RNA–Protein interactions for RNA: ENST00000528773.1

SUSD1-208, Transcript of sushi domain containing 1, human

TSL 4

Gene SUSD1, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUSD1-208	ENST00000528773	HIKESHI	Q53FT3	197 aa		4.27	□□□□□ -1.73
SUSD1-208	ENST00000528773	UNC50	Q53HI1	259 aa		4.27	□□□□□ -1.73
SUSD1-208	ENST00000528773	CCNJ	Q5T5M9	372 aa		4.27	□□□□□ -1.73
SUSD1-208	ENST00000528773	FAHD2B	Q6P2I3	314 aa	Predicted RBP	4.27	□□□□□ -1.73
SUSD1-208	ENST00000528773	KLC3	Q6P597	504 aa		4.27	□□□□□ -1.73
SUSD1-208	ENST00000528773	LRIG3	Q6UXM1	1119 aa		4.27	□□□□□ -1.73
SUSD1-208	ENST00000528773	LINGO2	Q7L985	606 aa		4.27	□□□□□ -1.73
SUSD1-208	ENST00000528773	CCDC103	Q8IW40	242 aa		4.27	□□□□□ -1.73
SUSD1-208	ENST00000528773	CTAGE3P	Q8IX95	158 aa		4.27	□□□□□ -1.73
SUSD1-208	ENST00000528773	CDK20	Q8IZL9	346 aa		4.27	□□□□□ -1.73
SUSD1-208	ENST00000528773	UBE2J2	Q8N2K1	259 aa		4.27	□□□□□ -1.73
SUSD1-208	ENST00000528773	RIBC1	Q8N443	379 aa	Predicted RBP	4.27	□□□□□ -1.73
SUSD1-208	ENST00000528773	MMGT1	Q8N4V1	131 aa		4.27	□□□□□ -1.73
SUSD1-208	ENST00000528773	PSMA8	Q8TAA3	256 aa		4.27	□□□□□ -1.73
SUSD1-208	ENST00000528773	PIGX	Q8TBF5	258 aa		4.27	□□□□□ -1.73
SUSD1-208	ENST00000528773	PHOSPHO1	Q8TCT1	267 aa		4.27	□□□□□ -1.73
SUSD1-208	ENST00000528773	SLC25A43	Q8WUT9	341 aa	Predicted RBP	4.27	□□□□□ -1.73
SUSD1-208	ENST00000528773	YIPF5	Q969M3	257 aa		4.27	□□□□□ -1.73
SUSD1-208	ENST00000528773	FAM120B	Q96EK7	910 aa	Known RBP	4.27	□□□□□ -1.73
SUSD1-208	ENST00000528773	FAHD2A	Q96GK7	314 aa		4.27	□□□□□ -1.73
SUSD1-208	ENST00000528773	METTL2A	Q96IZ6	378 aa	Known RBP	4.27	□□□□□ -1.73
SUSD1-208	ENST00000528773	EGLN2	Q96KS0	407 aa		4.27	□□□□□ -1.73
SUSD1-208	ENST00000528773	DMRTB1	Q96MA1	342 aa		4.27	□□□□□ -1.73
SUSD1-208	ENST00000528773	MS4A4E	Q96PG1	132 aa		4.27	□□□□□ -1.73
SUSD1-208	ENST00000528773	OR5B2	Q96R09	309 aa		4.27	□□□□□ -1.73
SUSD1-208	ENST00000528773	MRPL57	Q9BQC6	102 aa	Known RBP	4.27	□□□□□ -1.73
SUSD1-208	ENST00000528773	C1QTNF5	Q9BXJ0	243 aa		4.27	□□□□□ -1.73
SUSD1-208	ENST00000528773	EBPL	Q9BY08	206 aa		4.27	□□□□□ -1.73
SUSD1-208	ENST00000528773	FUT8	Q9BYC5	575 aa		4.27	□□□□□ -1.73
SUSD1-208	ENST00000528773	HOXD1	Q9GZZ0	328 aa		4.27	□□□□□ -1.73
SUSD1-208	ENST00000528773	QRSL1	Q9H0R6	528 aa	Known RBP	4.27	□□□□□ -1.73
SUSD1-208	ENST00000528773	PIGU	Q9H490	435 aa		4.27	□□□□□ -1.73
SUSD1-208	ENST00000528773	PIF1	Q9H611	641 aa		4.27	□□□□□ -1.73
SUSD1-208	ENST00000528773	ZMAT3	Q9HA38	289 aa	Known RBP	4.27	□□□□□ -1.73
SUSD1-208	ENST00000528773	NTN4	Q9HB63	628 aa		4.27	□□□□□ -1.73
SUSD1-208	ENST00000528773	EQTN	Q9NQ60	294 aa		4.27	□□□□□ -1.73
SUSD1-208	ENST00000528773	SIRT3	Q9NTG7	399 aa	Predicted RBP	4.27	□□□□□ -1.73
SUSD1-208	ENST00000528773	ACER3	Q9NUN7	267 aa		4.27	□□□□□ -1.73
SUSD1-208	ENST00000528773	GPATCH2	Q9NW75	528 aa		4.27	□□□□□ -1.73
SUSD1-208	ENST00000528773	PARPBP	Q9NWS1	579 aa		4.27	□□□□□ -1.73
SUSD1-208	ENST00000528773	TREM2	Q9NZC2	230 aa		4.27	□□□□□ -1.73
SUSD1-208	ENST00000528773	PDP1	Q9P0J1	537 aa	Predicted RBP	4.27	□□□□□ -1.73
SUSD1-208	ENST00000528773	DUSP13	Q9UII6	198 aa		4.27	□□□□□ -1.73
SUSD1-208	ENST00000528773	PPP2R2C	Q9Y2T4	447 aa		4.27	□□□□□ -1.73
SUSD1-208	ENST00000528773	SNX24	Q9Y343	169 aa		4.27	□□□□□ -1.73
SUSD1-208	ENST00000528773	HDGFL3	Q9Y3E1	203 aa		4.27	□□□□□ -1.73
SUSD1-208	ENST00000528773	DTNA	Q9Y4J8	743 aa		4.27	□□□□□ -1.73
SUSD1-208	ENST00000528773	HUWE1	Q7Z6Z7	4374 aa	Known RBP	4.26	□□□□□ -1.73
SUSD1-208	ENST00000528773	PLEC	Q15149	4684 aa	Known RBP	4.26	□□□□□ -1.73
SUSD1-208	ENST00000528773	PPIAL4E	A0A075B759	164 aa		4.26	□□□□□ -1.73
SUSD1-208	ENST00000528773	PPIAL4C	A0A0B4J2A2	164 aa		4.26	□□□□□ -1.73
SUSD1-208	ENST00000528773	IGHV2OR16-5	A0A0B4J2B6	119 aa		4.26	□□□□□ -1.73
SUSD1-208	ENST00000528773	CENPVL1	A0A0U1RR11	272 aa		4.26	□□□□□ -1.73
SUSD1-208	ENST00000528773	DNAJC9-AS1	A6NH13	148 aa		4.26	□□□□□ -1.73
SUSD1-208	ENST00000528773	PPIAL4D	F5H284	164 aa		4.26	□□□□□ -1.73
SUSD1-208	ENST00000528773	ZNF264	O43296	627 aa		4.26	□□□□□ -1.73
SUSD1-208	ENST00000528773	PLPP2	O43688	288 aa		4.26	□□□□□ -1.73
SUSD1-208	ENST00000528773	NCR1	O76036	304 aa		4.26	□□□□□ -1.73
SUSD1-208	ENST00000528773	PRSS23	O95084	383 aa		4.26	□□□□□ -1.73
SUSD1-208	ENST00000528773	HMGN2	P05204	90 aa	Known RBP	4.26	□□□□□ -1.73
SUSD1-208	ENST00000528773	GSN	P06396	782 aa		4.26	□□□□□ -1.73
SUSD1-208	ENST00000528773	ENO1	P06733	434 aa	Known RBP	4.26	□□□□□ -1.73
SUSD1-208	ENST00000528773	GUSB	P08236	651 aa		4.26	□□□□□ -1.73
SUSD1-208	ENST00000528773	ADRA2A	P08913	450 aa		4.26	□□□□□ -1.73
SUSD1-208	ENST00000528773	ALOX5	P09917	674 aa		4.26	□□□□□ -1.73
SUSD1-208	ENST00000528773	PPIAL4F	P0DN26	164 aa		4.26	□□□□□ -1.73
SUSD1-208	ENST00000528773	SAG	P10523	405 aa	Predicted RBP	4.26	□□□□□ -1.73
SUSD1-208	ENST00000528773	IMPDH2	P12268	514 aa		4.26	□□□□□ -1.73
SUSD1-208	ENST00000528773	HPGD	P15428	266 aa		4.26	□□□□□ -1.73
SUSD1-208	ENST00000528773	NPR2	P20594	1047 aa		4.26	□□□□□ -1.73
SUSD1-208	ENST00000528773	GATA3	P23771	443 aa		4.26	□□□□□ -1.73
SUSD1-208	ENST00000528773	FKBP2	P26885	142 aa	Known RBP	4.26	□□□□□ -1.73
SUSD1-208	ENST00000528773	STX2	P32856	288 aa		4.26	□□□□□ -1.73
SUSD1-208	ENST00000528773	APOBEC1	P41238	236 aa	Known RBP	4.26	□□□□□ -1.73
SUSD1-208	ENST00000528773	SLC1A3	P43003	542 aa		4.26	□□□□□ -1.73
SUSD1-208	ENST00000528773	GPR6	P46095	362 aa	Predicted RBP	4.26	□□□□□ -1.73
SUSD1-208	ENST00000528773	SERPINB8	P50452	374 aa		4.26	□□□□□ -1.73
SUSD1-208	ENST00000528773	P2RY4	P51582	365 aa		4.26	□□□□□ -1.73
SUSD1-208	ENST00000528773	FOXA1	P55317	472 aa		4.26	□□□□□ -1.73
SUSD1-208	ENST00000528773	POU6F2	P78424	691 aa	Predicted RBP	4.26	□□□□□ -1.73
SUSD1-208	ENST00000528773	MYBPC1	Q00872	1141 aa		4.26	□□□□□ -1.73
SUSD1-208	ENST00000528773	IL1RL1	Q01638	556 aa		4.26	□□□□□ -1.73
SUSD1-208	ENST00000528773	CBFB	Q13951	182 aa		4.26	□□□□□ -1.73
SUSD1-208	ENST00000528773	ZNF141	Q15928	474 aa		4.26	□□□□□ -1.73
SUSD1-208	ENST00000528773	KLF17	Q5JT82	389 aa	Predicted RBP	4.26	□□□□□ -1.73
SUSD1-208	ENST00000528773	ZNF678	Q5SXM1	525 aa		4.26	□□□□□ -1.73
SUSD1-208	ENST00000528773	C9orf135	Q5VTT2	229 aa		4.26	□□□□□ -1.73
SUSD1-208	ENST00000528773	ACSM5	Q6NUN0	579 aa		4.26	□□□□□ -1.73
SUSD1-208	ENST00000528773	NOXRED1	Q6NXP6	359 aa		4.26	□□□□□ -1.73
SUSD1-208	ENST00000528773	CDC73	Q6P1J9	531 aa		4.26	□□□□□ -1.73
SUSD1-208	ENST00000528773	SHQ1	Q6PI26	577 aa	Known RBP	4.26	□□□□□ -1.73
SUSD1-208	ENST00000528773	GAS2L3	Q86XJ1	694 aa		4.26	□□□□□ -1.73
SUSD1-208	ENST00000528773	ADGRG3	Q86Y34	549 aa		4.26	□□□□□ -1.73
SUSD1-208	ENST00000528773	COX18	Q8N8Q8	333 aa		4.26	□□□□□ -1.73
SUSD1-208	ENST00000528773	POMGNT2	Q8NAT1	580 aa		4.26	□□□□□ -1.73
SUSD1-208	ENST00000528773	SPC24	Q8NBT2	197 aa		4.26	□□□□□ -1.73
SUSD1-208	ENST00000528773	ATP6V1C2	Q8NEY4	427 aa		4.26	□□□□□ -1.73
SUSD1-208	ENST00000528773	OR1K1	Q8NGR3	316 aa		4.26	□□□□□ -1.73
SUSD1-208	ENST00000528773	FBXO30	Q8TB52	745 aa		4.26	□□□□□ -1.73
SUSD1-208	ENST00000528773	METTL6	Q8TCB7	284 aa		4.26	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms