RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 GTPBP3Q969Y2 492 aaKnown RBP8.49□□□□□ -1.05
CHD7-208ENST00000528280 MUS81Q96NY9 551 aa8.49□□□□□ -1.05
CHD7-208ENST00000528280 BDH2Q9BUT1 245 aa8.49□□□□□ -1.05
CHD7-208ENST00000528280 TMEM27Q9HBJ8 222 aa8.49□□□□□ -1.05
CHD7-208ENST00000528280 SLC52A3Q9NQ40 469 aa8.49□□□□□ -1.05
CHD7-208ENST00000528280 FAIMQ9NVQ4 179 aa8.49□□□□□ -1.05
CHD7-208ENST00000528280 TAS2R16Q9NYV7 291 aa8.49□□□□□ -1.05
CHD7-208ENST00000528280 SLC25A37Q9NYZ2 338 aa8.49□□□□□ -1.05
CHD7-208ENST00000528280 VAPAQ9P0L0 249 aa8.49□□□□□ -1.05
CHD7-208ENST00000528280 PRSS50Q9UI38 385 aa8.49□□□□□ -1.05
CHD7-208ENST00000528280 DCTN4Q9UJW0 460 aa8.49□□□□□ -1.05
CHD7-208ENST00000528280 RASD1Q9Y272 281 aa8.49□□□□□ -1.05
CHD7-208ENST00000528280 OR5H1A6NKK0 313 aa8.48□□□□□ -1.05
CHD7-208ENST00000528280 AQP7P3A6NL99 342 aa8.48□□□□□ -1.05
CHD7-208ENST00000528280 ELOA3DA6NLF2 546 aaPredicted RBP8.48□□□□□ -1.05
CHD7-208ENST00000528280 LYZL6O75951 148 aa8.48□□□□□ -1.05
CHD7-208ENST00000528280 AHSA1O95433 338 aa8.48□□□□□ -1.05
CHD7-208ENST00000528280 C8BP07358 591 aa8.48□□□□□ -1.05
CHD7-208ENST00000528280 NUDT7P0C024 238 aa8.48□□□□□ -1.05
CHD7-208ENST00000528280 TROVE2P10155 538 aaKnown RBP eCLIP8.48□□□□□ -1.05
CHD7-208ENST00000528280 IMPDH2P12268 514 aa8.48□□□□□ -1.05
CHD7-208ENST00000528280 HOXB9P17482 250 aaPredicted RBP8.48□□□□□ -1.05
CHD7-208ENST00000528280 IGHV1-2P23083 117 aa8.48□□□□□ -1.05
CHD7-208ENST00000528280 PTAFRP25105 342 aa8.48□□□□□ -1.05
CHD7-208ENST00000528280 GTF2E2P29084 291 aaKnown RBP8.48□□□□□ -1.05
CHD7-208ENST00000528280 ADSLP30566 484 aaPredicted RBP8.48□□□□□ -1.05
CHD7-208ENST00000528280 PLAURQ03405 335 aa8.48□□□□□ -1.05
CHD7-208ENST00000528280 FOXD4Q12950 439 aaPredicted RBP8.48□□□□□ -1.05
CHD7-208ENST00000528280 CYLC2Q14093 348 aaPredicted RBP8.48□□□□□ -1.05
CHD7-208ENST00000528280 SCARB2Q14108 478 aa8.48□□□□□ -1.05
CHD7-208ENST00000528280 MFSD13AQ14CX5 517 aa8.48□□□□□ -1.05
CHD7-208ENST00000528280 OR7A5Q15622 319 aa8.48□□□□□ -1.05
CHD7-208ENST00000528280 ELOA3BQ3SY89 546 aa8.48□□□□□ -1.05
CHD7-208ENST00000528280 RPS26P11Q5JNZ5 115 aaPredicted RBP8.48□□□□□ -1.05
CHD7-208ENST00000528280 C1orf140Q5VVS0 124 aa8.48□□□□□ -1.05
CHD7-208ENST00000528280 FAM91A1Q658Y4 838 aa8.48□□□□□ -1.05
CHD7-208ENST00000528280 ALKBH2Q6NS38 261 aa8.48□□□□□ -1.05
CHD7-208ENST00000528280 ULK3Q6PHR2 472 aa8.48□□□□□ -1.05
CHD7-208ENST00000528280 TMEM108Q6UXF1 575 aa8.48□□□□□ -1.05
CHD7-208ENST00000528280 AAED1Q7RTV5 226 aa8.48□□□□□ -1.05
CHD7-208ENST00000528280 C17orf78Q8N4C9 275 aa8.48□□□□□ -1.05
CHD7-208ENST00000528280 C11orf65Q8NCR3 313 aa8.48□□□□□ -1.05
CHD7-208ENST00000528280 HIPK4Q8NE63 616 aa8.48□□□□□ -1.05
CHD7-208ENST00000528280 C1orf162Q8NEQ5 155 aaPredicted RBP8.48□□□□□ -1.05
CHD7-208ENST00000528280 ELOA3Q8NG57 546 aa8.48□□□□□ -1.05
CHD7-208ENST00000528280 OR52E4Q8NGH9 312 aa8.48□□□□□ -1.05
CHD7-208ENST00000528280 NFKBIDQ8NI38 313 aa8.48□□□□□ -1.05
CHD7-208ENST00000528280 AKAP1Q92667 903 aaKnown RBP eCLIP8.48□□□□□ -1.05
CHD7-208ENST00000528280 MAL2Q969L2 176 aa8.48□□□□□ -1.05
CHD7-208ENST00000528280 TMEM45BQ96B21 275 aa8.48□□□□□ -1.05
CHD7-208ENST00000528280 SLC47A1Q96FL8 570 aa8.48□□□□□ -1.05
CHD7-208ENST00000528280 TRMT61AQ96FX7 289 aaKnown RBP8.48□□□□□ -1.05
CHD7-208ENST00000528280 HS3ST6Q96QI5 342 aa8.48□□□□□ -1.05
CHD7-208ENST00000528280 GSX2Q9BZM3 304 aa8.48□□□□□ -1.05
CHD7-208ENST00000528280 MOV10Q9HCE1 1003 aaKnown RBP8.48□□□□□ -1.05
CHD7-208ENST00000528280 NPHS2Q9NP85 383 aa8.48□□□□□ -1.05
CHD7-208ENST00000528280 SLAMF8Q9P0V8 285 aa8.48□□□□□ -1.05
CHD7-208ENST00000528280 MALT1Q9UDY8 824 aa8.48□□□□□ -1.05
CHD7-208ENST00000528280 ANGPT4Q9Y264 503 aa8.48□□□□□ -1.05
CHD7-208ENST00000528280 MAGED1Q9Y5V3 778 aaPredicted RBP8.48□□□□□ -1.05
CHD7-208ENST00000528280 FLVCR1Q9Y5Y0 555 aa8.48□□□□□ -1.05
CHD7-208ENST00000528280 TRBV5-3A0A0A0MS03 114 aa8.47□□□□□ -1.05
CHD7-208ENST00000528280 A0A0G2JND7 137 aa8.47□□□□□ -1.05
CHD7-208ENST00000528280 ERICH4A6NGS2 130 aa8.47□□□□□ -1.05
CHD7-208ENST00000528280 NPIPB7O75200 414 aa8.47□□□□□ -1.05
CHD7-208ENST00000528280 KRT33AO76009 404 aa8.47□□□□□ -1.05
CHD7-208ENST00000528280 AKR7A3O95154 331 aa8.47□□□□□ -1.05
CHD7-208ENST00000528280 WNT11O96014 354 aa8.47□□□□□ -1.05
CHD7-208ENST00000528280 PRG2P13727 222 aa8.47□□□□□ -1.05
CHD7-208ENST00000528280 HOXB1P14653 301 aaPredicted RBP8.47□□□□□ -1.05
CHD7-208ENST00000528280 MPGP29372 298 aa8.47□□□□□ -1.05
CHD7-208ENST00000528280 GYS2P54840 703 aa8.47□□□□□ -1.05
CHD7-208ENST00000528280 NCALDP61601 193 aa8.47□□□□□ -1.05
CHD7-208ENST00000528280 LTBQ06643 244 aa8.47□□□□□ -1.05
CHD7-208ENST00000528280 FAPQ12884 760 aa8.47□□□□□ -1.05
CHD7-208ENST00000528280 TSC22D1Q15714 1073 aa8.47□□□□□ -1.05
CHD7-208ENST00000528280 STK11Q15831 433 aa8.47□□□□□ -1.05
CHD7-208ENST00000528280 ETFDHQ16134 617 aa8.47□□□□□ -1.05
CHD7-208ENST00000528280 INTS11Q5TA45 600 aaKnown RBP8.47□□□□□ -1.05
CHD7-208ENST00000528280 C6orf89Q6UWU4 347 aa8.47□□□□□ -1.05
CHD7-208ENST00000528280 CASP12Q6UXS9 341 aa8.47□□□□□ -1.05
CHD7-208ENST00000528280 DLEU7Q6UYE1 221 aa8.47□□□□□ -1.05
CHD7-208ENST00000528280 ATG4DQ86TL0 474 aaPredicted RBP8.47□□□□□ -1.05
CHD7-208ENST00000528280 SERPINA11Q86U17 422 aa8.47□□□□□ -1.05
CHD7-208ENST00000528280 BIVMQ86UB2 503 aa8.47□□□□□ -1.05
CHD7-208ENST00000528280 RANBP3LQ86VV4 465 aaPredicted RBP8.47□□□□□ -1.05
CHD7-208ENST00000528280 ARMC8Q8IUR7 673 aa8.47□□□□□ -1.05
CHD7-208ENST00000528280 MSRB3Q8IXL7 192 aa8.47□□□□□ -1.05
CHD7-208ENST00000528280 TMEM99Q8N816 258 aa8.47□□□□□ -1.05
CHD7-208ENST00000528280 OR9K2Q8NGE7 335 aa8.47□□□□□ -1.05
CHD7-208ENST00000528280 OR6S1Q8NH40 331 aa8.47□□□□□ -1.05
CHD7-208ENST00000528280 RASSF5Q8WWW0 418 aa8.47□□□□□ -1.05
CHD7-208ENST00000528280 SLC38A4Q969I6 547 aa8.47□□□□□ -1.05
CHD7-208ENST00000528280 FBXW5Q969U6 566 aa8.47□□□□□ -1.05
CHD7-208ENST00000528280 C3orf49Q96BT1 292 aa8.47□□□□□ -1.05
CHD7-208ENST00000528280 BOD1Q96IK1 185 aa8.47□□□□□ -1.05
CHD7-208ENST00000528280 C18orf12Q96KH6 178 aa8.47□□□□□ -1.05
CHD7-208ENST00000528280 ANKRD27Q96NW4 1050 aa8.47□□□□□ -1.05
CHD7-208ENST00000528280 ZNF317Q96PQ6 595 aaPredicted RBP8.47□□□□□ -1.05
CHD7-208ENST00000528280 EPYCQ99645 322 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms