RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 TRIM33Q9UPN9 1127 aa14.3□□□□□ -0.12
CLN8-206ENST00000523237 LAMP3Q9UQV4 416 aa14.3□□□□□ -0.12
CLN8-206ENST00000523237 TMEM229AB2RXF0 380 aa14.29□□□□□ -0.12
CLN8-206ENST00000523237 FRS3O43559 492 aa14.29□□□□□ -0.12
CLN8-206ENST00000523237 GPX2P18283 190 aa14.29□□□□□ -0.12
CLN8-206ENST00000523237 HOXC5Q00444 222 aa14.29□□□□□ -0.12
CLN8-206ENST00000523237 GPAT4Q86UL3 456 aa14.29□□□□□ -0.12
CLN8-206ENST00000523237 KBTBD8Q8NFY9 601 aa14.29□□□□□ -0.12
CLN8-206ENST00000523237 OR9K2Q8NGE7 335 aa14.29□□□□□ -0.12
CLN8-206ENST00000523237 OR52E4Q8NGH9 312 aa14.29□□□□□ -0.12
CLN8-206ENST00000523237 OR52N5Q8NH56 324 aa14.29□□□□□ -0.12
CLN8-206ENST00000523237 SIKE1Q9BRV8 207 aa14.29□□□□□ -0.12
CLN8-206ENST00000523237 TRIM2Q9C040 744 aa14.29□□□□□ -0.12
CLN8-206ENST00000523237 TMEM38AQ9H6F2 299 aa14.29□□□□□ -0.12
CLN8-206ENST00000523237 SLC7A10Q9NS82 523 aa14.29□□□□□ -0.12
CLN8-206ENST00000523237 LEF1Q9UJU2 399 aaPredicted RBP14.29□□□□□ -0.12
CLN8-206ENST00000523237 DCTN4Q9UJW0 460 aa14.29□□□□□ -0.12
CLN8-206ENST00000523237 PRORSD1PA6NEY8 169 aa14.28□□□□□ -0.12
CLN8-206ENST00000523237 ELOA3DA6NLF2 546 aaPredicted RBP14.28□□□□□ -0.12
CLN8-206ENST00000523237 FAM171A2A8MVW0 826 aa14.28□□□□□ -0.12
CLN8-206ENST00000523237 EDF1O60869 148 aaKnown RBP14.28□□□□□ -0.12
CLN8-206ENST00000523237 NPIPB7O75200 414 aa14.28□□□□□ -0.12
CLN8-206ENST00000523237 VAMP5O95183 116 aa14.28□□□□□ -0.12
CLN8-206ENST00000523237 AHSA1O95433 338 aa14.28□□□□□ -0.12
CLN8-206ENST00000523237 ITGA5P08648 1049 aa14.28□□□□□ -0.12
CLN8-206ENST00000523237 SLC6A2P23975 617 aa14.28□□□□□ -0.12
CLN8-206ENST00000523237 ATP5J2P56134 94 aa14.28□□□□□ -0.12
CLN8-206ENST00000523237 TGFBR3Q03167 851 aa14.28□□□□□ -0.12
CLN8-206ENST00000523237 SCARB2Q14108 478 aa14.28□□□□□ -0.12
CLN8-206ENST00000523237 GABRA6Q16445 453 aa14.28□□□□□ -0.12
CLN8-206ENST00000523237 ELOA3BQ3SY89 546 aa14.28□□□□□ -0.12
CLN8-206ENST00000523237 TSPO2Q5TGU0 170 aa14.28□□□□□ -0.12
CLN8-206ENST00000523237 DHRS4L2Q6PKH6 230 aa14.28□□□□□ -0.12
CLN8-206ENST00000523237 KLHL17Q6TDP4 642 aa14.28□□□□□ -0.12
CLN8-206ENST00000523237 TMEM108Q6UXF1 575 aa14.28□□□□□ -0.12
CLN8-206ENST00000523237 AAED1Q7RTV5 226 aa14.28□□□□□ -0.12
CLN8-206ENST00000523237 C10orf111Q8N326 155 aa14.28□□□□□ -0.12
CLN8-206ENST00000523237 C1orf162Q8NEQ5 155 aaPredicted RBP14.28□□□□□ -0.12
CLN8-206ENST00000523237 ELOA3Q8NG57 546 aa14.28□□□□□ -0.12
CLN8-206ENST00000523237 SMAP2Q8WU79 429 aaPredicted RBP14.28□□□□□ -0.12
CLN8-206ENST00000523237 NEUROG1Q92886 237 aa14.28□□□□□ -0.12
CLN8-206ENST00000523237 RADILQ96JH8 1075 aa14.28□□□□□ -0.12
CLN8-206ENST00000523237 MUS81Q96NY9 551 aa14.28□□□□□ -0.12
CLN8-206ENST00000523237 ZNF607Q96SK3 696 aa14.28□□□□□ -0.12
CLN8-206ENST00000523237 NPHS2Q9NP85 383 aa14.28□□□□□ -0.12
CLN8-206ENST00000523237 NPAP1Q9NZP6 1156 aa14.28□□□□□ -0.12
CLN8-206ENST00000523237 SLC25A15Q9Y619 301 aa14.28□□□□□ -0.12
CLN8-206ENST00000523237 PDLIM1O00151 329 aa14.27□□□□□ -0.13
CLN8-206ENST00000523237 ABCD4O14678 606 aa14.27□□□□□ -0.13
CLN8-206ENST00000523237 DANCRP0C864 163 aa14.27□□□□□ -0.13
CLN8-206ENST00000523237 PTAFRP25105 342 aa14.27□□□□□ -0.13
CLN8-206ENST00000523237 GTF2E2P29084 291 aaKnown RBP14.27□□□□□ -0.13
CLN8-206ENST00000523237 FOXG1P55316 489 aaPredicted RBP14.27□□□□□ -0.13
CLN8-206ENST00000523237 C9orf135Q5VTT2 229 aa14.27□□□□□ -0.13
CLN8-206ENST00000523237 C6orf89Q6UWU4 347 aa14.27□□□□□ -0.13
CLN8-206ENST00000523237 DLEU7Q6UYE1 221 aa14.27□□□□□ -0.13
CLN8-206ENST00000523237 ABHD12BQ7Z5M8 362 aaPredicted RBP14.27□□□□□ -0.13
CLN8-206ENST00000523237 DHDDSQ86SQ9 333 aa14.27□□□□□ -0.13
CLN8-206ENST00000523237 C17orf78Q8N4C9 275 aa14.27□□□□□ -0.13
CLN8-206ENST00000523237 LSMEM1Q8N8F7 131 aa14.27□□□□□ -0.13
CLN8-206ENST00000523237 ZIC4Q8N9L1 334 aa14.27□□□□□ -0.13
CLN8-206ENST00000523237 POMGNT2Q8NAT1 580 aa14.27□□□□□ -0.13
CLN8-206ENST00000523237 BHLHE22Q8NFJ8 381 aaPredicted RBP14.27□□□□□ -0.13
CLN8-206ENST00000523237 MFSD8Q8NHS3 518 aa14.27□□□□□ -0.13
CLN8-206ENST00000523237 TRMT61AQ96FX7 289 aaKnown RBP14.27□□□□□ -0.13
CLN8-206ENST00000523237 COX4I2Q96KJ9 171 aa14.27□□□□□ -0.13
CLN8-206ENST00000523237 ZNF385AQ96PM9 386 aaKnown RBP14.27□□□□□ -0.13
CLN8-206ENST00000523237 SMR3AQ99954 134 aa14.27□□□□□ -0.13
CLN8-206ENST00000523237 CPPED1Q9BRF8 314 aaPredicted RBP14.27□□□□□ -0.13
CLN8-206ENST00000523237 AMBRA1Q9C0C7 1298 aa14.27□□□□□ -0.13
CLN8-206ENST00000523237 SLCO5A1Q9H2Y9 848 aa14.27□□□□□ -0.13
CLN8-206ENST00000523237 IKZF5Q9H5V7 419 aa14.27□□□□□ -0.13
CLN8-206ENST00000523237 C12orf10Q9HB07 376 aa14.27□□□□□ -0.13
CLN8-206ENST00000523237 MGAT4BQ9UQ53 548 aa14.27□□□□□ -0.13
CLN8-206ENST00000523237 ANGPT4Q9Y264 503 aa14.27□□□□□ -0.13
CLN8-206ENST00000523237 RASD1Q9Y272 281 aa14.27□□□□□ -0.13
CLN8-206ENST00000523237 NDUFAF1Q9Y375 327 aa14.27□□□□□ -0.13
CLN8-206ENST00000523237 CADP27708 2225 aa14.27□□□□□ -0.13
CLN8-206ENST00000523237 A0A1W2PR80 420 aa14.26□□□□□ -0.13
CLN8-206ENST00000523237 SHISA9B4DS77 424 aa14.26□□□□□ -0.13
CLN8-206ENST00000523237 H7C1Q1 480 aa14.26□□□□□ -0.13
CLN8-206ENST00000523237 OVOL3O00110 214 aa14.26□□□□□ -0.13
CLN8-206ENST00000523237 ANGPT2O15123 496 aa14.26□□□□□ -0.13
CLN8-206ENST00000523237 SERPINB7O75635 380 aa14.26□□□□□ -0.13
CLN8-206ENST00000523237 SOD3P08294 240 aa14.26□□□□□ -0.13
CLN8-206ENST00000523237 MPGP29372 298 aa14.26□□□□□ -0.13
CLN8-206ENST00000523237 RPS5P46782 204 aaKnown RBP14.26□□□□□ -0.13
CLN8-206ENST00000523237 ZNF83P51522 516 aa14.26□□□□□ -0.13
CLN8-206ENST00000523237 P2RY4P51582 365 aa14.26□□□□□ -0.13
CLN8-206ENST00000523237 CDH11P55287 796 aa14.26□□□□□ -0.13
CLN8-206ENST00000523237 NCALDP61601 193 aa14.26□□□□□ -0.13
CLN8-206ENST00000523237 ADRM1Q16186 407 aa14.26□□□□□ -0.13
CLN8-206ENST00000523237 RUNDC3AQ59EK9 446 aa14.26□□□□□ -0.13
CLN8-206ENST00000523237 C1QTNF12Q5T7M4 302 aa14.26□□□□□ -0.13
CLN8-206ENST00000523237 C5orf46Q6UWT4 87 aa14.26□□□□□ -0.13
CLN8-206ENST00000523237 CLEC9AQ6UXN8 241 aa14.26□□□□□ -0.13
CLN8-206ENST00000523237 CREB3L2Q70SY1 520 aa14.26□□□□□ -0.13
CLN8-206ENST00000523237 DPP10Q8N608 796 aa14.26□□□□□ -0.13
CLN8-206ENST00000523237 HIPK4Q8NE63 616 aa14.26□□□□□ -0.13
CLN8-206ENST00000523237 TSPEARQ8WU66 669 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms