RNA–Protein interactions for RNA: ENST00000528001.1

CNKSR1-211, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 4

Gene CNKSR1, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-211ENST00000528001 NPDC1Q9NQX5 325 aaPredicted RBP11.65□□□□□ -0.54
CNKSR1-211ENST00000528001 ACTR3BQ9P1U1 418 aa11.65□□□□□ -0.54
CNKSR1-211ENST00000528001 GMPR2Q9P2T1 348 aaKnown RBP11.65□□□□□ -0.54
CNKSR1-211ENST00000528001 PROCRQ9UNN8 238 aa11.65□□□□□ -0.54
CNKSR1-211ENST00000528001 RASD1Q9Y272 281 aa11.65□□□□□ -0.54
CNKSR1-211ENST00000528001 PTPN13Q12923 2485 aa11.65□□□□□ -0.54
CNKSR1-211ENST00000528001 NKX2-6A6NCS4 301 aa11.64□□□□□ -0.55
CNKSR1-211ENST00000528001 CPSF4LA6NMK7 179 aaKnown RBP11.64□□□□□ -0.55
CNKSR1-211ENST00000528001 ATP5HO75947 161 aa11.64□□□□□ -0.55
CNKSR1-211ENST00000528001 UBOX5O94941 541 aa11.64□□□□□ -0.55
CNKSR1-211ENST00000528001 ZNF682O95780 498 aa11.64□□□□□ -0.55
CNKSR1-211ENST00000528001 THY1P04216 161 aa11.64□□□□□ -0.55
CNKSR1-211ENST00000528001 RASSF2P50749 326 aa11.64□□□□□ -0.55
CNKSR1-211ENST00000528001 P2RY4P51582 365 aa11.64□□□□□ -0.55
CNKSR1-211ENST00000528001 ST3GAL3Q11203 375 aa11.64□□□□□ -0.55
CNKSR1-211ENST00000528001 SLC17A1Q14916 467 aa11.64□□□□□ -0.55
CNKSR1-211ENST00000528001 SP5Q6BEB4 398 aaPredicted RBP11.64□□□□□ -0.55
CNKSR1-211ENST00000528001 PPP4R4Q6NUP7 873 aa11.64□□□□□ -0.55
CNKSR1-211ENST00000528001 VWA1Q6PCB0 445 aa11.64□□□□□ -0.55
CNKSR1-211ENST00000528001 RINLQ6ZS11 566 aa11.64□□□□□ -0.55
CNKSR1-211ENST00000528001 BEND4Q6ZU67 534 aa11.64□□□□□ -0.55
CNKSR1-211ENST00000528001 BTLAQ7Z6A9 289 aa11.64□□□□□ -0.55
CNKSR1-211ENST00000528001 STK32CQ86UX6 486 aa11.64□□□□□ -0.55
CNKSR1-211ENST00000528001 DMRTC2Q8IXT2 367 aaPredicted RBP11.64□□□□□ -0.55
CNKSR1-211ENST00000528001 OFCC1Q8IZS5 231 aa11.64□□□□□ -0.55
CNKSR1-211ENST00000528001 KTI12Q96EK9 354 aaPredicted RBP11.64□□□□□ -0.55
CNKSR1-211ENST00000528001 SLC41A3Q96GZ6 507 aa11.64□□□□□ -0.55
CNKSR1-211ENST00000528001 TPD52L3Q96J77 140 aa11.64□□□□□ -0.55
CNKSR1-211ENST00000528001 HSH2DQ96JZ2 352 aa11.64□□□□□ -0.55
CNKSR1-211ENST00000528001 NSMCE2Q96MF7 247 aa11.64□□□□□ -0.55
CNKSR1-211ENST00000528001 PRR14Q9BWN1 585 aa11.64□□□□□ -0.55
CNKSR1-211ENST00000528001 OR10A4Q9H209 315 aa11.64□□□□□ -0.55
CNKSR1-211ENST00000528001 ANKRD19PQ9H560 264 aa11.64□□□□□ -0.55
CNKSR1-211ENST00000528001 EGFL7Q9UHF1 273 aa11.64□□□□□ -0.55
CNKSR1-211ENST00000528001 RIMS3Q9UJD0 308 aa11.64□□□□□ -0.55
CNKSR1-211ENST00000528001 SLC7A7Q9UM01 511 aa11.64□□□□□ -0.55
CNKSR1-211ENST00000528001 B3GALT5Q9Y2C3 310 aa11.64□□□□□ -0.55
CNKSR1-211ENST00000528001 EEF1E1-BLOC1S5C9J1V9 151 aa11.63□□□□□ -0.55
CNKSR1-211ENST00000528001 ARPC2O15144 300 aa11.63□□□□□ -0.55
CNKSR1-211ENST00000528001 EEF1E1O43324 174 aaKnown RBP11.63□□□□□ -0.55
CNKSR1-211ENST00000528001 HNRNPRO43390 633 aaKnown RBP11.63□□□□□ -0.55
CNKSR1-211ENST00000528001 GOSR1O95249 250 aa11.63□□□□□ -0.55
CNKSR1-211ENST00000528001 ITGA2P17301 1181 aa11.63□□□□□ -0.55
CNKSR1-211ENST00000528001 HOXB6P17509 224 aaKnown RBP11.63□□□□□ -0.55
CNKSR1-211ENST00000528001 GRNP28799 593 aaKnown RBP11.63□□□□□ -0.55
CNKSR1-211ENST00000528001 OR1E2P47887 323 aa11.63□□□□□ -0.55
CNKSR1-211ENST00000528001 TAS2R41P59536 307 aa11.63□□□□□ -0.55
CNKSR1-211ENST00000528001 BNIP1Q12981 228 aa11.63□□□□□ -0.55
CNKSR1-211ENST00000528001 TRIM25Q14258 630 aaKnown RBP11.63□□□□□ -0.55
CNKSR1-211ENST00000528001 OR7A5Q15622 319 aa11.63□□□□□ -0.55
CNKSR1-211ENST00000528001 OTUD3Q5T2D3 398 aaPredicted RBP11.63□□□□□ -0.55
CNKSR1-211ENST00000528001 TTC33Q6PID6 262 aaPredicted RBP11.63□□□□□ -0.55
CNKSR1-211ENST00000528001 DEF8Q6ZN54 512 aa11.63□□□□□ -0.55
CNKSR1-211ENST00000528001 FKBP9P1Q75LS8 142 aa11.63□□□□□ -0.55
CNKSR1-211ENST00000528001 GDF7Q7Z4P5 450 aa11.63□□□□□ -0.55
CNKSR1-211ENST00000528001 VTCN1Q7Z7D3 282 aa11.63□□□□□ -0.55
CNKSR1-211ENST00000528001 GALNT5Q7Z7M9 940 aa11.63□□□□□ -0.55
CNKSR1-211ENST00000528001 TSPYL5Q86VY4 417 aaPredicted RBP11.63□□□□□ -0.55
CNKSR1-211ENST00000528001 TUSC5Q8IXB3 177 aa11.63□□□□□ -0.55
CNKSR1-211ENST00000528001 RNF148Q8N7C7 305 aa11.63□□□□□ -0.55
CNKSR1-211ENST00000528001 TAAR8Q969N4 342 aa11.63□□□□□ -0.55
CNKSR1-211ENST00000528001 TMEM45BQ96B21 275 aa11.63□□□□□ -0.55
CNKSR1-211ENST00000528001 ASB9Q96DX5 294 aa11.63□□□□□ -0.55
CNKSR1-211ENST00000528001 USB1Q9BQ65 265 aaKnown RBP11.63□□□□□ -0.55
CNKSR1-211ENST00000528001 PRSS27Q9BQR3 290 aa11.63□□□□□ -0.55
CNKSR1-211ENST00000528001 RBM24Q9BX46 236 aaKnown RBP11.63□□□□□ -0.55
CNKSR1-211ENST00000528001 AMBRA1Q9C0C7 1298 aa11.63□□□□□ -0.55
CNKSR1-211ENST00000528001 KLHL4Q9C0H6 718 aa11.63□□□□□ -0.55
CNKSR1-211ENST00000528001 PARPBPQ9NWS1 579 aa11.63□□□□□ -0.55
CNKSR1-211ENST00000528001 A4GNTQ9UNA3 340 aa11.63□□□□□ -0.55
CNKSR1-211ENST00000528001 MED12LQ86YW9 2145 aa11.62□□□□□ -0.55
CNKSR1-211ENST00000528001 IGHV3-15A0A0B4J1V0 119 aa11.62□□□□□ -0.55
CNKSR1-211ENST00000528001 C19orf84I3L1E1 186 aa11.62□□□□□ -0.55
CNKSR1-211ENST00000528001 PRSS23O95084 383 aa11.62□□□□□ -0.55
CNKSR1-211ENST00000528001 BGLAPP02818 100 aa11.62□□□□□ -0.55
CNKSR1-211ENST00000528001 SEMG1P04279 462 aa11.62□□□□□ -0.55
CNKSR1-211ENST00000528001 NCK1P16333 377 aa11.62□□□□□ -0.55
CNKSR1-211ENST00000528001 TCN1P20061 433 aaPredicted RBP11.62□□□□□ -0.55
CNKSR1-211ENST00000528001 GTF2E2P29084 291 aaKnown RBP11.62□□□□□ -0.55
CNKSR1-211ENST00000528001 CD79BP40259 229 aa11.62□□□□□ -0.55
CNKSR1-211ENST00000528001 RPS5P46782 204 aaKnown RBP11.62□□□□□ -0.55
CNKSR1-211ENST00000528001 OR3A2P47893 321 aa11.62□□□□□ -0.55
CNKSR1-211ENST00000528001 TRAP1Q12931 704 aaKnown RBP11.62□□□□□ -0.55
CNKSR1-211ENST00000528001 C1QTNF12Q5T7M4 302 aa11.62□□□□□ -0.55
CNKSR1-211ENST00000528001 LCN8Q6JVE9 175 aa11.62□□□□□ -0.55
CNKSR1-211ENST00000528001 TFAP2EQ6VUC0 442 aa11.62□□□□□ -0.55
CNKSR1-211ENST00000528001 WDR88Q6ZMY6 472 aa11.62□□□□□ -0.55
CNKSR1-211ENST00000528001 H1FNTQ75WM6 255 aaPredicted RBP11.62□□□□□ -0.55
CNKSR1-211ENST00000528001 CYP4Z1Q86W10 505 aa11.62□□□□□ -0.55
CNKSR1-211ENST00000528001 RNF113BQ8IZP6 322 aaKnown RBP11.62□□□□□ -0.55
CNKSR1-211ENST00000528001 TMEM99Q8N816 258 aa11.62□□□□□ -0.55
CNKSR1-211ENST00000528001 FAM156AQ8NDB6 213 aa11.62□□□□□ -0.55
CNKSR1-211ENST00000528001 LIPHQ8WWY8 451 aa11.62□□□□□ -0.55
CNKSR1-211ENST00000528001 SLC7A6OSQ96CW6 309 aaPredicted RBP11.62□□□□□ -0.55
CNKSR1-211ENST00000528001 PYURFQ96I23 114 aa11.62□□□□□ -0.55
CNKSR1-211ENST00000528001 C7orf34Q96L11 122 aa11.62□□□□□ -0.55
CNKSR1-211ENST00000528001 BTBD10Q9BSF8 475 aa11.62□□□□□ -0.55
CNKSR1-211ENST00000528001 FKRPQ9H9S5 495 aa11.62□□□□□ -0.55
CNKSR1-211ENST00000528001 MRPL39Q9NYK5 338 aaKnown RBP11.62□□□□□ -0.55
CNKSR1-211ENST00000528001 KCNN3Q9UGI6 736 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms