RNA–Protein interactions for RNA: ENST00000527962.5

CTTN-212, Transcript of cortactin, humanhuman

TSL 2

Gene CTTN, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-212ENST00000527962 WDR60Q8WVS4 1066 aa13.74□□□□□ -0.21
CTTN-212ENST00000527962 CNOT9Q92600 299 aaKnown RBP13.74□□□□□ -0.21
CTTN-212ENST00000527962 SLC35F4A4IF30 521 aa13.73□□□□□ -0.21
CTTN-212ENST00000527962 AQP7P3A6NL99 342 aa13.73□□□□□ -0.21
CTTN-212ENST00000527962 CLDN24A6NM45 220 aa13.73□□□□□ -0.21
CTTN-212ENST00000527962 DBIP07108 87 aaKnown RBP13.73□□□□□ -0.21
CTTN-212ENST00000527962 OR4A8P0C604 315 aa13.73□□□□□ -0.21
CTTN-212ENST00000527962 HOXB1P14653 301 aaPredicted RBP13.73□□□□□ -0.21
CTTN-212ENST00000527962 S100A3P33764 101 aa13.73□□□□□ -0.21
CTTN-212ENST00000527962 PPOXP50336 477 aa13.73□□□□□ -0.21
CTTN-212ENST00000527962 OR7A5Q15622 319 aa13.73□□□□□ -0.21
CTTN-212ENST00000527962 EFNB3Q15768 340 aa13.73□□□□□ -0.21
CTTN-212ENST00000527962 PDCD2Q16342 344 aaPredicted RBP13.73□□□□□ -0.21
CTTN-212ENST00000527962 C3orf36Q3SXR2 165 aa13.73□□□□□ -0.21
CTTN-212ENST00000527962 TBRG1Q3YBR2 411 aa13.73□□□□□ -0.21
CTTN-212ENST00000527962 LRRC74BQ6ZQY2 392 aa13.73□□□□□ -0.21
CTTN-212ENST00000527962 IL17RELQ6ZVW7 336 aa13.73□□□□□ -0.21
CTTN-212ENST00000527962 PEX5LQ8IYB4 626 aa13.73□□□□□ -0.21
CTTN-212ENST00000527962 RFLNBQ8N5W9 214 aa13.73□□□□□ -0.21
CTTN-212ENST00000527962 TMEM99Q8N816 258 aa13.73□□□□□ -0.21
CTTN-212ENST00000527962 AKTIPQ9H8T0 292 aa13.73□□□□□ -0.21
CTTN-212ENST00000527962 CACYBPQ9HB71 228 aaKnown RBP13.73□□□□□ -0.21
CTTN-212ENST00000527962 PCDHB14Q9Y5E9 798 aa13.73□□□□□ -0.21
CTTN-212ENST00000527962 IGHV1-18A0A0C4DH31 117 aa13.72□□□□□ -0.21
CTTN-212ENST00000527962 IGHV4-61A0A0C4DH41 118 aa13.72□□□□□ -0.21
CTTN-212ENST00000527962 LIPT2A6NK58 231 aa13.72□□□□□ -0.21
CTTN-212ENST00000527962 HMGN4O00479 90 aa13.72□□□□□ -0.21
CTTN-212ENST00000527962 AP3D1O14617 1153 aa13.72□□□□□ -0.21
CTTN-212ENST00000527962 TCF21O43680 179 aa13.72□□□□□ -0.21
CTTN-212ENST00000527962 AKR7A3O95154 331 aa13.72□□□□□ -0.21
CTTN-212ENST00000527962 NR2F1P10589 423 aa13.72□□□□□ -0.21
CTTN-212ENST00000527962 PCMT1P22061 227 aa13.72□□□□□ -0.21
CTTN-212ENST00000527962 SRP14P37108 136 aaKnown RBP13.72□□□□□ -0.21
CTTN-212ENST00000527962 IDH3GP51553 393 aaPredicted RBP13.72□□□□□ -0.21
CTTN-212ENST00000527962 CHN2P52757 468 aa13.72□□□□□ -0.21
CTTN-212ENST00000527962 SH3BGRP55822 239 aaPredicted RBP13.72□□□□□ -0.21
CTTN-212ENST00000527962 FUT5Q11128 374 aa13.72□□□□□ -0.21
CTTN-212ENST00000527962 CASP8Q14790 479 aa13.72□□□□□ -0.21
CTTN-212ENST00000527962 ZSWIM7Q19AV6 140 aa13.72□□□□□ -0.21
CTTN-212ENST00000527962 HMGN2P46Q86SG4 172 aa13.72□□□□□ -0.21
CTTN-212ENST00000527962 RNF130Q86XS8 419 aa13.72□□□□□ -0.21
CTTN-212ENST00000527962 LRRC34Q8IZ02 419 aa13.72□□□□□ -0.21
CTTN-212ENST00000527962 ANKS4BQ8N8V4 417 aa13.72□□□□□ -0.21
CTTN-212ENST00000527962 ZIC4Q8N9L1 334 aa13.72□□□□□ -0.21
CTTN-212ENST00000527962 OR1K1Q8NGR3 316 aa13.72□□□□□ -0.21
CTTN-212ENST00000527962 NEU4Q8WWR8 484 aaPredicted RBP13.72□□□□□ -0.21
CTTN-212ENST00000527962 HPS1Q92902 700 aa13.72□□□□□ -0.21
CTTN-212ENST00000527962 PPP1R36Q96LQ0 422 aa13.72□□□□□ -0.21
CTTN-212ENST00000527962 ANKRD27Q96NW4 1050 aa13.72□□□□□ -0.21
CTTN-212ENST00000527962 ZNF385AQ96PM9 386 aaKnown RBP13.72□□□□□ -0.21
CTTN-212ENST00000527962 PANX1Q96RD7 426 aa13.72□□□□□ -0.21
CTTN-212ENST00000527962 ROPN1BQ9BZX4 212 aaPredicted RBP13.72□□□□□ -0.21
CTTN-212ENST00000527962 BPESC1Q9GZL8 116 aa13.72□□□□□ -0.21
CTTN-212ENST00000527962 ADAM19Q9H013 955 aa13.72□□□□□ -0.21
CTTN-212ENST00000527962 ARMC7Q9H6L4 198 aa13.72□□□□□ -0.21
CTTN-212ENST00000527962 ROPN1Q9HAT0 212 aaPredicted RBP13.72□□□□□ -0.21
CTTN-212ENST00000527962 ADPRHL2Q9NX46 363 aa13.72□□□□□ -0.21
CTTN-212ENST00000527962 LGALS13Q9UHV8 139 aa13.72□□□□□ -0.21
CTTN-212ENST00000527962 BTNL2Q9UIR0 455 aa13.72□□□□□ -0.21
CTTN-212ENST00000527962 NUP214P35658 2090 aaPredicted RBP13.71□□□□□ -0.21
CTTN-212ENST00000527962 A0A096LPI6 279 aa13.71□□□□□ -0.21
CTTN-212ENST00000527962 ARPC4-TTLL3A0A0A6YYG9 625 aa13.71□□□□□ -0.21
CTTN-212ENST00000527962 A8MVM7 634 aa13.71□□□□□ -0.21
CTTN-212ENST00000527962 E9PBE3 544 aa13.71□□□□□ -0.21
CTTN-212ENST00000527962 ARRB2P32121 409 aa13.71□□□□□ -0.21
CTTN-212ENST00000527962 EPS8Q12929 822 aa13.71□□□□□ -0.21
CTTN-212ENST00000527962 SYPL1Q16563 259 aa13.71□□□□□ -0.21
CTTN-212ENST00000527962 CR1LQ2VPA4 569 aa13.71□□□□□ -0.21
CTTN-212ENST00000527962 FAM174BQ3ZCQ3 159 aa13.71□□□□□ -0.21
CTTN-212ENST00000527962 WBP2NLQ6ICG8 309 aa13.71□□□□□ -0.21
CTTN-212ENST00000527962 ANKRD16Q6P6B7 361 aa13.71□□□□□ -0.21
CTTN-212ENST00000527962 VHLLQ6RSH7 139 aa13.71□□□□□ -0.21
CTTN-212ENST00000527962 FAM169BQ8N8A8 192 aa13.71□□□□□ -0.21
CTTN-212ENST00000527962 ANKFN1Q8N957 763 aa13.71□□□□□ -0.21
CTTN-212ENST00000527962 MAGEE2Q8TD90 523 aaPredicted RBP13.71□□□□□ -0.21
CTTN-212ENST00000527962 CCDC115Q96NT0 180 aa13.71□□□□□ -0.21
CTTN-212ENST00000527962 SLC38A1Q9H2H9 487 aa13.71□□□□□ -0.21
CTTN-212ENST00000527962 PLK3Q9H4B4 646 aa13.71□□□□□ -0.21
CTTN-212ENST00000527962 CALML5Q9NZT1 146 aa13.71□□□□□ -0.21
CTTN-212ENST00000527962 RASD1Q9Y272 281 aa13.71□□□□□ -0.21
CTTN-212ENST00000527962 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.71□□□□□ -0.21
CTTN-212ENST00000527962 ZC3H12DA2A288 527 aaKnown RBP13.7□□□□□ -0.22
CTTN-212ENST00000527962 CCDC154A6NI56 674 aa13.7□□□□□ -0.22
CTTN-212ENST00000527962 KRT75O95678 551 aa13.7□□□□□ -0.22
CTTN-212ENST00000527962 LGI1O95970 557 aa13.7□□□□□ -0.22
CTTN-212ENST00000527962 SERPINE1P05121 402 aa13.7□□□□□ -0.22
CTTN-212ENST00000527962 DAOP14920 347 aa13.7□□□□□ -0.22
CTTN-212ENST00000527962 LBPP18428 481 aa13.7□□□□□ -0.22
CTTN-212ENST00000527962 RPL14P50914 215 aaKnown RBP13.7□□□□□ -0.22
CTTN-212ENST00000527962 NAAAQ02083 359 aa13.7□□□□□ -0.22
CTTN-212ENST00000527962 ADIPOQQ15848 244 aa13.7□□□□□ -0.22
CTTN-212ENST00000527962 LIN52Q52LA3 116 aa13.7□□□□□ -0.22
CTTN-212ENST00000527962 SPANXN4Q5MJ08 99 aa13.7□□□□□ -0.22
CTTN-212ENST00000527962 MRPL2Q5T653 305 aaKnown RBP13.7□□□□□ -0.22
CTTN-212ENST00000527962 PRAMEF8Q5VWM4 474 aa13.7□□□□□ -0.22
CTTN-212ENST00000527962 PRAMEF7Q5VXH5 474 aa13.7□□□□□ -0.22
CTTN-212ENST00000527962 ZNF621Q6ZSS3 439 aa13.7□□□□□ -0.22
CTTN-212ENST00000527962 CREB3L2Q70SY1 520 aa13.7□□□□□ -0.22
CTTN-212ENST00000527962 CADM2Q8N3J6 435 aa13.7□□□□□ -0.22
CTTN-212ENST00000527962 LINC01356Q8N9X3 169 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms