RNA–Protein interactions for RNA: ENST00000521425.5

TRAM1-205, Transcript of translocation associated membrane protein 1, humanhuman

TSL 2 BASIC

Gene TRAM1, Length 3,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-205ENST00000521425 COPS3Q9UNS2 423 aa16.06■□□□□ 0.16
TRAM1-205ENST00000521425 CXorf51AA0A1B0GTR3 108 aa16.05■□□□□ 0.16
TRAM1-205ENST00000521425 CPED1A4D0V7 1026 aa16.05■□□□□ 0.16
TRAM1-205ENST00000521425 NGFRP08138 427 aa16.05■□□□□ 0.16
TRAM1-205ENST00000521425 LTBRP36941 435 aa16.05■□□□□ 0.16
TRAM1-205ENST00000521425 TUSC1Q2TAM9 212 aa16.05■□□□□ 0.16
TRAM1-205ENST00000521425 LCN1P1Q5VSP4 162 aa16.05■□□□□ 0.16
TRAM1-205ENST00000521425 B3GAT2Q9NPZ5 323 aa16.05■□□□□ 0.16
TRAM1-205ENST00000521425 PLEKHB1Q9UF11 243 aaPredicted RBP16.05■□□□□ 0.16
TRAM1-205ENST00000521425 LSM2Q9Y333 95 aaKnown RBP16.05■□□□□ 0.16
TRAM1-205ENST00000521425 CDH10Q9Y6N8 788 aa16.05■□□□□ 0.16
TRAM1-205ENST00000521425 MCIDASD6RGH6 385 aa16.05■□□□□ 0.16
TRAM1-205ENST00000521425 APEHP13798 732 aaKnown RBP16.05■□□□□ 0.16
TRAM1-205ENST00000521425 AQP2P41181 271 aa16.05■□□□□ 0.16
TRAM1-205ENST00000521425 MAP2K3P46734 347 aa16.05■□□□□ 0.16
TRAM1-205ENST00000521425 HTR4Q13639 388 aa16.05■□□□□ 0.16
TRAM1-205ENST00000521425 CA13Q8N1Q1 262 aa16.05■□□□□ 0.16
TRAM1-205ENST00000521425 PIGUQ9H490 435 aa16.05■□□□□ 0.16
TRAM1-205ENST00000521425 FKRPQ9H9S5 495 aa16.05■□□□□ 0.16
TRAM1-205ENST00000521425 BCL2L10Q9HD36 194 aa16.05■□□□□ 0.16
TRAM1-205ENST00000521425 IGHV5-51A0A0C4DH38 117 aa16.04■□□□□ 0.16
TRAM1-205ENST00000521425 TGFBR3LH3BV60 316 aa16.04■□□□□ 0.16
TRAM1-205ENST00000521425 HCRTR2O43614 444 aa16.04■□□□□ 0.16
TRAM1-205ENST00000521425 GALR3O60755 368 aaPredicted RBP16.04■□□□□ 0.16
TRAM1-205ENST00000521425 NUP62P37198 522 aaPredicted RBP16.04■□□□□ 0.16
TRAM1-205ENST00000521425 TNFRSF4P43489 277 aa16.04■□□□□ 0.16
TRAM1-205ENST00000521425 RAB40BQ12829 278 aa16.04■□□□□ 0.16
TRAM1-205ENST00000521425 EXOSC2Q13868 293 aaKnown RBP16.04■□□□□ 0.16
TRAM1-205ENST00000521425 FCN2Q15485 313 aa16.04■□□□□ 0.16
TRAM1-205ENST00000521425 MEDAGQ5VYS4 303 aa16.04■□□□□ 0.16
TRAM1-205ENST00000521425 CDRT4Q8N9R6 151 aa16.04■□□□□ 0.16
TRAM1-205ENST00000521425 OR6M1Q8NGM8 313 aa16.04■□□□□ 0.16
TRAM1-205ENST00000521425 OR5W2Q8NH69 310 aa16.04■□□□□ 0.16
TRAM1-205ENST00000521425 BAHD1Q8TBE0 780 aaPredicted RBP16.04■□□□□ 0.16
TRAM1-205ENST00000521425 SMPDL3BQ92485 455 aa16.04■□□□□ 0.16
TRAM1-205ENST00000521425 RBPMSQ93062 196 aaKnown RBP16.04■□□□□ 0.16
TRAM1-205ENST00000521425 TEAD3Q99594 435 aa16.04■□□□□ 0.16
TRAM1-205ENST00000521425 PCDHB16Q9NRJ7 776 aa16.04■□□□□ 0.16
TRAM1-205ENST00000521425 ASB6Q9NWX5 421 aa16.04■□□□□ 0.16
TRAM1-205ENST00000521425 PILRAQ9UKJ1 303 aa16.04■□□□□ 0.16
TRAM1-205ENST00000521425 A0A075B6Q4 140 aa16.04■□□□□ 0.16
TRAM1-205ENST00000521425 A0A0J9YY10 115 aa16.04■□□□□ 0.16
TRAM1-205ENST00000521425 KDM4BO94953 1096 aa16.04■□□□□ 0.16
TRAM1-205ENST00000521425 HLA-DPB1P04440 258 aa16.04■□□□□ 0.16
TRAM1-205ENST00000521425 CAPZA2P47755 286 aa16.04■□□□□ 0.16
TRAM1-205ENST00000521425 TRA2BP62995 288 aaKnown RBP16.04■□□□□ 0.16
TRAM1-205ENST00000521425 C16orf52Q8NHV5 167 aa16.04■□□□□ 0.16
TRAM1-205ENST00000521425 SETD6Q8TBK2 473 aa16.04■□□□□ 0.16
TRAM1-205ENST00000521425 GHSRQ92847 366 aa16.04■□□□□ 0.16
TRAM1-205ENST00000521425 Q96M85 177 aa16.04■□□□□ 0.16
TRAM1-205ENST00000521425 GTPBP2Q9BX10 602 aaKnown RBP16.04■□□□□ 0.16
TRAM1-205ENST00000521425 SRRQ9GZT4 340 aa16.04■□□□□ 0.16
TRAM1-205ENST00000521425 GHITMQ9H3K2 345 aa16.04■□□□□ 0.16
TRAM1-205ENST00000521425 TMEM185BQ9H7F4 350 aa16.04■□□□□ 0.16
TRAM1-205ENST00000521425 ZSCAN32Q9NX65 697 aa16.04■□□□□ 0.16
TRAM1-205ENST00000521425 MEIS3P1A6NDR6 274 aa16.04■□□□□ 0.16
TRAM1-205ENST00000521425 C17orf105B2RV13 164 aa16.04■□□□□ 0.16
TRAM1-205ENST00000521425 IGHV4-34P06331 123 aa16.04■□□□□ 0.16
TRAM1-205ENST00000521425 NID1P14543 1247 aa16.04■□□□□ 0.16
TRAM1-205ENST00000521425 OR1D5P58170 312 aa16.04■□□□□ 0.16
TRAM1-205ENST00000521425 FZD2Q14332 565 aa16.04■□□□□ 0.16
TRAM1-205ENST00000521425 NDUFA9Q16795 377 aa16.04■□□□□ 0.16
TRAM1-205ENST00000521425 PLK5Q496M5 336 aa16.04■□□□□ 0.16
TRAM1-205ENST00000521425 C1QL3Q5VWW1 255 aa16.04■□□□□ 0.16
TRAM1-205ENST00000521425 TCTE3Q8IZS6 198 aa16.04■□□□□ 0.16
TRAM1-205ENST00000521425 DNAAF1Q8NEP3 725 aa16.04■□□□□ 0.16
TRAM1-205ENST00000521425 ZNRF4Q8WWF5 429 aa16.04■□□□□ 0.16
TRAM1-205ENST00000521425 SLC25A46Q96AG3 418 aa16.04■□□□□ 0.16
TRAM1-205ENST00000521425 HYLS1Q96M11 299 aa16.04■□□□□ 0.16
TRAM1-205ENST00000521425 NIPAL2Q9H841 368 aa16.04■□□□□ 0.16
TRAM1-205ENST00000521425 V9GYH0 126 aa16.04■□□□□ 0.16
TRAM1-205ENST00000521425 RHPN2P1A8MT19 583 aa16.03■□□□□ 0.16
TRAM1-205ENST00000521425 ZNF254O75437 659 aa16.03■□□□□ 0.16
TRAM1-205ENST00000521425 APOC3P02656 99 aa16.03■□□□□ 0.16
TRAM1-205ENST00000521425 EDNRAP25101 427 aa16.03■□□□□ 0.16
TRAM1-205ENST00000521425 FXYD6P3P58550 94 aa16.03■□□□□ 0.16
TRAM1-205ENST00000521425 POLR2GP62487 172 aaKnown RBP eCLIP16.03■□□□□ 0.16
TRAM1-205ENST00000521425 PSG6Q00889 435 aa16.03■□□□□ 0.16
TRAM1-205ENST00000521425 FAAP20Q6NZ36 180 aa16.03■□□□□ 0.16
TRAM1-205ENST00000521425 TMPRSS9Q7Z410 1059 aa16.03■□□□□ 0.16
TRAM1-205ENST00000521425 OR4D9Q8NGE8 314 aa16.03■□□□□ 0.16
TRAM1-205ENST00000521425 OR14A2Q96R54 314 aa16.03■□□□□ 0.16
TRAM1-205ENST00000521425 DPYSL5Q9BPU6 564 aa16.03■□□□□ 0.16
TRAM1-205ENST00000521425 LRRC61Q9BV99 259 aa16.03■□□□□ 0.16
TRAM1-205ENST00000521425 MED28Q9H204 178 aa16.03■□□□□ 0.16
TRAM1-205ENST00000521425 RAB19A4D1S5 217 aa16.03■□□□□ 0.16
TRAM1-205ENST00000521425 INMT-MINDY4F8WBC2 141 aa16.03■□□□□ 0.16
TRAM1-205ENST00000521425 CLDN4O14493 209 aa16.03■□□□□ 0.16
TRAM1-205ENST00000521425 CBX7O95931 251 aa16.03■□□□□ 0.16
TRAM1-205ENST00000521425 DBIP07108 87 aaKnown RBP16.03■□□□□ 0.16
TRAM1-205ENST00000521425 EIF1AXP47813 144 aaKnown RBP16.03■□□□□ 0.16
TRAM1-205ENST00000521425 ZNF322Q6U7Q0 402 aaPredicted RBP16.03■□□□□ 0.16
TRAM1-205ENST00000521425 RTL4Q6ZR62 310 aa16.03■□□□□ 0.16
TRAM1-205ENST00000521425 SLC35D2Q76EJ3 337 aa16.03■□□□□ 0.16
TRAM1-205ENST00000521425 RTL10Q7L3V2 364 aa16.03■□□□□ 0.16
TRAM1-205ENST00000521425 HDDC2Q7Z4H3 204 aa16.03■□□□□ 0.16
TRAM1-205ENST00000521425 C9orf62Q8N4C0 152 aa16.03■□□□□ 0.16
TRAM1-205ENST00000521425 ZNF416Q9BWM5 594 aa16.03■□□□□ 0.16
TRAM1-205ENST00000521425 RANBP3Q9H6Z4 567 aaPredicted RBP16.03■□□□□ 0.16
TRAM1-205ENST00000521425 C19orf53Q9UNZ5 99 aaPredicted RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms