RNA–Protein interactions for RNA: ENST00000528364.1

CLNS1A-210, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLNS1A, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-210ENST00000528364 PEX5LQ8IYB4 626 aa13.58□□□□□ -0.24
CLNS1A-210ENST00000528364 SLC38A5Q8WUX1 472 aa13.58□□□□□ -0.24
CLNS1A-210ENST00000528364 TMEM45BQ96B21 275 aa13.58□□□□□ -0.24
CLNS1A-210ENST00000528364 TNFRSF13CQ96RJ3 184 aa13.58□□□□□ -0.24
CLNS1A-210ENST00000528364 MANSC1Q9H8J5 431 aa13.58□□□□□ -0.24
CLNS1A-210ENST00000528364 ADPRHL2Q9NX46 363 aa13.58□□□□□ -0.24
CLNS1A-210ENST00000528364 MOKQ9UQ07 419 aa13.58□□□□□ -0.24
CLNS1A-210ENST00000528364 AQP7P3A6NL99 342 aa13.57□□□□□ -0.24
CLNS1A-210ENST00000528364 SNNO75324 88 aaPredicted RBP13.57□□□□□ -0.24
CLNS1A-210ENST00000528364 SLC22A3O75751 556 aa13.57□□□□□ -0.24
CLNS1A-210ENST00000528364 GPIP06744 558 aa13.57□□□□□ -0.24
CLNS1A-210ENST00000528364 MPGP29372 298 aa13.57□□□□□ -0.24
CLNS1A-210ENST00000528364 PRPS1P60891 318 aa13.57□□□□□ -0.24
CLNS1A-210ENST00000528364 TXNL4AP83876 142 aaKnown RBP13.57□□□□□ -0.24
CLNS1A-210ENST00000528364 HOXC5Q00444 222 aa13.57□□□□□ -0.24
CLNS1A-210ENST00000528364 MST1LQ2TV78 715 aa13.57□□□□□ -0.24
CLNS1A-210ENST00000528364 TMEM249Q2WGJ8 235 aa13.57□□□□□ -0.24
CLNS1A-210ENST00000528364 ZNF544Q6NX49 715 aa13.57□□□□□ -0.24
CLNS1A-210ENST00000528364 CLEC2AQ6UVW9 174 aa13.57□□□□□ -0.24
CLNS1A-210ENST00000528364 LINGO2Q7L985 606 aa13.57□□□□□ -0.24
CLNS1A-210ENST00000528364 MAVSQ7Z434 540 aa13.57□□□□□ -0.24
CLNS1A-210ENST00000528364 KIRREL3Q8IZU9 778 aa13.57□□□□□ -0.24
CLNS1A-210ENST00000528364 TPT1P8Q9HAU6 139 aa13.57□□□□□ -0.24
CLNS1A-210ENST00000528364 THAP1Q9NVV9 213 aa13.57□□□□□ -0.24
CLNS1A-210ENST00000528364 AMDHD2Q9Y303 409 aa13.57□□□□□ -0.24
CLNS1A-210ENST00000528364 FBN3Q75N90 2809 aa13.57□□□□□ -0.24
CLNS1A-210ENST00000528364 MALRD1Q5VYJ5 2156 aa13.56□□□□□ -0.24
CLNS1A-210ENST00000528364 MXRA5Q9NR99 2828 aa13.56□□□□□ -0.24
CLNS1A-210ENST00000528364 TMEM120BA0PK00 339 aa13.56□□□□□ -0.24
CLNS1A-210ENST00000528364 ELOA3DA6NLF2 546 aaPredicted RBP13.56□□□□□ -0.24
CLNS1A-210ENST00000528364 TRPC5OSA6NMA1 111 aa13.56□□□□□ -0.24
CLNS1A-210ENST00000528364 RNF212BA8MTL3 300 aa13.56□□□□□ -0.24
CLNS1A-210ENST00000528364 NR5A2O00482 541 aa13.56□□□□□ -0.24
CLNS1A-210ENST00000528364 FRS3O43559 492 aa13.56□□□□□ -0.24
CLNS1A-210ENST00000528364 LGI1O95970 557 aa13.56□□□□□ -0.24
CLNS1A-210ENST00000528364 IL6P05231 212 aa13.56□□□□□ -0.24
CLNS1A-210ENST00000528364 BCHEP06276 602 aa13.56□□□□□ -0.24
CLNS1A-210ENST00000528364 NUDT7P0C024 238 aa13.56□□□□□ -0.24
CLNS1A-210ENST00000528364 UQCRBP14927 111 aa13.56□□□□□ -0.24
CLNS1A-210ENST00000528364 APOBEC3AP31941 199 aaPredicted RBP13.56□□□□□ -0.24
CLNS1A-210ENST00000528364 SELENOPP49908 381 aa13.56□□□□□ -0.24
CLNS1A-210ENST00000528364 MAP2K6P52564 334 aa13.56□□□□□ -0.24
CLNS1A-210ENST00000528364 DSTNP60981 165 aa13.56□□□□□ -0.24
CLNS1A-210ENST00000528364 TUBA1BP68363 451 aa13.56□□□□□ -0.24
CLNS1A-210ENST00000528364 TUBA4AP68366 448 aa13.56□□□□□ -0.24
CLNS1A-210ENST00000528364 TGFBR3Q03167 851 aa13.56□□□□□ -0.24
CLNS1A-210ENST00000528364 ELOA3BQ3SY89 546 aa13.56□□□□□ -0.24
CLNS1A-210ENST00000528364 PDCD4Q53EL6 469 aaKnown RBP13.56□□□□□ -0.24
CLNS1A-210ENST00000528364 TMEM225Q6GV28 225 aa13.56□□□□□ -0.24
CLNS1A-210ENST00000528364 WBP2NLQ6ICG8 309 aa13.56□□□□□ -0.24
CLNS1A-210ENST00000528364 TUBA1AQ71U36 451 aa13.56□□□□□ -0.24
CLNS1A-210ENST00000528364 SERPINA11Q86U17 422 aa13.56□□□□□ -0.24
CLNS1A-210ENST00000528364 EPHX4Q8IUS5 362 aa13.56□□□□□ -0.24
CLNS1A-210ENST00000528364 ZNF440Q8IYI8 595 aa13.56□□□□□ -0.24
CLNS1A-210ENST00000528364 KDM8Q8N371 416 aa13.56□□□□□ -0.24
CLNS1A-210ENST00000528364 C17orf78Q8N4C9 275 aa13.56□□□□□ -0.24
CLNS1A-210ENST00000528364 GLB1L3Q8NCI6 653 aaPredicted RBP13.56□□□□□ -0.24
CLNS1A-210ENST00000528364 C1orf162Q8NEQ5 155 aaPredicted RBP13.56□□□□□ -0.24
CLNS1A-210ENST00000528364 ELOA3Q8NG57 546 aa13.56□□□□□ -0.24
CLNS1A-210ENST00000528364 OR9I1Q8NGQ6 314 aa13.56□□□□□ -0.24
CLNS1A-210ENST00000528364 FAM168AQ92567 244 aa13.56□□□□□ -0.24
CLNS1A-210ENST00000528364 VPS33AQ96AX1 596 aa13.56□□□□□ -0.24
CLNS1A-210ENST00000528364 FBXO17Q96EF6 278 aa13.56□□□□□ -0.24
CLNS1A-210ENST00000528364 TMEM19Q96HH6 336 aa13.56□□□□□ -0.24
CLNS1A-210ENST00000528364 OR52B2Q96RD2 323 aa13.56□□□□□ -0.24
CLNS1A-210ENST00000528364 SF3B5Q9BWJ5 86 aaKnown RBP13.56□□□□□ -0.24
CLNS1A-210ENST00000528364 RSPO3Q9BXY4 272 aaPredicted RBP13.56□□□□□ -0.24
CLNS1A-210ENST00000528364 FKRPQ9H9S5 495 aa13.56□□□□□ -0.24
CLNS1A-210ENST00000528364 P2RX2Q9UBL9 471 aa13.56□□□□□ -0.24
CLNS1A-210ENST00000528364 RAB21Q9UL25 225 aa13.56□□□□□ -0.24
CLNS1A-210ENST00000528364 ZNF443Q9Y2A4 671 aaPredicted RBP13.56□□□□□ -0.24
CLNS1A-210ENST00000528364 DSPPQ9NZW4 1301 aa13.56□□□□□ -0.24
CLNS1A-210ENST00000528364 A8MVM7 634 aa13.55□□□□□ -0.24
CLNS1A-210ENST00000528364 H7C417 338 aa13.55□□□□□ -0.24
CLNS1A-210ENST00000528364 UPK3AO75631 287 aa13.55□□□□□ -0.24
CLNS1A-210ENST00000528364 ANP32DO95626 131 aa13.55□□□□□ -0.24
CLNS1A-210ENST00000528364 EFNA4P52798 201 aa13.55□□□□□ -0.24
CLNS1A-210ENST00000528364 DSCR9P59020 149 aa13.55□□□□□ -0.24
CLNS1A-210ENST00000528364 COPZ1P61923 177 aa13.55□□□□□ -0.24
CLNS1A-210ENST00000528364 LOXL1Q08397 574 aaPredicted RBP13.55□□□□□ -0.24
CLNS1A-210ENST00000528364 LRRC74AQ0VAA2 488 aa13.55□□□□□ -0.24
CLNS1A-210ENST00000528364 TBRG1Q3YBR2 411 aa13.55□□□□□ -0.24
CLNS1A-210ENST00000528364 CHRFAM7AQ494W8 412 aa13.55□□□□□ -0.24
CLNS1A-210ENST00000528364 LIN52Q52LA3 116 aa13.55□□□□□ -0.24
CLNS1A-210ENST00000528364 C6orf52Q5T4I8 152 aa13.55□□□□□ -0.24
CLNS1A-210ENST00000528364 C1orf140Q5VVS0 124 aa13.55□□□□□ -0.24
CLNS1A-210ENST00000528364 CREB3L2Q70SY1 520 aa13.55□□□□□ -0.24
CLNS1A-210ENST00000528364 POMGNT2Q8NAT1 580 aa13.55□□□□□ -0.24
CLNS1A-210ENST00000528364 C10orf105Q8TEF2 133 aa13.55□□□□□ -0.24
CLNS1A-210ENST00000528364 BCL2L2Q92843 193 aaPredicted RBP13.55□□□□□ -0.24
CLNS1A-210ENST00000528364 C3orf49Q96BT1 292 aa13.55□□□□□ -0.24
CLNS1A-210ENST00000528364 SLC25A36Q96CQ1 311 aa13.55□□□□□ -0.24
CLNS1A-210ENST00000528364 TAPBPLQ9BX59 468 aa13.55□□□□□ -0.24
CLNS1A-210ENST00000528364 TMEM45AQ9NWC5 275 aa13.55□□□□□ -0.24
CLNS1A-210ENST00000528364 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.55□□□□□ -0.242e-13■■■■■ 32
CLNS1A-210ENST00000528364 A0A096LPE4 126 aa13.54□□□□□ -0.24
CLNS1A-210ENST00000528364 IGHV1-18A0A0C4DH31 117 aa13.54□□□□□ -0.24
CLNS1A-210ENST00000528364 A0A1W2PPZ6 126 aa13.54□□□□□ -0.24
CLNS1A-210ENST00000528364 NPIPB7O75200 414 aa13.54□□□□□ -0.24
CLNS1A-210ENST00000528364 KRT33AO76009 404 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms