RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 NAT16Q8N8M0 369 aa6.95□□□□□ -1.3
HDAC3-216ENST00000523088 CCNYQ8ND76 341 aa6.95□□□□□ -1.3
HDAC3-216ENST00000523088 NLGN4YQ8NFZ3 816 aaPredicted RBP6.95□□□□□ -1.3
HDAC3-216ENST00000523088 OR11H1Q8NG94 326 aa6.95□□□□□ -1.3
HDAC3-216ENST00000523088 OR4F15Q8NGB8 312 aa6.95□□□□□ -1.3
HDAC3-216ENST00000523088 OR4D6Q8NGJ1 314 aa6.95□□□□□ -1.3
HDAC3-216ENST00000523088 OR5L2Q8NGL0 311 aa6.95□□□□□ -1.3
HDAC3-216ENST00000523088 OR11H2Q8NH07 326 aa6.95□□□□□ -1.3
HDAC3-216ENST00000523088 WDR20Q8TBZ3 569 aa6.95□□□□□ -1.3
HDAC3-216ENST00000523088 STK35Q8TDR2 534 aa6.95□□□□□ -1.3
HDAC3-216ENST00000523088 OSTF1Q92882 214 aa6.95□□□□□ -1.3
HDAC3-216ENST00000523088 KAT5Q92993 513 aa6.95□□□□□ -1.3
HDAC3-216ENST00000523088 EID2BQ96D98 161 aa6.95□□□□□ -1.3
HDAC3-216ENST00000523088 MS4A3Q96HJ5 214 aa6.95□□□□□ -1.3
HDAC3-216ENST00000523088 EPYCQ99645 322 aa6.95□□□□□ -1.3
HDAC3-216ENST00000523088 VPS25Q9BRG1 176 aa6.95□□□□□ -1.3
HDAC3-216ENST00000523088 DPH7Q9BTV6 452 aa6.95□□□□□ -1.3
HDAC3-216ENST00000523088 ALOXE3Q9BYJ1 711 aa6.95□□□□□ -1.3
HDAC3-216ENST00000523088 WWTR1Q9GZV5 400 aa6.95□□□□□ -1.3
HDAC3-216ENST00000523088 P2RY12Q9H244 342 aa6.95□□□□□ -1.3
HDAC3-216ENST00000523088 FAM83DQ9H4H8 585 aa6.95□□□□□ -1.3
HDAC3-216ENST00000523088 SLC32A1Q9H598 525 aa6.95□□□□□ -1.3
HDAC3-216ENST00000523088 SOX17Q9H6I2 414 aaPredicted RBP6.95□□□□□ -1.3
HDAC3-216ENST00000523088 RHOFQ9HBH0 211 aa6.95□□□□□ -1.3
HDAC3-216ENST00000523088 EMC7Q9NPA0 242 aa6.95□□□□□ -1.3
HDAC3-216ENST00000523088 SLC2A9Q9NRM0 540 aa6.95□□□□□ -1.3
HDAC3-216ENST00000523088 P4HTMQ9NXG6 502 aa6.95□□□□□ -1.3
HDAC3-216ENST00000523088 CACNA2D2Q9NY47 1150 aa6.95□□□□□ -1.3
HDAC3-216ENST00000523088 SLC23A1Q9UHI7 598 aa6.95□□□□□ -1.3
HDAC3-216ENST00000523088 OSGIN1Q9UJX0 560 aa6.95□□□□□ -1.3
HDAC3-216ENST00000523088 FBXL3Q9UKT7 428 aa6.95□□□□□ -1.3
HDAC3-216ENST00000523088 PRPF19Q9UMS4 504 aaKnown RBP6.95□□□□□ -1.3
HDAC3-216ENST00000523088 ANGPT4Q9Y264 503 aa6.95□□□□□ -1.3
HDAC3-216ENST00000523088 TRAPPC4Q9Y296 219 aa6.95□□□□□ -1.3
HDAC3-216ENST00000523088 COLEC10Q9Y6Z7 277 aa6.95□□□□□ -1.3
HDAC3-216ENST00000523088 URGCP-MRPS24S4R325 110 aa6.95□□□□□ -1.3
HDAC3-216ENST00000523088 PCNX2A6NKB5 2137 aa6.95□□□□□ -1.3
HDAC3-216ENST00000523088 ACACBO00763 2458 aa6.94□□□□□ -1.3
HDAC3-216ENST00000523088 NYNRINQ9P2P1 1898 aaKnown RBP6.94□□□□□ -1.3
HDAC3-216ENST00000523088 LAMA1P25391 3075 aa6.94□□□□□ -1.3
HDAC3-216ENST00000523088 AQP12BA6NM10 295 aa6.94□□□□□ -1.3
HDAC3-216ENST00000523088 DISC1C4P0D8 188 aa6.94□□□□□ -1.3
HDAC3-216ENST00000523088 RNF225M0QZC1 329 aaPredicted RBP6.94□□□□□ -1.3
HDAC3-216ENST00000523088 M0R036 132 aa6.94□□□□□ -1.3
HDAC3-216ENST00000523088 XPNPEP2O43895 674 aa6.94□□□□□ -1.3
HDAC3-216ENST00000523088 EDF1O60869 148 aaKnown RBP6.94□□□□□ -1.3
HDAC3-216ENST00000523088 LYPLA1O75608 230 aaPredicted RBP6.94□□□□□ -1.3
HDAC3-216ENST00000523088 BRI3O95415 125 aa6.94□□□□□ -1.3
HDAC3-216ENST00000523088 ADH1BP00325 375 aa6.94□□□□□ -1.3
HDAC3-216ENST00000523088 IGF2P01344 180 aa6.94□□□□□ -1.3
HDAC3-216ENST00000523088 IFNA5P01569 189 aa6.94□□□□□ -1.3
HDAC3-216ENST00000523088 TK1P04183 234 aa6.94□□□□□ -1.3
HDAC3-216ENST00000523088 OR8U8P0C7N1 319 aa6.94□□□□□ -1.3
HDAC3-216ENST00000523088 CISD3P0C7P0 127 aa6.94□□□□□ -1.3
HDAC3-216ENST00000523088 KITP10721 976 aa6.94□□□□□ -1.3
HDAC3-216ENST00000523088 CEACAM1P13688 526 aa6.94□□□□□ -1.3
HDAC3-216ENST00000523088 FOLR1P15328 257 aa6.94□□□□□ -1.3
HDAC3-216ENST00000523088 GABRG2P18507 467 aa6.94□□□□□ -1.3
HDAC3-216ENST00000523088 CSRP1P21291 193 aaKnown RBP6.94□□□□□ -1.3
HDAC3-216ENST00000523088 TGM2P21980 687 aa6.94□□□□□ -1.3
HDAC3-216ENST00000523088 CA4P22748 312 aa6.94□□□□□ -1.3
HDAC3-216ENST00000523088 FMO4P31512 558 aa6.94□□□□□ -1.3
HDAC3-216ENST00000523088 GATA4P43694 442 aa6.94□□□□□ -1.3
HDAC3-216ENST00000523088 LSSP48449 732 aa6.94□□□□□ -1.3
HDAC3-216ENST00000523088 RORCP51449 518 aa6.94□□□□□ -1.3
HDAC3-216ENST00000523088 EFNA3P52797 238 aa6.94□□□□□ -1.3
HDAC3-216ENST00000523088 CLDN18P56856 261 aa6.94□□□□□ -1.3
HDAC3-216ENST00000523088 ST8SIA6P61647 398 aa6.94□□□□□ -1.3
HDAC3-216ENST00000523088 ADARB1P78563 741 aaKnown RBP6.94□□□□□ -1.3
HDAC3-216ENST00000523088 HSD11B2P80365 405 aa6.94□□□□□ -1.3
HDAC3-216ENST00000523088 CDKL1Q00532 357 aa6.94□□□□□ -1.3
HDAC3-216ENST00000523088 ZFP36L1Q07352 338 aaKnown RBP6.94□□□□□ -1.3
HDAC3-216ENST00000523088 GTF2H2Q13888 395 aa6.94□□□□□ -1.3
HDAC3-216ENST00000523088 PCLAFQ15004 111 aa6.94□□□□□ -1.3
HDAC3-216ENST00000523088 QPRTQ15274 297 aa6.94□□□□□ -1.3
HDAC3-216ENST00000523088 SF3A2Q15428 464 aaKnown RBP6.94□□□□□ -1.3
HDAC3-216ENST00000523088 RPE65Q16518 533 aa6.94□□□□□ -1.3
HDAC3-216ENST00000523088 NDUFA9Q16795 377 aa6.94□□□□□ -1.3
HDAC3-216ENST00000523088 AMZ1Q400G9 498 aa6.94□□□□□ -1.3
HDAC3-216ENST00000523088 IFI44LQ53G44 452 aa6.94□□□□□ -1.3
HDAC3-216ENST00000523088 FAM71E1Q6IPT2 247 aa6.94□□□□□ -1.3
HDAC3-216ENST00000523088 GTF2H2CQ6P1K8 395 aa6.94□□□□□ -1.3
HDAC3-216ENST00000523088 SLC23A3Q6PIS1 610 aa6.94□□□□□ -1.3
HDAC3-216ENST00000523088 BLOC1S3Q6QNY0 202 aa6.94□□□□□ -1.3
HDAC3-216ENST00000523088 ATRAIDQ6UW56 229 aa6.94□□□□□ -1.3
HDAC3-216ENST00000523088 RASSF6Q6ZTQ3 369 aa6.94□□□□□ -1.3
HDAC3-216ENST00000523088 MED25Q71SY5 747 aa6.94□□□□□ -1.3
HDAC3-216ENST00000523088 ABHD13Q7L211 337 aa6.94□□□□□ -1.3
HDAC3-216ENST00000523088 TMEM144Q7Z5S9 345 aa6.94□□□□□ -1.3
HDAC3-216ENST00000523088 ABI3BPQ7Z7G0 1075 aa6.94□□□□□ -1.3
HDAC3-216ENST00000523088 BVESQ8NE79 360 aa6.94□□□□□ -1.3
HDAC3-216ENST00000523088 CADM4Q8NFZ8 388 aa6.94□□□□□ -1.3
HDAC3-216ENST00000523088 OR9Q1Q8NGQ5 310 aa6.94□□□□□ -1.3
HDAC3-216ENST00000523088 OR13C5Q8NGS8 318 aa6.94□□□□□ -1.3
HDAC3-216ENST00000523088 OR8U1Q8NH10 309 aa6.94□□□□□ -1.3
HDAC3-216ENST00000523088 OR4C6Q8NH72 309 aa6.94□□□□□ -1.3
HDAC3-216ENST00000523088 OR5K1Q8NHB7 308 aa6.94□□□□□ -1.3
HDAC3-216ENST00000523088 LCN9Q8WX39 176 aa6.94□□□□□ -1.3
HDAC3-216ENST00000523088 ACOT12Q8WYK0 555 aa6.94□□□□□ -1.3
HDAC3-216ENST00000523088 CFHR4Q92496 578 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms