RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 OR5D14Q8NGL3 314 aa12.82□□□□□ -0.36
SYNPO-205ENST00000522122 OR52N1Q8NH53 320 aa12.82□□□□□ -0.36
SYNPO-205ENST00000522122 GIMAP1Q8WWP7 306 aa12.82□□□□□ -0.36
SYNPO-205ENST00000522122 ELP4Q96EB1 424 aa12.82□□□□□ -0.36
SYNPO-205ENST00000522122 METTL17Q9H7H0 456 aaPredicted RBP12.82□□□□□ -0.36
SYNPO-205ENST00000522122 CCL27Q9Y4X3 112 aa12.82□□□□□ -0.36
SYNPO-205ENST00000522122 TRBV5-3A0A0A0MS03 114 aa12.82□□□□□ -0.36
SYNPO-205ENST00000522122 TP53P04637 393 aaPredicted RBP12.82□□□□□ -0.36
SYNPO-205ENST00000522122 OR8U9P0C7N5 309 aa12.82□□□□□ -0.36
SYNPO-205ENST00000522122 CDK2P24941 298 aa12.82□□□□□ -0.36
SYNPO-205ENST00000522122 VEGFBP49765 207 aa12.82□□□□□ -0.36
SYNPO-205ENST00000522122 IL13RA1P78552 427 aa12.82□□□□□ -0.36
SYNPO-205ENST00000522122 FOXK2Q01167 660 aa12.82□□□□□ -0.36
SYNPO-205ENST00000522122 CD300CQ08708 224 aa12.82□□□□□ -0.36
SYNPO-205ENST00000522122 OR7E24Q6IFN5 339 aa12.82□□□□□ -0.36
SYNPO-205ENST00000522122 OLIG3Q7RTU3 272 aa12.82□□□□□ -0.36
SYNPO-205ENST00000522122 PLPP6Q8IY26 295 aa12.82□□□□□ -0.36
SYNPO-205ENST00000522122 ZSCAN1Q8NBB4 408 aa12.82□□□□□ -0.36
SYNPO-205ENST00000522122 PBDC1Q9BVG4 233 aa12.82□□□□□ -0.36
SYNPO-205ENST00000522122 NKX2-4Q9H2Z4 354 aa12.82□□□□□ -0.36
SYNPO-205ENST00000522122 A6NL46 340 aa12.82□□□□□ -0.36
SYNPO-205ENST00000522122 HOXC8P31273 242 aa12.82□□□□□ -0.36
SYNPO-205ENST00000522122 TRIM23P36406 574 aa12.82□□□□□ -0.36
SYNPO-205ENST00000522122 CAMLGP49069 296 aa12.82□□□□□ -0.36
SYNPO-205ENST00000522122 TAS2R19P59542 299 aa12.82□□□□□ -0.36
SYNPO-205ENST00000522122 RIN1Q13671 783 aa12.82□□□□□ -0.36
SYNPO-205ENST00000522122 OR7A5Q15622 319 aa12.82□□□□□ -0.36
SYNPO-205ENST00000522122 FOXRED1Q96CU9 486 aaPredicted RBP12.82□□□□□ -0.36
SYNPO-205ENST00000522122 PRR14Q9BWN1 585 aa12.82□□□□□ -0.36
SYNPO-205ENST00000522122 UBQLN3Q9H347 655 aa12.82□□□□□ -0.36
SYNPO-205ENST00000522122 ASF1BQ9NVP2 202 aa12.82□□□□□ -0.36
SYNPO-205ENST00000522122 TAAR2Q9P1P5 351 aa12.82□□□□□ -0.36
SYNPO-205ENST00000522122 B4GALT7Q9UBV7 327 aa12.82□□□□□ -0.36
SYNPO-205ENST00000522122 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.82□□□□□ -0.36
SYNPO-205ENST00000522122 TMEM72A0PK05 275 aa12.82□□□□□ -0.36
SYNPO-205ENST00000522122 GDNFP39905 211 aa12.82□□□□□ -0.36
SYNPO-205ENST00000522122 WNT3P56703 355 aa12.82□□□□□ -0.36
SYNPO-205ENST00000522122 MALLQ13021 153 aa12.82□□□□□ -0.36
SYNPO-205ENST00000522122 ERV3-1Q14264 604 aa12.82□□□□□ -0.36
SYNPO-205ENST00000522122 GDF7Q7Z4P5 450 aa12.82□□□□□ -0.36
SYNPO-205ENST00000522122 SLC16A11Q8NCK7 471 aa12.82□□□□□ -0.36
SYNPO-205ENST00000522122 NPRL2Q8WTW4 380 aa12.82□□□□□ -0.36
SYNPO-205ENST00000522122 ZBTB8AQ96BR9 441 aa12.82□□□□□ -0.36
SYNPO-205ENST00000522122 RALGAPA2Q2PPJ7 1873 aa12.81□□□□□ -0.36
SYNPO-205ENST00000522122 PIGBOS1A0A0B4J2F0 54 aa12.81□□□□□ -0.36
SYNPO-205ENST00000522122 TMEM269A0A1B0GVZ9 245 aa12.81□□□□□ -0.36
SYNPO-205ENST00000522122 HTR3BO95264 441 aa12.81□□□□□ -0.36
SYNPO-205ENST00000522122 SERPINA5P05154 406 aa12.81□□□□□ -0.36
SYNPO-205ENST00000522122 EMP2P54851 167 aa12.81□□□□□ -0.36
SYNPO-205ENST00000522122 PPA1Q15181 289 aa12.81□□□□□ -0.36
SYNPO-205ENST00000522122 UBE2NLQ5JXB2 153 aa12.81□□□□□ -0.36
SYNPO-205ENST00000522122 TIGD3Q6B0B8 471 aa12.81□□□□□ -0.36
SYNPO-205ENST00000522122 RBM45Q8IUH3 476 aaKnown RBP12.81□□□□□ -0.36
SYNPO-205ENST00000522122 GLB1L2Q8IW92 636 aa12.81□□□□□ -0.36
SYNPO-205ENST00000522122 OR6V1Q8N148 313 aa12.81□□□□□ -0.36
SYNPO-205ENST00000522122 TOMM40LQ969M1 308 aa12.81□□□□□ -0.36
SYNPO-205ENST00000522122 VRK1Q99986 396 aaPredicted RBP12.81□□□□□ -0.36
SYNPO-205ENST00000522122 CRB3Q9BUF7 120 aa12.81□□□□□ -0.36
SYNPO-205ENST00000522122 ALG12Q9BV10 488 aa12.81□□□□□ -0.36
SYNPO-205ENST00000522122 TMEM168Q9H0V1 697 aa12.81□□□□□ -0.36
SYNPO-205ENST00000522122 ZBP1Q9H171 429 aa12.81□□□□□ -0.36
SYNPO-205ENST00000522122 ZNF160Q9HCG1 818 aa12.81□□□□□ -0.36
SYNPO-205ENST00000522122 ISYNA1Q9NPH2 558 aa12.81□□□□□ -0.36
SYNPO-205ENST00000522122 PRDM9Q9NQV7 894 aa12.81□□□□□ -0.36
SYNPO-205ENST00000522122 BOLA1Q9Y3E2 137 aa12.81□□□□□ -0.36
SYNPO-205ENST00000522122 SLC22A7Q9Y694 548 aa12.81□□□□□ -0.36
SYNPO-205ENST00000522122 A0A0A6YYH2 397 aa12.81□□□□□ -0.36
SYNPO-205ENST00000522122 BLACEA4D250 179 aa12.81□□□□□ -0.36
SYNPO-205ENST00000522122 A6NJ64 397 aa12.81□□□□□ -0.36
SYNPO-205ENST00000522122 F5H5K5 113 aa12.81□□□□□ -0.36
SYNPO-205ENST00000522122 H3BUI4 141 aa12.81□□□□□ -0.36
SYNPO-205ENST00000522122 HOXC11O43248 304 aaPredicted RBP12.81□□□□□ -0.36
SYNPO-205ENST00000522122 P04436 131 aa12.81□□□□□ -0.36
SYNPO-205ENST00000522122 HBQ1P09105 142 aa12.81□□□□□ -0.36
SYNPO-205ENST00000522122 TEAD1P28347 426 aa12.81□□□□□ -0.36
SYNPO-205ENST00000522122 PER3P56645 1201 aa12.81□□□□□ -0.36
SYNPO-205ENST00000522122 RAB38P57729 211 aa12.81□□□□□ -0.36
SYNPO-205ENST00000522122 SYT14P1Q58G82 188 aa12.81□□□□□ -0.36
SYNPO-205ENST00000522122 ZNF595Q8IYB9 648 aa12.81□□□□□ -0.36
SYNPO-205ENST00000522122 FAM26EQ8N5C1 309 aa12.81□□□□□ -0.36
SYNPO-205ENST00000522122 OR5H6Q8NGV6 325 aa12.81□□□□□ -0.36
SYNPO-205ENST00000522122 TMEM255BQ8WV15 326 aa12.81□□□□□ -0.36
SYNPO-205ENST00000522122 TM9SF4Q92544 642 aa12.81□□□□□ -0.36
SYNPO-205ENST00000522122 OR5B2Q96R09 309 aa12.81□□□□□ -0.36
SYNPO-205ENST00000522122 KCNS2Q9ULS6 477 aa12.81□□□□□ -0.36
SYNPO-205ENST00000522122 A0A1B0GWA3 101 aa12.81□□□□□ -0.36
SYNPO-205ENST00000522122 ETV5P41161 510 aa12.81□□□□□ -0.36
SYNPO-205ENST00000522122 ETV1P50549 477 aa12.81□□□□□ -0.36
SYNPO-205ENST00000522122 RACK1P63244 317 aaKnown RBP12.81□□□□□ -0.36
SYNPO-205ENST00000522122 PRICKLE2Q7Z3G6 844 aa12.81□□□□□ -0.36
SYNPO-205ENST00000522122 SGPP2Q8IWX5 399 aa12.81□□□□□ -0.36
SYNPO-205ENST00000522122 TOE1Q96GM8 510 aaKnown RBP12.81□□□□□ -0.36
SYNPO-205ENST00000522122 MED18Q9BUE0 208 aa12.81□□□□□ -0.36
SYNPO-205ENST00000522122 SRRQ9GZT4 340 aa12.81□□□□□ -0.36
SYNPO-205ENST00000522122 NRIP3Q9NQ35 241 aa12.81□□□□□ -0.36
SYNPO-205ENST00000522122 CA5BQ9Y2D0 317 aa12.81□□□□□ -0.36
SYNPO-205ENST00000522122 A0A0G2JMZ2 1700 aa12.81□□□□□ -0.36
SYNPO-205ENST00000522122 LRRC37A2A6NM11 1700 aa12.81□□□□□ -0.36
SYNPO-205ENST00000522122 ZNF264O43296 627 aa12.81□□□□□ -0.36
SYNPO-205ENST00000522122 B4GALT3O60512 393 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms