RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 NANSQ9NR45 359 aa3.34□□□□□ -1.87
HMGB1P1-201ENST00000522557 ETNK2Q9NVF9 386 aa3.34□□□□□ -1.87
HMGB1P1-201ENST00000522557 SPATA7Q9P0W8 599 aa3.34□□□□□ -1.87
HMGB1P1-201ENST00000522557 KLHL21Q9UJP4 597 aa3.34□□□□□ -1.87
HMGB1P1-201ENST00000522557 TP53TG3Q9ULZ0 132 aa3.34□□□□□ -1.87
HMGB1P1-201ENST00000522557 PLLPQ9Y342 182 aa3.34□□□□□ -1.87
HMGB1P1-201ENST00000522557 CSDC2Q9Y534 153 aaKnown RBP3.34□□□□□ -1.87
HMGB1P1-201ENST00000522557 SH3TC1Q8TE82 1336 aa3.34□□□□□ -1.87
HMGB1P1-201ENST00000522557 POLA1P09884 1462 aaPredicted RBP3.34□□□□□ -1.88
HMGB1P1-201ENST00000522557 MAGI1Q96QZ7 1491 aaPredicted RBP3.34□□□□□ -1.88
HMGB1P1-201ENST00000522557 TOP2AP11388 1531 aaKnown RBP3.34□□□□□ -1.88
HMGB1P1-201ENST00000522557 TCRBV9S1A1TA0A576 114 aa3.33□□□□□ -1.88
HMGB1P1-201ENST00000522557 TMEM50AO95807 157 aa3.33□□□□□ -1.88
HMGB1P1-201ENST00000522557 HSPB1P04792 205 aaKnown RBP3.33□□□□□ -1.88
HMGB1P1-201ENST00000522557 KITLGP21583 273 aa3.33□□□□□ -1.88
HMGB1P1-201ENST00000522557 CD1CP29017 333 aa3.33□□□□□ -1.88
HMGB1P1-201ENST00000522557 CALCRP30988 508 aa3.33□□□□□ -1.88
HMGB1P1-201ENST00000522557 UGT1A3P35503 534 aa3.33□□□□□ -1.88
HMGB1P1-201ENST00000522557 TPMTP51580 245 aa3.33□□□□□ -1.88
HMGB1P1-201ENST00000522557 GBE1Q04446 702 aa3.33□□□□□ -1.88
HMGB1P1-201ENST00000522557 CCDC173Q0VFZ6 552 aa3.33□□□□□ -1.88
HMGB1P1-201ENST00000522557 SRSF5Q13243 272 aaKnown RBP3.33□□□□□ -1.88
HMGB1P1-201ENST00000522557 SSX2Q16385 188 aa3.33□□□□□ -1.88
HMGB1P1-201ENST00000522557 DMRTC1Q5HYR2 192 aa3.33□□□□□ -1.88
HMGB1P1-201ENST00000522557 OR52E8Q6IFG1 317 aa3.33□□□□□ -1.88
HMGB1P1-201ENST00000522557 TFAP2EQ6VUC0 442 aa3.33□□□□□ -1.88
HMGB1P1-201ENST00000522557 IL34Q6ZMJ4 242 aa3.33□□□□□ -1.88
HMGB1P1-201ENST00000522557 MOB1BQ7L9L4 216 aa3.33□□□□□ -1.88
HMGB1P1-201ENST00000522557 NBPF5PQ86XG9 351 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P1-201ENST00000522557 FBXO16Q8IX29 292 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P1-201ENST00000522557 PIANPQ8IYJ0 282 aa3.33□□□□□ -1.88
HMGB1P1-201ENST00000522557 CEND1Q8N111 149 aa3.33□□□□□ -1.88
HMGB1P1-201ENST00000522557 UBE2J2Q8N2K1 259 aa3.33□□□□□ -1.88
HMGB1P1-201ENST00000522557 NECAB1Q8N987 351 aa3.33□□□□□ -1.88
HMGB1P1-201ENST00000522557 ZNF564Q8TBZ8 553 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P1-201ENST00000522557 PGLYRP4Q96LB8 373 aa3.33□□□□□ -1.88
HMGB1P1-201ENST00000522557 TNFRSF19Q9NS68 423 aa3.33□□□□□ -1.88
HMGB1P1-201ENST00000522557 ZNF275Q9NSD4 429 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P1-201ENST00000522557 KIF25Q9UIL4 384 aa3.33□□□□□ -1.88
HMGB1P1-201ENST00000522557 UBQLN1Q9UMX0 589 aaKnown RBP3.33□□□□□ -1.88
HMGB1P1-201ENST00000522557 CLSPNQ9HAW4 1339 aa3.33□□□□□ -1.88
HMGB1P1-201ENST00000522557 PRG4Q92954 1404 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P1-201ENST00000522557 DNMBPQ6XZF7 1577 aa3.33□□□□□ -1.88
HMGB1P1-201ENST00000522557 FAM47DPA6NHR8 397 aa3.32□□□□□ -1.88
HMGB1P1-201ENST00000522557 LOC110117498-PIK3R3F6TDL0 507 aa3.32□□□□□ -1.88
HMGB1P1-201ENST00000522557 DNALI1O14645 258 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P1-201ENST00000522557 CTAG2O75638 210 aa3.32□□□□□ -1.88
HMGB1P1-201ENST00000522557 OR8U8P0C7N1 319 aa3.32□□□□□ -1.88
HMGB1P1-201ENST00000522557 HMGB2P26583 209 aaKnown RBP3.32□□□□□ -1.88
HMGB1P1-201ENST00000522557 EPHX2P34913 555 aa3.32□□□□□ -1.88
HMGB1P1-201ENST00000522557 KIR2DS4P43632 304 aa3.32□□□□□ -1.88
HMGB1P1-201ENST00000522557 GPNMBQ14956 572 aa3.32□□□□□ -1.88
HMGB1P1-201ENST00000522557 BCL7AQ4VC05 210 aa3.32□□□□□ -1.88
HMGB1P1-201ENST00000522557 CASC10Q5T4H9 136 aa3.32□□□□□ -1.88
HMGB1P1-201ENST00000522557 KDM7AQ6ZMT4 941 aa3.32□□□□□ -1.88
HMGB1P1-201ENST00000522557 DNM1P46Q6ZS02 220 aa3.32□□□□□ -1.88
HMGB1P1-201ENST00000522557 RFLNAQ6ZTI6 216 aa3.32□□□□□ -1.88
HMGB1P1-201ENST00000522557 PGAP1Q75T13 922 aa3.32□□□□□ -1.88
HMGB1P1-201ENST00000522557 PAQR7Q86WK9 346 aa3.32□□□□□ -1.88
HMGB1P1-201ENST00000522557 TGIF2LXQ8IUE1 241 aa3.32□□□□□ -1.88
HMGB1P1-201ENST00000522557 CADM2Q8N3J6 435 aa3.32□□□□□ -1.88
HMGB1P1-201ENST00000522557 OR1L6Q8NGR2 347 aa3.32□□□□□ -1.88
HMGB1P1-201ENST00000522557 RHOXF1Q8NHV9 184 aa3.32□□□□□ -1.88
HMGB1P1-201ENST00000522557 OR1E3Q8WZA6 343 aa3.32□□□□□ -1.88
HMGB1P1-201ENST00000522557 NUS1Q96E22 293 aa3.32□□□□□ -1.88
HMGB1P1-201ENST00000522557 PAGE5Q96GU1 130 aa3.32□□□□□ -1.88
HMGB1P1-201ENST00000522557 MS4A14Q96JA4 679 aa3.32□□□□□ -1.88
HMGB1P1-201ENST00000522557 CNN2Q99439 309 aaKnown RBP3.32□□□□□ -1.88
HMGB1P1-201ENST00000522557 GAL3ST1Q99999 423 aa3.32□□□□□ -1.88
HMGB1P1-201ENST00000522557 SELENOIQ9C0D9 397 aa3.32□□□□□ -1.88
HMGB1P1-201ENST00000522557 EHD1Q9H4M9 534 aa3.32□□□□□ -1.88
HMGB1P1-201ENST00000522557 SLC7A8Q9UHI5 535 aa3.32□□□□□ -1.88
HMGB1P1-201ENST00000522557 STAP1Q9ULZ2 295 aa3.32□□□□□ -1.88
HMGB1P1-201ENST00000522557 RPL36Q9Y3U8 105 aaKnown RBP3.32□□□□□ -1.88
HMGB1P1-201ENST00000522557 ZNF646O15015 1829 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P1-201ENST00000522557 EIF4G3O43432 1585 aaKnown RBP3.31□□□□□ -1.88
HMGB1P1-201ENST00000522557 ZFP92A6NM28 416 aa3.31□□□□□ -1.88
HMGB1P1-201ENST00000522557 POLR2DO15514 142 aaKnown RBP3.31□□□□□ -1.88
HMGB1P1-201ENST00000522557 ERLIN1O75477 346 aa3.31□□□□□ -1.88
HMGB1P1-201ENST00000522557 OR7A10O76100 309 aa3.31□□□□□ -1.88
HMGB1P1-201ENST00000522557 TPM2P07951 284 aa3.31□□□□□ -1.88
HMGB1P1-201ENST00000522557 PABPC4LP0CB38 370 aaKnown RBP3.31□□□□□ -1.88
HMGB1P1-201ENST00000522557 RBMY1CP0DJD4 496 aa3.31□□□□□ -1.88
HMGB1P1-201ENST00000522557 HOXD10P28358 340 aa3.31□□□□□ -1.88
HMGB1P1-201ENST00000522557 KLK7P49862 253 aa3.31□□□□□ -1.88
HMGB1P1-201ENST00000522557 KPNA2P52292 529 aaKnown RBP3.31□□□□□ -1.88
HMGB1P1-201ENST00000522557 BCL2L1Q07817 233 aa3.31□□□□□ -1.88
HMGB1P1-201ENST00000522557 SLC10A7Q0GE19 358 aa3.31□□□□□ -1.88
HMGB1P1-201ENST00000522557 OR5I1Q13606 314 aa3.31□□□□□ -1.88
HMGB1P1-201ENST00000522557 ARL6IP1Q15041 203 aa3.31□□□□□ -1.88
HMGB1P1-201ENST00000522557 OXA1LQ15070 435 aa3.31□□□□□ -1.88
HMGB1P1-201ENST00000522557 VAX1Q5SQQ9 334 aa3.31□□□□□ -1.88
HMGB1P1-201ENST00000522557 ARMC12Q5T9G4 340 aa3.31□□□□□ -1.88
HMGB1P1-201ENST00000522557 LRRC66Q68CR7 880 aa3.31□□□□□ -1.88
HMGB1P1-201ENST00000522557 GDPD3Q7L5L3 318 aa3.31□□□□□ -1.88
HMGB1P1-201ENST00000522557 C11orf42Q8N5U0 333 aa3.31□□□□□ -1.88
HMGB1P1-201ENST00000522557 TPRX1Q8N7U7 411 aa3.31□□□□□ -1.88
HMGB1P1-201ENST00000522557 OR4K14Q8NGD5 310 aa3.31□□□□□ -1.88
HMGB1P1-201ENST00000522557 KCNG3Q8TAE7 436 aa3.31□□□□□ -1.88
HMGB1P1-201ENST00000522557 FGF14Q92915 247 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms