RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 RNF175Q8N4F7 328 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 GBGT1Q8N5D6 347 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 C1orf52Q8N6N3 182 aaKnown RBP2.86□□□□□ -1.95
VPS13B-209ENST00000521559 ZNF781Q8N8C0 355 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 AMER3Q8N944 861 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 ACOT4Q8N9L9 421 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 OR9A4Q8NGU2 314 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 CT55Q8WUE5 264 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 TWIST2Q8WVJ9 160 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.86□□□□□ -1.95
VPS13B-209ENST00000521559 DYDC1Q8WWB3 177 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 MR1Q95460 341 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 PPP3R2Q96LZ3 170 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 C10orf90Q96M02 699 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 MAGEB18Q96M61 343 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 DACH2Q96NX9 599 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 KCNA7Q96RP8 456 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 DDOQ99489 341 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 SORT1Q99523 831 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 CCT7Q99832 543 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 CENPKQ9BS16 269 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 TBCDQ9BTW9 1192 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 ACPTQ9BZG2 426 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 SHCBP1LQ9BZQ2 653 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 RTN4RQ9BZR6 473 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 ROGDIQ9GZN7 287 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 AICDAQ9GZX7 198 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 OR51B5Q9H339 312 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 TUBB1Q9H4B7 451 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 AKIRIN1Q9H9L7 192 aaPredicted RBP2.86□□□□□ -1.95
VPS13B-209ENST00000521559 GPN2Q9H9Y4 310 aaPredicted RBP2.86□□□□□ -1.95
VPS13B-209ENST00000521559 ANKHQ9HCJ1 492 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 LYRM4Q9HD34 91 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 CHMP1AQ9HD42 196 aaPredicted RBP2.86□□□□□ -1.95
VPS13B-209ENST00000521559 SLC52A3Q9NQ40 469 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 LHX9Q9NQ69 397 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 PFDN4Q9NQP4 134 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.86□□□□□ -1.95
VPS13B-209ENST00000521559 FARSBQ9NSD9 589 aaKnown RBP2.86□□□□□ -1.95
VPS13B-209ENST00000521559 AHSPQ9NZD4 102 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 TRPC4Q9UBN4 977 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 VPS29Q9UBQ0 182 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 ACAD8Q9UKU7 415 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 FARSAQ9Y285 508 aaKnown RBP2.86□□□□□ -1.95
VPS13B-209ENST00000521559 WBP11Q9Y2W2 641 aaKnown RBP2.86□□□□□ -1.95
VPS13B-209ENST00000521559 NAALAD2Q9Y3Q0 740 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 CCL27Q9Y4X3 112 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 DNAJC15Q9Y5T4 150 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 LRRK1Q38SD2 2015 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 A0A0C4DFX4 3053 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 MUC3AQ02505 3323 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 MYLKQ15746 1914 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 PLXNB3Q9ULL4 1909 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 KNL1Q8NG31 2342 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 DOCK9Q9BZ29 2069 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 A0A0G2JN53 185 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 LOC101059948A0A1B0GTJ6 334 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 ZNF860A6NHJ4 632 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 TRPC5OSA6NMA1 111 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 TCP11X1B4DZS4 312 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 C4orf51C9J302 202 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 SAP18O00422 153 aaKnown RBP2.85□□□□□ -1.95
VPS13B-209ENST00000521559 RTCAO00442 366 aaKnown RBP2.85□□□□□ -1.95
VPS13B-209ENST00000521559 CLDN4O14493 209 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 PLPP1O14494 284 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 ZNF195O14628 629 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 ADAMDEC1O15204 470 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 HDAC3O15379 428 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 RRP8O43159 456 aaKnown RBP2.85□□□□□ -1.95
VPS13B-209ENST00000521559 ADAM20O43506 726 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 B4GALT2O60909 372 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 CTNSO60931 367 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 SH3BGRLO75368 114 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 SEC22BO75396 215 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 RDH16O75452 317 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 EEDO75530 441 aaKnown RBP2.85□□□□□ -1.95
VPS13B-209ENST00000521559 KLF7O75840 302 aaPredicted RBP2.85□□□□□ -1.95
VPS13B-209ENST00000521559 RSL1D1O76021 490 aaKnown RBP2.85□□□□□ -1.95
VPS13B-209ENST00000521559 MYO1DO94832 1006 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 BMP10O95393 424 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 TGDSO95455 350 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 IGHEP01854 428 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 FAM58BPP0C7Q3 252 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 RNH1P13489 461 aaKnown RBP2.85□□□□□ -1.95
VPS13B-209ENST00000521559 LIFP15018 202 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 TCN2P20062 427 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 HIST1H1TP22492 207 aaPredicted RBP2.85□□□□□ -1.95
VPS13B-209ENST00000521559 F8A1P23610 371 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 PTPN4P29074 926 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 TLX1P31314 330 aaPredicted RBP2.85□□□□□ -1.95
VPS13B-209ENST00000521559 DLSTP36957 453 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 SSR2P43308 183 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 MAPK12P53778 367 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 PNLIPRP2P54317 469 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 EMP2P54851 167 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 LIM2P55344 173 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 RAB38P57729 211 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 CD81P60033 236 aa2.85□□□□□ -1.95
VPS13B-209ENST00000521559 SNRPEP62304 92 aaKnown RBP2.85□□□□□ -1.95
VPS13B-209ENST00000521559 RPS15P62841 145 aaKnown RBP2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms