RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 TMEM239Q8WW34 195 aa9.61□□□□□ -0.87
NEDD8-205ENST00000527046 DDIT4LQ96D03 193 aa9.61□□□□□ -0.87
NEDD8-205ENST00000527046 B3GAT1Q9P2W7 334 aa9.61□□□□□ -0.87
NEDD8-205ENST00000527046 Q9UFV3 132 aa9.61□□□□□ -0.87
NEDD8-205ENST00000527046 ZNF175Q9Y473 711 aa9.61□□□□□ -0.87
NEDD8-205ENST00000527046 TESMINQ9Y4I5 508 aa9.61□□□□□ -0.87
NEDD8-205ENST00000527046 LYVE1Q9Y5Y7 322 aa9.61□□□□□ -0.87
NEDD8-205ENST00000527046 ALPK2Q86TB3 2170 aa9.6□□□□□ -0.87
NEDD8-205ENST00000527046 INTS1Q8N201 2190 aaKnown RBP9.6□□□□□ -0.87
NEDD8-205ENST00000527046 TRAV36DV7A0A075B6V5 113 aa9.6□□□□□ -0.87
NEDD8-205ENST00000527046 A0A1B0GUH1 482 aa9.6□□□□□ -0.87
NEDD8-205ENST00000527046 SH3PXD2BA1X283 911 aa9.6□□□□□ -0.87
NEDD8-205ENST00000527046 SLC22A20A6NK97 555 aa9.6□□□□□ -0.87
NEDD8-205ENST00000527046 GJE1A6NN92 205 aa9.6□□□□□ -0.87
NEDD8-205ENST00000527046 CYTIPO60759 359 aa9.6□□□□□ -0.87
NEDD8-205ENST00000527046 FKBP6O75344 327 aa9.6□□□□□ -0.87
NEDD8-205ENST00000527046 LDLRP01130 860 aa9.6□□□□□ -0.87
NEDD8-205ENST00000527046 CGAP01215 116 aa9.6□□□□□ -0.87
NEDD8-205ENST00000527046 IGF2P01344 180 aa9.6□□□□□ -0.87
NEDD8-205ENST00000527046 GPIP06744 558 aa9.6□□□□□ -0.87
NEDD8-205ENST00000527046 H1F0P07305 194 aaKnown RBP9.6□□□□□ -0.87
NEDD8-205ENST00000527046 ASAH2BP0C7U1 165 aa9.6□□□□□ -0.87
NEDD8-205ENST00000527046 CBLP22681 906 aa9.6□□□□□ -0.87
NEDD8-205ENST00000527046 IDUAP35475 653 aa9.6□□□□□ -0.87
NEDD8-205ENST00000527046 IST1P53990 364 aa9.6□□□□□ -0.87
NEDD8-205ENST00000527046 CTBP2P56545 445 aa9.6□□□□□ -0.87
NEDD8-205ENST00000527046 OR2B6P58173 313 aa9.6□□□□□ -0.87
NEDD8-205ENST00000527046 RPS3AP61247 264 aaKnown RBP9.6□□□□□ -0.87
NEDD8-205ENST00000527046 PRKCDQ05655 676 aa9.6□□□□□ -0.87
NEDD8-205ENST00000527046 CHRNB3Q05901 458 aa9.6□□□□□ -0.87
NEDD8-205ENST00000527046 KPNB1Q14974 876 aaKnown RBP9.6□□□□□ -0.87
NEDD8-205ENST00000527046 TRAM2Q15035 370 aa9.6□□□□□ -0.87
NEDD8-205ENST00000527046 OR7A5Q15622 319 aa9.6□□□□□ -0.87
NEDD8-205ENST00000527046 SGCBQ16585 318 aa9.6□□□□□ -0.87
NEDD8-205ENST00000527046 ZNF74Q16587 644 aa9.6□□□□□ -0.87
NEDD8-205ENST00000527046 FAM69AQ5T7M9 428 aa9.6□□□□□ -0.87
NEDD8-205ENST00000527046 RIPPLY2Q5TAB7 128 aa9.6□□□□□ -0.87
NEDD8-205ENST00000527046 C1orf146Q5VVC0 180 aa9.6□□□□□ -0.87
NEDD8-205ENST00000527046 ABLIM2Q6H8Q1 611 aa9.6□□□□□ -0.87
NEDD8-205ENST00000527046 HMBOX1Q6NT76 420 aa9.6□□□□□ -0.87
NEDD8-205ENST00000527046 TTC33Q6PID6 262 aaPredicted RBP9.6□□□□□ -0.87
NEDD8-205ENST00000527046 ZER1Q7Z7L7 766 aa9.6□□□□□ -0.87
NEDD8-205ENST00000527046 SPATA24Q86W54 205 aa9.6□□□□□ -0.87
NEDD8-205ENST00000527046 CCDC71Q8IV32 467 aaPredicted RBP9.6□□□□□ -0.87
NEDD8-205ENST00000527046 OR52J3Q8NH60 311 aa9.6□□□□□ -0.87
NEDD8-205ENST00000527046 ABHD3Q8WU67 409 aa9.6□□□□□ -0.87
NEDD8-205ENST00000527046 LRGUKQ96M69 825 aa9.6□□□□□ -0.87
NEDD8-205ENST00000527046 HS6ST2Q96MM7 605 aa9.6□□□□□ -0.87
NEDD8-205ENST00000527046 PSD2Q9BQI7 771 aa9.6□□□□□ -0.87
NEDD8-205ENST00000527046 FNDC11Q9BVV2 318 aa9.6□□□□□ -0.87
NEDD8-205ENST00000527046 SLC19A3Q9BZV2 496 aa9.6□□□□□ -0.87
NEDD8-205ENST00000527046 ANKRD19PQ9H560 264 aa9.6□□□□□ -0.87
NEDD8-205ENST00000527046 ARMC1Q9NVT9 282 aa9.6□□□□□ -0.87
NEDD8-205ENST00000527046 PAQR5Q9NXK6 330 aaPredicted RBP9.6□□□□□ -0.87
NEDD8-205ENST00000527046 TAS2R5Q9NYW4 299 aa9.6□□□□□ -0.87
NEDD8-205ENST00000527046 STOML1Q9UBI4 398 aa9.6□□□□□ -0.87
NEDD8-205ENST00000527046 RNF6Q9Y252 685 aa9.6□□□□□ -0.87
NEDD8-205ENST00000527046 SLC5A6Q9Y289 635 aa9.6□□□□□ -0.87
NEDD8-205ENST00000527046 SPIN1Q9Y657 262 aaPredicted RBP9.6□□□□□ -0.87
NEDD8-205ENST00000527046 RP1L1Q8IWN7 2480 aaPredicted RBP9.6□□□□□ -0.87
NEDD8-205ENST00000527046 FREM1Q5H8C1 2179 aa9.6□□□□□ -0.87
NEDD8-205ENST00000527046 IGKV3D-15A0A087WSY6 115 aa9.59□□□□□ -0.87
NEDD8-205ENST00000527046 LOC102725191A0A1B0GVB3 256 aa9.59□□□□□ -0.87
NEDD8-205ENST00000527046 AQP7P3A6NL99 342 aa9.59□□□□□ -0.87
NEDD8-205ENST00000527046 ENO4A6NNW6 628 aa9.59□□□□□ -0.87
NEDD8-205ENST00000527046 KPNA4O00629 521 aaPredicted RBP9.59□□□□□ -0.87
NEDD8-205ENST00000527046 CDC42EP2O14613 210 aa9.59□□□□□ -0.87
NEDD8-205ENST00000527046 DNPH1O43598 174 aa9.59□□□□□ -0.87
NEDD8-205ENST00000527046 ENTPD5O75356 428 aa9.59□□□□□ -0.87
NEDD8-205ENST00000527046 PTP4A3O75365 173 aa9.59□□□□□ -0.87
NEDD8-205ENST00000527046 AHSA1O95433 338 aa9.59□□□□□ -0.87
NEDD8-205ENST00000527046 CH25HO95992 272 aa9.59□□□□□ -0.87
NEDD8-205ENST00000527046 ITGA2P17301 1181 aa9.59□□□□□ -0.87
NEDD8-205ENST00000527046 GRPRP30550 384 aa9.59□□□□□ -0.87
NEDD8-205ENST00000527046 SLC7A1P30825 629 aa9.59□□□□□ -0.87
NEDD8-205ENST00000527046 RRM2P31350 389 aa9.59□□□□□ -0.87
NEDD8-205ENST00000527046 OMPP47874 163 aa9.59□□□□□ -0.87
NEDD8-205ENST00000527046 FXYD6P3P58550 94 aa9.59□□□□□ -0.87
NEDD8-205ENST00000527046 SLC35A1P78382 337 aa9.59□□□□□ -0.87
NEDD8-205ENST00000527046 SLC17A1Q14916 467 aa9.59□□□□□ -0.87
NEDD8-205ENST00000527046 EXOC3L2Q2M3D2 409 aa9.59□□□□□ -0.87
NEDD8-205ENST00000527046 FAM98BQ52LJ0 330 aaKnown RBP9.59□□□□□ -0.87
NEDD8-205ENST00000527046 ANKRD34AQ69YU3 496 aa9.59□□□□□ -0.87
NEDD8-205ENST00000527046 OR2T5Q6IEZ7 315 aa9.59□□□□□ -0.87
NEDD8-205ENST00000527046 PAQR6Q6TCH4 344 aa9.59□□□□□ -0.87
NEDD8-205ENST00000527046 C5orf46Q6UWT4 87 aa9.59□□□□□ -0.87
NEDD8-205ENST00000527046 TMPRSS11FQ6ZWK6 438 aa9.59□□□□□ -0.87
NEDD8-205ENST00000527046 MBOAT2Q6ZWT7 520 aa9.59□□□□□ -0.87
NEDD8-205ENST00000527046 FCRLAQ7L513 359 aa9.59□□□□□ -0.87
NEDD8-205ENST00000527046 NUFIP2Q7Z417 695 aaKnown RBP9.59□□□□□ -0.87
NEDD8-205ENST00000527046 EPHX4Q8IUS5 362 aa9.59□□□□□ -0.87
NEDD8-205ENST00000527046 NRMQ8IXM6 262 aa9.59□□□□□ -0.87
NEDD8-205ENST00000527046 RNF113BQ8IZP6 322 aaKnown RBP9.59□□□□□ -0.87
NEDD8-205ENST00000527046 KDM8Q8N371 416 aa9.59□□□□□ -0.87
NEDD8-205ENST00000527046 LRRC75AQ8NAA5 344 aa9.59□□□□□ -0.87
NEDD8-205ENST00000527046 OR2T29Q8NH02 315 aa9.59□□□□□ -0.87
NEDD8-205ENST00000527046 RNF217Q8TC41 542 aa9.59□□□□□ -0.87
NEDD8-205ENST00000527046 ITLN2Q8WWU7 325 aaPredicted RBP9.59□□□□□ -0.87
NEDD8-205ENST00000527046 ACOT11Q8WXI4 607 aaPredicted RBP9.59□□□□□ -0.87
NEDD8-205ENST00000527046 POP5Q969H6 163 aaKnown RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms