RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 FAM214BQ7L5A3 538 aa7.52□□□□□ -1.21
SSBP3-212ENST00000528930 KIF18BQ86Y91 864 aa7.52□□□□□ -1.21
SSBP3-212ENST00000528930 MSRB3Q8IXL7 192 aa7.52□□□□□ -1.21
SSBP3-212ENST00000528930 TMCO5AQ8N6Q1 288 aa7.52□□□□□ -1.21
SSBP3-212ENST00000528930 CNEP1R1Q8N9A8 125 aa7.52□□□□□ -1.21
SSBP3-212ENST00000528930 ST8SIA1Q92185 356 aa7.52□□□□□ -1.21
SSBP3-212ENST00000528930 CNOT9Q92600 299 aaKnown RBP7.52□□□□□ -1.21
SSBP3-212ENST00000528930 PMM1Q92871 262 aa7.52□□□□□ -1.21
SSBP3-212ENST00000528930 OSTF1Q92882 214 aa7.52□□□□□ -1.21
SSBP3-212ENST00000528930 LRRC46Q96FV0 321 aa7.52□□□□□ -1.21
SSBP3-212ENST00000528930 THOC1Q96FV9 657 aaKnown RBP7.52□□□□□ -1.21
SSBP3-212ENST00000528930 SRXN1Q9BYN0 137 aa7.52□□□□□ -1.21
SSBP3-212ENST00000528930 OPN3Q9H1Y3 402 aaPredicted RBP7.52□□□□□ -1.21
SSBP3-212ENST00000528930 VCXQ9H320 206 aa7.52□□□□□ -1.21
SSBP3-212ENST00000528930 ZNF385DQ9H6B1 395 aa7.52□□□□□ -1.21
SSBP3-212ENST00000528930 MTHFD2LQ9H903 347 aaPredicted RBP7.52□□□□□ -1.21
SSBP3-212ENST00000528930 EXOSC3Q9NQT5 275 aaKnown RBP7.52□□□□□ -1.21
SSBP3-212ENST00000528930 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.52□□□□□ -1.21
SSBP3-212ENST00000528930 ACER3Q9NUN7 267 aa7.52□□□□□ -1.21
SSBP3-212ENST00000528930 ZNF701Q9NV72 531 aaPredicted RBP7.52□□□□□ -1.21
SSBP3-212ENST00000528930 TMEM45AQ9NWC5 275 aa7.52□□□□□ -1.21
SSBP3-212ENST00000528930 SLC25A37Q9NYZ2 338 aa7.52□□□□□ -1.21
SSBP3-212ENST00000528930 CCDC167Q9P0B6 97 aa7.52□□□□□ -1.21
SSBP3-212ENST00000528930 SLC35A3Q9Y2D2 325 aa7.52□□□□□ -1.21
SSBP3-212ENST00000528930 ARL2BPQ9Y2Y0 163 aa7.52□□□□□ -1.21
SSBP3-212ENST00000528930 ROS1P08922 2347 aa7.52□□□□□ -1.21
SSBP3-212ENST00000528930 DSPPQ9NZW4 1301 aa7.52□□□□□ -1.21
SSBP3-212ENST00000528930 A0A096LPI6 279 aa7.51□□□□□ -1.21
SSBP3-212ENST00000528930 TRBV5-3A0A0A0MS03 114 aa7.51□□□□□ -1.21
SSBP3-212ENST00000528930 CLIC1O00299 241 aa7.51□□□□□ -1.21
SSBP3-212ENST00000528930 SS18L1O75177 396 aaPredicted RBP7.51□□□□□ -1.21
SSBP3-212ENST00000528930 NR2F1P10589 423 aa7.51□□□□□ -1.21
SSBP3-212ENST00000528930 FCGR2AP12318 317 aa7.51□□□□□ -1.21
SSBP3-212ENST00000528930 ACADSP16219 412 aa7.51□□□□□ -1.21
SSBP3-212ENST00000528930 SRD5A1P18405 259 aa7.51□□□□□ -1.21
SSBP3-212ENST00000528930 PGCP20142 388 aa7.51□□□□□ -1.21
SSBP3-212ENST00000528930 CALB2P22676 271 aa7.51□□□□□ -1.21
SSBP3-212ENST00000528930 RASSF2P50749 326 aa7.51□□□□□ -1.21
SSBP3-212ENST00000528930 CARD18P57730 90 aa7.51□□□□□ -1.21
SSBP3-212ENST00000528930 DSTNP60981 165 aa7.51□□□□□ -1.21
SSBP3-212ENST00000528930 NCALDP61601 193 aa7.51□□□□□ -1.21
SSBP3-212ENST00000528930 SIRPAP78324 504 aa7.51□□□□□ -1.21
SSBP3-212ENST00000528930 FAM27E3Q08E93 113 aa7.51□□□□□ -1.21
SSBP3-212ENST00000528930 SELENBP1Q13228 472 aa7.51□□□□□ -1.21
SSBP3-212ENST00000528930 SQLEQ14534 574 aa7.51□□□□□ -1.21
SSBP3-212ENST00000528930 RGNQ15493 299 aa7.51□□□□□ -1.21
SSBP3-212ENST00000528930 ZNF239Q16600 458 aaKnown RBP7.51□□□□□ -1.21
SSBP3-212ENST00000528930 AGKQ53H12 422 aa7.51□□□□□ -1.21
SSBP3-212ENST00000528930 PDSS1Q5T2R2 415 aa7.51□□□□□ -1.21
SSBP3-212ENST00000528930 PLEKHM3Q6ZWE6 761 aa7.51□□□□□ -1.21
SSBP3-212ENST00000528930 LSRQ86X29 649 aaPredicted RBP7.51□□□□□ -1.21
SSBP3-212ENST00000528930 CMIPQ8IY22 773 aa7.51□□□□□ -1.21
SSBP3-212ENST00000528930 C10orf111Q8N326 155 aa7.51□□□□□ -1.21
SSBP3-212ENST00000528930 ZNF610Q8N9Z0 462 aa7.51□□□□□ -1.21
SSBP3-212ENST00000528930 SLC38A5Q8WUX1 472 aa7.51□□□□□ -1.21
SSBP3-212ENST00000528930 TMEM234Q8WY98 164 aa7.51□□□□□ -1.21
SSBP3-212ENST00000528930 PPP1R14BQ96C90 147 aa7.51□□□□□ -1.21
SSBP3-212ENST00000528930 GMPPAQ96IJ6 420 aaPredicted RBP7.51□□□□□ -1.21
SSBP3-212ENST00000528930 ZNF570Q96NI8 536 aa7.51□□□□□ -1.21
SSBP3-212ENST00000528930 CCDC106Q9BWC9 280 aa7.51□□□□□ -1.21
SSBP3-212ENST00000528930 RSPO3Q9BXY4 272 aaPredicted RBP7.51□□□□□ -1.21
SSBP3-212ENST00000528930 PRRG4Q9BZD6 226 aa7.51□□□□□ -1.21
SSBP3-212ENST00000528930 PAPOLBQ9NRJ5 636 aaKnown RBP7.51□□□□□ -1.21
SSBP3-212ENST00000528930 PLSCR4Q9NRQ2 329 aa7.51□□□□□ -1.21
SSBP3-212ENST00000528930 VAPAQ9P0L0 249 aa7.51□□□□□ -1.21
SSBP3-212ENST00000528930 P2RX2Q9UBL9 471 aa7.51□□□□□ -1.21
SSBP3-212ENST00000528930 MCTS1Q9ULC4 181 aaKnown RBP7.51□□□□□ -1.21
SSBP3-212ENST00000528930 CLEC4AQ9UMR7 237 aa7.51□□□□□ -1.21
SSBP3-212ENST00000528930 CHST2Q9Y4C5 530 aa7.51□□□□□ -1.21
SSBP3-212ENST00000528930 GMEB1Q9Y692 573 aa7.51□□□□□ -1.21
SSBP3-212ENST00000528930 A0A1W2PP18 115 aa7.5□□□□□ -1.21
SSBP3-212ENST00000528930 GJE1A6NN92 205 aa7.5□□□□□ -1.21
SSBP3-212ENST00000528930 NR5A2O00482 541 aa7.5□□□□□ -1.21
SSBP3-212ENST00000528930 AP3D1O14617 1153 aa7.5□□□□□ -1.21
SSBP3-212ENST00000528930 SYNGR4O95473 234 aa7.5□□□□□ -1.21
SSBP3-212ENST00000528930 BCHEP06276 602 aa7.5□□□□□ -1.21
SSBP3-212ENST00000528930 DBIP07108 87 aaKnown RBP7.5□□□□□ -1.21
SSBP3-212ENST00000528930 IL7RP16871 459 aa7.5□□□□□ -1.21
SSBP3-212ENST00000528930 RYKP34925 604 aa7.5□□□□□ -1.21
SSBP3-212ENST00000528930 CD79BP40259 229 aa7.5□□□□□ -1.21
SSBP3-212ENST00000528930 APOBEC1P41238 236 aaKnown RBP7.5□□□□□ -1.21
SSBP3-212ENST00000528930 CPA2P48052 419 aa7.5□□□□□ -1.21
SSBP3-212ENST00000528930 CRISP3P54108 245 aa7.5□□□□□ -1.21
SSBP3-212ENST00000528930 RAC3P60763 192 aa7.5□□□□□ -1.21
SSBP3-212ENST00000528930 HPCAP84074 193 aa7.5□□□□□ -1.21
SSBP3-212ENST00000528930 MERTKQ12866 999 aa7.5□□□□□ -1.21
SSBP3-212ENST00000528930 FADDQ13158 208 aa7.5□□□□□ -1.21
SSBP3-212ENST00000528930 RPS26P11Q5JNZ5 115 aaPredicted RBP7.5□□□□□ -1.21
SSBP3-212ENST00000528930 MRPL2Q5T653 305 aaKnown RBP7.5□□□□□ -1.21
SSBP3-212ENST00000528930 CGB2Q6NT52 195 aa7.5□□□□□ -1.21
SSBP3-212ENST00000528930 PPP4R4Q6NUP7 873 aa7.5□□□□□ -1.21
SSBP3-212ENST00000528930 C3orf33Q6P1S2 294 aa7.5□□□□□ -1.21
SSBP3-212ENST00000528930 DLEU7Q6UYE1 221 aa7.5□□□□□ -1.21
SSBP3-212ENST00000528930 ZNF836Q6ZNA1 936 aa7.5□□□□□ -1.21
SSBP3-212ENST00000528930 BEND4Q6ZU67 534 aa7.5□□□□□ -1.21
SSBP3-212ENST00000528930 C22orf34Q6ZV56 151 aa7.5□□□□□ -1.21
SSBP3-212ENST00000528930 VRK2Q86Y07 508 aa7.5□□□□□ -1.21
SSBP3-212ENST00000528930 ADGRG3Q86Y34 549 aa7.5□□□□□ -1.21
SSBP3-212ENST00000528930 C3orf56Q8N813 242 aa7.5□□□□□ -1.21
SSBP3-212ENST00000528930 ATP6V1C2Q8NEY4 427 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms