RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 COMTD1Q86VU5 262 aa15.04■□□□□ -0
USP42-207ENST00000521713 BPHLQ86WA6 291 aaPredicted RBP15.04■□□□□ -0
USP42-207ENST00000521713 VRK2Q86Y07 508 aa15.04■□□□□ -0
USP42-207ENST00000521713 DTX3Q8N9I9 347 aa15.04■□□□□ -0
USP42-207ENST00000521713 TM4SF18Q96CE8 201 aa15.04■□□□□ -0
USP42-207ENST00000521713 GFYI3L273 518 aa15.03■□□□□ -0
USP42-207ENST00000521713 CD79AP11912 226 aa15.03■□□□□ -0
USP42-207ENST00000521713 CCSMST1Q4G0I0 132 aa15.03■□□□□ -0
USP42-207ENST00000521713 RNF113BQ8IZP6 322 aaKnown RBP15.03■□□□□ -0
USP42-207ENST00000521713 CYB561A3Q8NBI2 242 aa15.03■□□□□ -0
USP42-207ENST00000521713 GGHQ92820 318 aa15.03■□□□□ -0
USP42-207ENST00000521713 CPPED1Q9BRF8 314 aaPredicted RBP15.03■□□□□ -0
USP42-207ENST00000521713 ATG4BQ9Y4P1 393 aa15.03■□□□□ -0
USP42-207ENST00000521713 UBR3Q6ZT12 1888 aa15.03■□□□□ -0
USP42-207ENST00000521713 TRAV18A0A075B6X5 111 aa15.03■□□□□ -0
USP42-207ENST00000521713 LOC102725191A0A1B0GVB3 256 aa15.03■□□□□ -0
USP42-207ENST00000521713 METTL12A8MUP2 240 aa15.03■□□□□ -0
USP42-207ENST00000521713 SYT7O43581 403 aa15.03■□□□□ -0
USP42-207ENST00000521713 RAB40ALP0C0E4 278 aa15.03■□□□□ -0
USP42-207ENST00000521713 TRIM23P36406 574 aa15.03■□□□□ -0
USP42-207ENST00000521713 HES5Q5TA89 166 aa15.03■□□□□ -0
USP42-207ENST00000521713 OR5H2Q8NGV7 314 aa15.03■□□□□ -0
USP42-207ENST00000521713 OR5AK2Q8NH90 309 aa15.03■□□□□ -0
USP42-207ENST00000521713 IFI44Q8TCB0 444 aa15.03■□□□□ -0
USP42-207ENST00000521713 RAB40AQ8WXH6 277 aa15.03■□□□□ -0
USP42-207ENST00000521713 DCBLD2Q96PD2 775 aa15.03■□□□□ -0
USP42-207ENST00000521713 ZNF160Q9HCG1 818 aa15.03■□□□□ -0
USP42-207ENST00000521713 CNTRLQ7Z7A1 2325 aa15.03■□□□□ -0
USP42-207ENST00000521713 YY2O15391 372 aa15.03■□□□□ -0
USP42-207ENST00000521713 TAPBPO15533 448 aa15.03■□□□□ -0
USP42-207ENST00000521713 ARNTP27540 789 aa15.03■□□□□ -0
USP42-207ENST00000521713 PCBD1P61457 104 aa15.03■□□□□ -0
USP42-207ENST00000521713 OPCMLQ14982 345 aa15.03■□□□□ -0
USP42-207ENST00000521713 MRPL2Q5T653 305 aaKnown RBP15.03■□□□□ -0
USP42-207ENST00000521713 C18orf63Q68DL7 685 aa15.03■□□□□ -0
USP42-207ENST00000521713 PKMYT1Q99640 499 aa15.03■□□□□ -0
USP42-207ENST00000521713 ZNF701Q9NV72 531 aaPredicted RBP15.03■□□□□ -0
USP42-207ENST00000521713 YBX2Q9Y2T7 364 aaKnown RBP15.03■□□□□ -0
USP42-207ENST00000521713 IGHG1P01857 330 aa15.03■□□□□ -0
USP42-207ENST00000521713 LYSMD2Q8IV50 215 aa15.03■□□□□ -0
USP42-207ENST00000521713 SLC35F2Q8IXU6 374 aa15.03■□□□□ -0
USP42-207ENST00000521713 LRRC56Q8IYG6 542 aaPredicted RBP15.03■□□□□ -0
USP42-207ENST00000521713 IP6K3Q96PC2 410 aa15.03■□□□□ -0
USP42-207ENST00000521713 NOX3Q9HBY0 568 aa15.03■□□□□ -0
USP42-207ENST00000521713 SERINC4A6NH21 518 aa15.02■□□□□ -0
USP42-207ENST00000521713 PEX14O75381 377 aa15.02■□□□□ -0
USP42-207ENST00000521713 AQP2P41181 271 aa15.02■□□□□ -0
USP42-207ENST00000521713 PPP2CBP62714 309 aa15.02■□□□□ -0
USP42-207ENST00000521713 PPP2CAP67775 309 aa15.02■□□□□ -0
USP42-207ENST00000521713 DYRK1AQ13627 763 aa15.02■□□□□ -0
USP42-207ENST00000521713 EIF2B1Q14232 305 aaKnown RBP15.02■□□□□ -0
USP42-207ENST00000521713 MLC1Q15049 377 aa15.02■□□□□ -0
USP42-207ENST00000521713 SYT6Q5T7P8 510 aaPredicted RBP15.02■□□□□ -0
USP42-207ENST00000521713 MRPL21Q7Z2W9 205 aaKnown RBP15.02■□□□□ -0
USP42-207ENST00000521713 OR51L1Q8NGJ5 315 aa15.02■□□□□ -0
USP42-207ENST00000521713 CHTF18Q8WVB6 975 aa15.02■□□□□ -0
USP42-207ENST00000521713 OR14A2Q96R54 314 aa15.02■□□□□ -0
USP42-207ENST00000521713 CTRCQ99895 268 aa15.02■□□□□ -0
USP42-207ENST00000521713 OR52D1Q9H346 318 aa15.02■□□□□ -0
USP42-207ENST00000521713 PLEK2Q9NYT0 353 aa15.02■□□□□ -0
USP42-207ENST00000521713 LRFN1Q9P244 771 aa15.02■□□□□ -0
USP42-207ENST00000521713 TMEM265A0A087WTH1 108 aa15.02■□□□□ -0
USP42-207ENST00000521713 CTDSP2O14595 271 aa15.02■□□□□ -0
USP42-207ENST00000521713 NUPL2O15504 423 aaKnown RBP15.02■□□□□ -0
USP42-207ENST00000521713 GIFP27352 417 aa15.02■□□□□ -0
USP42-207ENST00000521713 PIP5KL1Q5T9C9 394 aa15.02■□□□□ -0
USP42-207ENST00000521713 RSC1A1Q92681 617 aa15.02■□□□□ -0
USP42-207ENST00000521713 INTS14Q96SY0 518 aa15.02■□□□□ -0
USP42-207ENST00000521713 CAMK2AQ9UQM7 478 aa15.02■□□□□ -0
USP42-207ENST00000521713 SMIM18P0DKX4 95 aa15.02□□□□□ -0.01
USP42-207ENST00000521713 HOXC5Q00444 222 aa15.02□□□□□ -0.01
USP42-207ENST00000521713 MAP4K2Q12851 820 aa15.02□□□□□ -0.01
USP42-207ENST00000521713 GRAMD2AQ8IUY3 354 aa15.02□□□□□ -0.01
USP42-207ENST00000521713 CCDC71LQ8N9Z2 235 aa15.02□□□□□ -0.01
USP42-207ENST00000521713 AMDHD1Q96NU7 426 aa15.02□□□□□ -0.01
USP42-207ENST00000521713 TMEM9BQ9NQ34 198 aa15.02□□□□□ -0.01
USP42-207ENST00000521713 GPR160Q9UJ42 338 aa15.02□□□□□ -0.01
USP42-207ENST00000521713 FAM230AA0A1W2PPH8 454 aa15.02□□□□□ -0.01
USP42-207ENST00000521713 HPGDSO60760 199 aa15.02□□□□□ -0.01
USP42-207ENST00000521713 DMWDQ09019 674 aa15.02□□□□□ -0.01
USP42-207ENST00000521713 FAM205BPQ63HN1 556 aa15.02□□□□□ -0.01
USP42-207ENST00000521713 SLC46A3Q7Z3Q1 461 aa15.02□□□□□ -0.01
USP42-207ENST00000521713 LILRA2Q8N149 483 aa15.02□□□□□ -0.01
USP42-207ENST00000521713 CNEP1R1Q8N9A8 125 aa15.02□□□□□ -0.01
USP42-207ENST00000521713 PPP1R35Q8TAP8 253 aa15.02□□□□□ -0.01
USP42-207ENST00000521713 RBPMSQ93062 196 aaKnown RBP15.02□□□□□ -0.01
USP42-207ENST00000521713 ZMYND19Q96E35 227 aaPredicted RBP15.02□□□□□ -0.01
USP42-207ENST00000521713 OR6C65A6NJZ3 312 aa15.01□□□□□ -0.01
USP42-207ENST00000521713 TP53P04637 393 aaPredicted RBP15.01□□□□□ -0.01
USP42-207ENST00000521713 BDKRB2P30411 391 aa15.01□□□□□ -0.01
USP42-207ENST00000521713 OR5M10Q6IEU7 315 aa15.01□□□□□ -0.01
USP42-207ENST00000521713 C6orf15Q6UXA7 325 aaPredicted RBP15.01□□□□□ -0.01
USP42-207ENST00000521713 POC1BQ8TC44 478 aa15.01□□□□□ -0.01
USP42-207ENST00000521713 ZNF442Q9H7R0 627 aa15.01□□□□□ -0.01
USP42-207ENST00000521713 KLRC4-KLRK1H3BQV0 150 aa15.01□□□□□ -0.01
USP42-207ENST00000521713 GAPDHSO14556 408 aaPredicted RBP15.01□□□□□ -0.01
USP42-207ENST00000521713 FZD6O60353 706 aa15.01□□□□□ -0.01
USP42-207ENST00000521713 ATG12O94817 140 aa15.01□□□□□ -0.01
USP42-207ENST00000521713 WDPCPO95876 746 aa15.01□□□□□ -0.01
USP42-207ENST00000521713 ZNF16P17020 682 aaPredicted RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms