O95154 331 aa12.5□□□□□ -0.41
USF1-209ENST00000529476 RCBTB2O95199 551 aa12.5□□□□□ -0.41
USF1-209ENST00000529476 BGLAPP02818 100 aa12.5□□□□□ -0.41
USF1-209ENST00000529476 TMIGD3P0DMS9 266 aaPredicted RBP12.5□□□□□ -0.41
USF1-209ENST00000529476 RRM2P31350 389 aa12.5□□□□□ -0.41
USF1-209ENST00000529476 PER3P56645 1201 aa12.5□□□□□ -0.41
USF1-209ENST00000529476 H3F3AP84243 136 aa12.5□□□□□ -0.41
USF1-209ENST00000529476 FOXF2Q12947 444 aa12.5□□□□□ -0.41
USF1-209ENST00000529476 DGCR6Q14129 220 aa12.5□□□□□ -0.41
USF1-209ENST00000529476 FGD3Q5JSP0 725 aa12.5□□□□□ -0.41
USF1-209ENST00000529476 PODNL1Q6PEZ8 512 aa12.5□□□□□ -0.41
USF1-209ENST00000529476 TBPL2Q6SJ96 375 aa12.5□□□□□ -0.41
USF1-209ENST00000529476 CCDC103Q8IW40 242 aa12.5□□□□□ -0.41
USF1-209ENST00000529476 TMEM99Q8N816 258 aa12.5□□□□□ -0.41
USF1-209ENST00000529476 OR6S1Q8NH40 331 aa12.5□□□□□ -0.41
USF1-209ENST00000529476 SLC7A13Q8TCU3 470 aa12.5□□□□□ -0.41
USF1-209ENST00000529476 ABHD3Q8WU67 409 aa12.5□□□□□ -0.41
USF1-209ENST00000529476 SLCO4A1Q96BD0 722 aa12.5□□□□□ -0.41
USF1-209ENST00000529476 MOGAT1Q96PD6 335 aa12.5□□□□□ -0.41
USF1-209ENST00000529476 ZNF347Q96SE7 839 aa12.5□□□□□ -0.41
USF1-209ENST00000529476 SLC19A3Q9BZV2 496 aa12.5□□□□□ -0.41
USF1-209ENST00000529476 ANKRD19PQ9H560 264 aa12.5□□□□□ -0.41
USF1-209ENST00000529476 C20orf141Q9NUB4 165 aa12.5□□□□□ -0.41
USF1-209ENST00000529476 KLHL13Q9P2N7 655 aa12.5□□□□□ -0.41
USF1-209ENST00000529476 SEC14L4Q9UDX3 406 aa12.5□□□□□ -0.41
USF1-209ENST00000529476 CLEC4AQ9UMR7 237 aa12.5□□□□□ -0.41
USF1-209ENST00000529476 MED31Q9Y3C7 131 aa12.5□□□□□ -0.41
USF1-209ENST00000529476 LRBAP50851 2863 aa12.5□□□□□ -0.41
USF1-209ENST00000529476 INTS1Q8N201 2190 aaKnown RBP12.49□□□□□ -0.41
USF1-209ENST00000529476 A0A087WUU8 490 aa12.49□□□□□ -0.41
USF1-209ENST00000529476 ERICH4A6NGS2 130 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms