RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 CMTM3Q96MX0 182 aa10.15□□□□□ -0.79
HDAC9-228ENST00000524023 NMNAT2Q9BZQ4 307 aa10.15□□□□□ -0.79
HDAC9-228ENST00000524023 NOX4Q9NPH5 578 aa10.15□□□□□ -0.79
HDAC9-228ENST00000524023 HCN3Q9P1Z3 774 aa10.15□□□□□ -0.79
HDAC9-228ENST00000524023 LRIT1Q9P2V4 623 aa10.15□□□□□ -0.79
HDAC9-228ENST00000524023 HS3ST3A1Q9Y663 406 aa10.15□□□□□ -0.79
HDAC9-228ENST00000524023 KNL1Q8NG31 2342 aa10.14□□□□□ -0.79
HDAC9-228ENST00000524023 A0A0A6YYC8 382 aaPredicted RBP10.14□□□□□ -0.79
HDAC9-228ENST00000524023 KIR2DS5A0A0G2JLQ3 304 aa10.14□□□□□ -0.79
HDAC9-228ENST00000524023 A0A0G2JNG1 304 aa10.14□□□□□ -0.79
HDAC9-228ENST00000524023 ANKRD61A6NGH8 418 aa10.14□□□□□ -0.79
HDAC9-228ENST00000524023 ZNF879B4DU55 563 aa10.14□□□□□ -0.79
HDAC9-228ENST00000524023 I3L1I5 382 aaPredicted RBP10.14□□□□□ -0.79
HDAC9-228ENST00000524023 KIR2DS3K7RE56 304 aa10.14□□□□□ -0.79
HDAC9-228ENST00000524023 TNFRSF10AO00220 468 aa10.14□□□□□ -0.79
HDAC9-228ENST00000524023 PIN1P1O15428 100 aa10.14□□□□□ -0.79
HDAC9-228ENST00000524023 PPM1BO75688 479 aa10.14□□□□□ -0.79
HDAC9-228ENST00000524023 CSTAP01040 98 aa10.14□□□□□ -0.79
HDAC9-228ENST00000524023 MT-ND4P03905 459 aa10.14□□□□□ -0.79
HDAC9-228ENST00000524023 WNT1P04628 370 aa10.14□□□□□ -0.79
HDAC9-228ENST00000524023 H2AFB2P0C5Z0 115 aa10.14□□□□□ -0.79
HDAC9-228ENST00000524023 CT45A8P0DMV1 189 aa10.14□□□□□ -0.79
HDAC9-228ENST00000524023 CT45A9P0DMV2 189 aa10.14□□□□□ -0.79
HDAC9-228ENST00000524023 ANXA3P12429 323 aa10.14□□□□□ -0.79
HDAC9-228ENST00000524023 TYRP1P17643 537 aa10.14□□□□□ -0.79
HDAC9-228ENST00000524023 EN2P19622 333 aaPredicted RBP10.14□□□□□ -0.79
HDAC9-228ENST00000524023 SRMP19623 302 aa10.14□□□□□ -0.79
HDAC9-228ENST00000524023 CXCL3P19876 107 aa10.14□□□□□ -0.79
HDAC9-228ENST00000524023 PSMD4P55036 377 aaKnown RBP10.14□□□□□ -0.79
HDAC9-228ENST00000524023 RAG2P55895 527 aa10.14□□□□□ -0.79
HDAC9-228ENST00000524023 HYAL1Q12794 435 aa10.14□□□□□ -0.79
HDAC9-228ENST00000524023 DYRK1AQ13627 763 aa10.14□□□□□ -0.79
HDAC9-228ENST00000524023 ZNF267Q14586 743 aaPredicted RBP10.14□□□□□ -0.79
HDAC9-228ENST00000524023 KIR2DS5Q14953 304 aa10.14□□□□□ -0.79
HDAC9-228ENST00000524023 NNATQ16517 81 aa10.14□□□□□ -0.79
HDAC9-228ENST00000524023 GSG1Q2KHT4 349 aa10.14□□□□□ -0.79
HDAC9-228ENST00000524023 CT45A2Q5DJT8 189 aa10.14□□□□□ -0.79
HDAC9-228ENST00000524023 ZNF542PQ5EBM4 170 aa10.14□□□□□ -0.79
HDAC9-228ENST00000524023 SLC22A10Q63ZE4 541 aa10.14□□□□□ -0.79
HDAC9-228ENST00000524023 MTFR2Q6P444 385 aa10.14□□□□□ -0.79
HDAC9-228ENST00000524023 ZNF782Q6ZMW2 699 aaPredicted RBP10.14□□□□□ -0.79
HDAC9-228ENST00000524023 BTN2A1Q7KYR7 527 aa10.14□□□□□ -0.79
HDAC9-228ENST00000524023 TIGD4Q8IY51 512 aa10.14□□□□□ -0.79
HDAC9-228ENST00000524023 IZUMO1Q8IYV9 350 aa10.14□□□□□ -0.79
HDAC9-228ENST00000524023 CMTM4Q8IZR5 234 aa10.14□□□□□ -0.79
HDAC9-228ENST00000524023 ZNF687Q8N1G0 1237 aa10.14□□□□□ -0.79
HDAC9-228ENST00000524023 OR6K6Q8NGW6 343 aa10.14□□□□□ -0.79
HDAC9-228ENST00000524023 ZNF431Q8TF32 576 aaPredicted RBP10.14□□□□□ -0.79
HDAC9-228ENST00000524023 SMIM4Q8WVI0 70 aa10.14□□□□□ -0.79
HDAC9-228ENST00000524023 PHYHIPQ92561 330 aa10.14□□□□□ -0.79
HDAC9-228ENST00000524023 RASD2Q96D21 266 aa10.14□□□□□ -0.79
HDAC9-228ENST00000524023 MRPL48Q96GC5 212 aaKnown RBP10.14□□□□□ -0.79
HDAC9-228ENST00000524023 GPR137Q96N19 417 aa10.14□□□□□ -0.79
HDAC9-228ENST00000524023 DERL3Q96Q80 235 aa10.14□□□□□ -0.79
HDAC9-228ENST00000524023 G6PC3Q9BUM1 346 aa10.14□□□□□ -0.79
HDAC9-228ENST00000524023 SEMA6CQ9H3T2 930 aa10.14□□□□□ -0.79
HDAC9-228ENST00000524023 AUNIPQ9H7T9 357 aa10.14□□□□□ -0.79
HDAC9-228ENST00000524023 Q9N2J8 555 aa10.14□□□□□ -0.79
HDAC9-228ENST00000524023 C2orf42Q9NWW7 574 aa10.14□□□□□ -0.79
HDAC9-228ENST00000524023 MGAT4AQ9UM21 535 aa10.14□□□□□ -0.79
HDAC9-228ENST00000524023 ZNF337Q9Y3M9 751 aa10.14□□□□□ -0.79
HDAC9-228ENST00000524023 TDRD6O60522 2096 aaKnown RBP10.14□□□□□ -0.79
HDAC9-228ENST00000524023 SERINC4A6NH21 518 aa10.14□□□□□ -0.79
HDAC9-228ENST00000524023 OR5K4A6NMS3 321 aa10.14□□□□□ -0.79
HDAC9-228ENST00000524023 PRAMEF2O60811 474 aa10.14□□□□□ -0.79
HDAC9-228ENST00000524023 CTNSO60931 367 aa10.14□□□□□ -0.79
HDAC9-228ENST00000524023 CDC123O75794 336 aaPredicted RBP10.14□□□□□ -0.79
HDAC9-228ENST00000524023 OR7A10O76100 309 aa10.14□□□□□ -0.79
HDAC9-228ENST00000524023 ADRB1P08588 477 aa10.14□□□□□ -0.79
HDAC9-228ENST00000524023 RNH1P13489 461 aaKnown RBP10.14□□□□□ -0.79
HDAC9-228ENST00000524023 GDNFP39905 211 aa10.14□□□□□ -0.79
HDAC9-228ENST00000524023 RPS4XP62701 263 aaKnown RBP10.14□□□□□ -0.79
HDAC9-228ENST00000524023 ERVK-25P63136 954 aa10.14□□□□□ -0.79
HDAC9-228ENST00000524023 SNTB2Q13425 540 aaKnown RBP10.14□□□□□ -0.79
HDAC9-228ENST00000524023 CAMK2BQ13554 666 aa10.14□□□□□ -0.79
HDAC9-228ENST00000524023 ISXQ2M1V0 245 aa10.14□□□□□ -0.79
HDAC9-228ENST00000524023 FRMD1Q8N878 549 aa10.14□□□□□ -0.79
HDAC9-228ENST00000524023 OR11H4Q8NGC9 324 aa10.14□□□□□ -0.79
HDAC9-228ENST00000524023 OR4C3Q8NH37 302 aa10.14□□□□□ -0.79
HDAC9-228ENST00000524023 RPS4Y2Q8TD47 263 aa10.14□□□□□ -0.79
HDAC9-228ENST00000524023 C3orf49Q96BT1 292 aa10.14□□□□□ -0.79
HDAC9-228ENST00000524023 ORAI1Q96D31 301 aa10.14□□□□□ -0.79
HDAC9-228ENST00000524023 CITED4Q96RK1 184 aa10.14□□□□□ -0.79
HDAC9-228ENST00000524023 GAS2L1Q99501 681 aaPredicted RBP10.14□□□□□ -0.79
HDAC9-228ENST00000524023 GFI1Q99684 422 aa10.14□□□□□ -0.79
HDAC9-228ENST00000524023 ANKRD10Q9NXR5 420 aa10.14□□□□□ -0.79
HDAC9-228ENST00000524023 POMT2Q9UKY4 750 aa10.14□□□□□ -0.79
HDAC9-228ENST00000524023 TP53BP1Q12888 1972 aaPredicted RBP10.13□□□□□ -0.79
HDAC9-228ENST00000524023 IDSB3KWA1 339 aa10.13□□□□□ -0.79
HDAC9-228ENST00000524023 ZNF749O43361 778 aa10.13□□□□□ -0.79
HDAC9-228ENST00000524023 TSC22D2O75157 780 aa10.13□□□□□ -0.79
HDAC9-228ENST00000524023 SYPP08247 313 aa10.13□□□□□ -0.79
HDAC9-228ENST00000524023 GPR3P46089 330 aa10.13□□□□□ -0.79
HDAC9-228ENST00000524023 RABIFP47224 123 aa10.13□□□□□ -0.79
HDAC9-228ENST00000524023 IGLV3-21P80748 117 aaPredicted RBP10.13□□□□□ -0.79
HDAC9-228ENST00000524023 HSF2Q03933 536 aa10.13□□□□□ -0.79
HDAC9-228ENST00000524023 ERV3-1Q14264 604 aa10.13□□□□□ -0.79
HDAC9-228ENST00000524023 ST3GAL2Q16842 350 aa10.13□□□□□ -0.79
HDAC9-228ENST00000524023 HES5Q5TA89 166 aa10.13□□□□□ -0.79
HDAC9-228ENST00000524023 ZBTB37Q5TC79 503 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms