RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 A0A096LNT2 108 aa13.28□□□□□ -0.28
CSMD1-207ENST00000520451 AQP7P3A6NL99 342 aa13.28□□□□□ -0.28
CSMD1-207ENST00000520451 A8MV72 311 aaPredicted RBP13.28□□□□□ -0.28
CSMD1-207ENST00000520451 ATP6V1G2-DDX39BF2Z307 99 aa13.28□□□□□ -0.28
CSMD1-207ENST00000520451 H7C417 338 aa13.28□□□□□ -0.28
CSMD1-207ENST00000520451 SNNO75324 88 aaPredicted RBP13.28□□□□□ -0.28
CSMD1-207ENST00000520451 SLC22A3O75751 556 aa13.28□□□□□ -0.28
CSMD1-207ENST00000520451 ANP32DO95626 131 aa13.28□□□□□ -0.28
CSMD1-207ENST00000520451 WNT11O96014 354 aa13.28□□□□□ -0.28
CSMD1-207ENST00000520451 IL6P05231 212 aa13.28□□□□□ -0.28
CSMD1-207ENST00000520451 BCHEP06276 602 aa13.28□□□□□ -0.28
CSMD1-207ENST00000520451 IDO1P14902 403 aa13.28□□□□□ -0.28
CSMD1-207ENST00000520451 ACAA2P42765 397 aaKnown RBP13.28□□□□□ -0.28
CSMD1-207ENST00000520451 MVDP53602 400 aa13.28□□□□□ -0.28
CSMD1-207ENST00000520451 CRISP3P54108 245 aa13.28□□□□□ -0.28
CSMD1-207ENST00000520451 WDR4P57081 412 aaKnown RBP13.28□□□□□ -0.28
CSMD1-207ENST00000520451 PRPS1P60891 318 aa13.28□□□□□ -0.28
CSMD1-207ENST00000520451 COPZ1P61923 177 aa13.28□□□□□ -0.28
CSMD1-207ENST00000520451 BNIP2Q12982 314 aa13.28□□□□□ -0.28
CSMD1-207ENST00000520451 PDCD4Q53EL6 469 aaKnown RBP13.28□□□□□ -0.28
CSMD1-207ENST00000520451 WBP2NLQ6ICG8 309 aa13.28□□□□□ -0.28
CSMD1-207ENST00000520451 CROCCP2Q86T23 111 aa13.28□□□□□ -0.28
CSMD1-207ENST00000520451 HIPK1Q86Z02 1210 aa13.28□□□□□ -0.28
CSMD1-207ENST00000520451 ZIC4Q8N9L1 334 aa13.28□□□□□ -0.28
CSMD1-207ENST00000520451 POMGNT2Q8NAT1 580 aa13.28□□□□□ -0.28
CSMD1-207ENST00000520451 SF3B5Q9BWJ5 86 aaKnown RBP13.28□□□□□ -0.28
CSMD1-207ENST00000520451 TAPBPLQ9BX59 468 aa13.28□□□□□ -0.28
CSMD1-207ENST00000520451 ADPRHL2Q9NX46 363 aa13.28□□□□□ -0.28
CSMD1-207ENST00000520451 ZNF443Q9Y2A4 671 aaPredicted RBP13.28□□□□□ -0.28
CSMD1-207ENST00000520451 DSPPQ9NZW4 1301 aa13.28□□□□□ -0.28
CSMD1-207ENST00000520451 RTTNQ86VV8 2226 aa13.27□□□□□ -0.28
CSMD1-207ENST00000520451 CUBNO60494 3623 aa13.27□□□□□ -0.29
CSMD1-207ENST00000520451 TMEM120BA0PK00 339 aa13.27□□□□□ -0.29
CSMD1-207ENST00000520451 A8MVM7 634 aa13.27□□□□□ -0.29
CSMD1-207ENST00000520451 KRT33AO76009 404 aa13.27□□□□□ -0.29
CSMD1-207ENST00000520451 IFNA2P01563 188 aa13.27□□□□□ -0.29
CSMD1-207ENST00000520451 BMP4P12644 408 aa13.27□□□□□ -0.29
CSMD1-207ENST00000520451 NCF2P19878 526 aaPredicted RBP13.27□□□□□ -0.29
CSMD1-207ENST00000520451 DSTNP60981 165 aa13.27□□□□□ -0.29
CSMD1-207ENST00000520451 CHRNB3Q05901 458 aa13.27□□□□□ -0.29
CSMD1-207ENST00000520451 LARS2Q15031 903 aaKnown RBP13.27□□□□□ -0.29
CSMD1-207ENST00000520451 TMEM249Q2WGJ8 235 aa13.27□□□□□ -0.29
CSMD1-207ENST00000520451 HIKESHIQ53FT3 197 aa13.27□□□□□ -0.29
CSMD1-207ENST00000520451 RPS26P11Q5JNZ5 115 aaPredicted RBP13.27□□□□□ -0.29
CSMD1-207ENST00000520451 C6orf52Q5T4I8 152 aa13.27□□□□□ -0.29
CSMD1-207ENST00000520451 RNF220Q5VTB9 566 aa13.27□□□□□ -0.29
CSMD1-207ENST00000520451 ABHD12BQ7Z5M8 362 aaPredicted RBP13.27□□□□□ -0.29
CSMD1-207ENST00000520451 CLIP4Q8N3C7 705 aa13.27□□□□□ -0.29
CSMD1-207ENST00000520451 SLC38A5Q8WUX1 472 aa13.27□□□□□ -0.29
CSMD1-207ENST00000520451 FAM168AQ92567 244 aa13.27□□□□□ -0.29
CSMD1-207ENST00000520451 AURKBQ96GD4 344 aaPredicted RBP13.27□□□□□ -0.29
CSMD1-207ENST00000520451 TNFRSF13CQ96RJ3 184 aa13.27□□□□□ -0.29
CSMD1-207ENST00000520451 MANSC1Q9H8J5 431 aa13.27□□□□□ -0.29
CSMD1-207ENST00000520451 TPT1P8Q9HAU6 139 aa13.27□□□□□ -0.29
CSMD1-207ENST00000520451 CACYBPQ9HB71 228 aaKnown RBP13.27□□□□□ -0.29
CSMD1-207ENST00000520451 RAB21Q9UL25 225 aa13.27□□□□□ -0.29
CSMD1-207ENST00000520451 MOKQ9UQ07 419 aa13.27□□□□□ -0.29
CSMD1-207ENST00000520451 STAB1Q9NY15 2570 aa13.27□□□□□ -0.29
CSMD1-207ENST00000520451 TMEM247A6NEH6 219 aa13.26□□□□□ -0.29
CSMD1-207ENST00000520451 ELOA3DA6NLF2 546 aaPredicted RBP13.26□□□□□ -0.29
CSMD1-207ENST00000520451 SLCO1B7G3V0H7 640 aa13.26□□□□□ -0.29
CSMD1-207ENST00000520451 KLF11O14901 512 aa13.26□□□□□ -0.29
CSMD1-207ENST00000520451 FRS3O43559 492 aa13.26□□□□□ -0.29
CSMD1-207ENST00000520451 TFPTP0C1Z6 253 aa13.26□□□□□ -0.29
CSMD1-207ENST00000520451 ZCCHC18P0CG32 403 aa13.26□□□□□ -0.29
CSMD1-207ENST00000520451 PRG2P13727 222 aa13.26□□□□□ -0.29
CSMD1-207ENST00000520451 SLC25A16P16260 332 aa13.26□□□□□ -0.29
CSMD1-207ENST00000520451 APOBEC3AP31941 199 aaPredicted RBP13.26□□□□□ -0.29
CSMD1-207ENST00000520451 EFNA4P52798 201 aa13.26□□□□□ -0.29
CSMD1-207ENST00000520451 LOXL1Q08397 574 aaPredicted RBP13.26□□□□□ -0.29
CSMD1-207ENST00000520451 ZSWIM7Q19AV6 140 aa13.26□□□□□ -0.29
CSMD1-207ENST00000520451 ELOA3BQ3SY89 546 aa13.26□□□□□ -0.29
CSMD1-207ENST00000520451 CHRFAM7AQ494W8 412 aa13.26□□□□□ -0.29
CSMD1-207ENST00000520451 GTDC1Q4AE62 458 aa13.26□□□□□ -0.29
CSMD1-207ENST00000520451 SLC9B1Q4ZJI4 515 aa13.26□□□□□ -0.29
CSMD1-207ENST00000520451 C1QTNF12Q5T7M4 302 aa13.26□□□□□ -0.29
CSMD1-207ENST00000520451 C1orf140Q5VVS0 124 aa13.26□□□□□ -0.29
CSMD1-207ENST00000520451 ATG16L1Q676U5 607 aa13.26□□□□□ -0.29
CSMD1-207ENST00000520451 TMEM225Q6GV28 225 aa13.26□□□□□ -0.29
CSMD1-207ENST00000520451 PODNL1Q6PEZ8 512 aa13.26□□□□□ -0.29
CSMD1-207ENST00000520451 ELOA3Q8NG57 546 aa13.26□□□□□ -0.29
CSMD1-207ENST00000520451 TMEM19Q96HH6 336 aa13.26□□□□□ -0.29
CSMD1-207ENST00000520451 ITCHQ96J02 903 aa13.26□□□□□ -0.29
CSMD1-207ENST00000520451 REPIN1Q9BWE0 567 aaKnown RBP13.26□□□□□ -0.29
CSMD1-207ENST00000520451 PIF1Q9H611 641 aa13.26□□□□□ -0.29
CSMD1-207ENST00000520451 RMND5AQ9H871 391 aa13.26□□□□□ -0.29
CSMD1-207ENST00000520451 ZIM2Q9NZV7 527 aa13.26□□□□□ -0.29
CSMD1-207ENST00000520451 PRDM4Q9UKN5 801 aa13.26□□□□□ -0.29
CSMD1-207ENST00000520451 ZNF232Q9UNY5 417 aa13.26□□□□□ -0.29
CSMD1-207ENST00000520451 PMF1-BGLAPU3KQ54 211 aa13.26□□□□□ -0.29
CSMD1-207ENST00000520451 RNF212BA8MTL3 300 aa13.25□□□□□ -0.29
CSMD1-207ENST00000520451 ZNF587BE7ETH6 402 aa13.25□□□□□ -0.29
CSMD1-207ENST00000520451 LGI1O95970 557 aa13.25□□□□□ -0.29
CSMD1-207ENST00000520451 CSF3P09919 207 aa13.25□□□□□ -0.29
CSMD1-207ENST00000520451 SELENOPP49908 381 aa13.25□□□□□ -0.29
CSMD1-207ENST00000520451 P2RY4P51582 365 aa13.25□□□□□ -0.29
CSMD1-207ENST00000520451 VLDLRP98155 873 aa13.25□□□□□ -0.29
CSMD1-207ENST00000520451 LGALS3BPQ08380 585 aa13.25□□□□□ -0.29
CSMD1-207ENST00000520451 C6orf10Q5SRN2 563 aa13.25□□□□□ -0.29
CSMD1-207ENST00000520451 PRAMEF8Q5VWM4 474 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms