RNA–Protein interactions for RNA: ENST00000519321.5

SKP1-206, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-206ENST00000519321 AMBRA1Q9C0C7 1298 aa20.15■□□□□ 0.82
SKP1-206ENST00000519321 RIMS3Q9UJD0 308 aa20.15■□□□□ 0.82
SKP1-206ENST00000519321 CLEC4AQ9UMR7 237 aa20.15■□□□□ 0.82
SKP1-206ENST00000519321 INTS1Q8N201 2190 aaKnown RBP20.14■□□□□ 0.81
SKP1-206ENST00000519321 IGKV1D-42A0A075B6H8 117 aa20.14■□□□□ 0.81
SKP1-206ENST00000519321 GPR171O14626 319 aa20.14■□□□□ 0.81
SKP1-206ENST00000519321 VAMP5O95183 116 aa20.14■□□□□ 0.81
SKP1-206ENST00000519321 PEX19P40855 299 aa20.14■□□□□ 0.81
SKP1-206ENST00000519321 TFF3Q07654 80 aa20.14■□□□□ 0.81
SKP1-206ENST00000519321 PIN1Q13526 163 aaPredicted RBP20.14■□□□□ 0.81
SKP1-206ENST00000519321 TRIM25Q14258 630 aaKnown RBP20.14■□□□□ 0.81
SKP1-206ENST00000519321 OTUD3Q5T2D3 398 aaPredicted RBP20.14■□□□□ 0.81
SKP1-206ENST00000519321 VWA1Q6PCB0 445 aa20.14■□□□□ 0.81
SKP1-206ENST00000519321 BTLAQ7Z6A9 289 aa20.14■□□□□ 0.81
SKP1-206ENST00000519321 CYP4Z1Q86W10 505 aa20.14■□□□□ 0.81
SKP1-206ENST00000519321 KTI12Q96EK9 354 aaPredicted RBP20.14■□□□□ 0.81
SKP1-206ENST00000519321 PYURFQ96I23 114 aa20.14■□□□□ 0.81
SKP1-206ENST00000519321 HS6ST2Q96MM7 605 aa20.14■□□□□ 0.81
SKP1-206ENST00000519321 THTPAQ9BU02 230 aa20.14■□□□□ 0.81
SKP1-206ENST00000519321 PTDSS2Q9BVG9 487 aa20.14■□□□□ 0.81
SKP1-206ENST00000519321 IGKV3D-15A0A087WSY6 115 aa20.13■□□□□ 0.81
SKP1-206ENST00000519321 A8MXE2 369 aa20.13■□□□□ 0.81
SKP1-206ENST00000519321 FTCDNL1E5RQL4 147 aa20.13■□□□□ 0.81
SKP1-206ENST00000519321 FZD7O75084 574 aa20.13■□□□□ 0.81
SKP1-206ENST00000519321 SMNDC1O75940 238 aaKnown RBP eCLIP20.13■□□□□ 0.81
SKP1-206ENST00000519321 LYPD3O95274 346 aa20.13■□□□□ 0.81
SKP1-206ENST00000519321 THY1P04216 161 aa20.13■□□□□ 0.81
SKP1-206ENST00000519321 RBM34P42696 430 aaKnown RBP20.13■□□□□ 0.81
SKP1-206ENST00000519321 SLC16A1P53985 500 aa20.13■□□□□ 0.81
SKP1-206ENST00000519321 STK32CQ86UX6 486 aa20.13■□□□□ 0.81
SKP1-206ENST00000519321 TSPYL5Q86VY4 417 aaPredicted RBP20.13■□□□□ 0.81
SKP1-206ENST00000519321 TUSC5Q8IXB3 177 aa20.13■□□□□ 0.81
SKP1-206ENST00000519321 RNASE6Q93091 150 aaKnown RBP20.13■□□□□ 0.81
SKP1-206ENST00000519321 TAAR8Q969N4 342 aa20.13■□□□□ 0.81
SKP1-206ENST00000519321 SLC25A36Q96CQ1 311 aa20.13■□□□□ 0.81
SKP1-206ENST00000519321 SLC7A6OSQ96CW6 309 aaPredicted RBP20.13■□□□□ 0.81
SKP1-206ENST00000519321 ZNF426Q9BUY5 554 aa20.13■□□□□ 0.81
SKP1-206ENST00000519321 SF3B5Q9BWJ5 86 aaKnown RBP20.13■□□□□ 0.81
SKP1-206ENST00000519321 FANCFQ9NPI8 374 aa20.13■□□□□ 0.81
SKP1-206ENST00000519321 PLSCR4Q9NRQ2 329 aa20.13■□□□□ 0.81
SKP1-206ENST00000519321 FAM32AQ9Y421 112 aaKnown RBP20.13■□□□□ 0.81
SKP1-206ENST00000519321 CACNA1CQ13936 2221 aa20.12■□□□□ 0.81
SKP1-206ENST00000519321 AQP7P3A6NL99 342 aa20.12■□□□□ 0.81
SKP1-206ENST00000519321 MT-ATP6P00846 226 aa20.12■□□□□ 0.81
SKP1-206ENST00000519321 CGAP01215 116 aa20.12■□□□□ 0.81
SKP1-206ENST00000519321 ITGA2P17301 1181 aa20.12■□□□□ 0.81
SKP1-206ENST00000519321 TMEM225Q6GV28 225 aa20.12■□□□□ 0.81
SKP1-206ENST00000519321 GALNT5Q7Z7M9 940 aa20.12■□□□□ 0.81
SKP1-206ENST00000519321 LUZP2Q86TE4 346 aa20.12■□□□□ 0.81
SKP1-206ENST00000519321 DHFR2Q86XF0 187 aa20.12■□□□□ 0.81
SKP1-206ENST00000519321 OFCC1Q8IZS5 231 aa20.12■□□□□ 0.81
SKP1-206ENST00000519321 TMEM99Q8N816 258 aa20.12■□□□□ 0.81
SKP1-206ENST00000519321 MCUR1Q96AQ8 359 aa20.12■□□□□ 0.81
SKP1-206ENST00000519321 ASB9Q96DX5 294 aa20.12■□□□□ 0.81
SKP1-206ENST00000519321 PRSS27Q9BQR3 290 aa20.12■□□□□ 0.81
SKP1-206ENST00000519321 FNDC11Q9BVV2 318 aa20.12■□□□□ 0.81
SKP1-206ENST00000519321 KLHL4Q9C0H6 718 aa20.12■□□□□ 0.81
SKP1-206ENST00000519321 C6orf203Q9P0P8 240 aaPredicted RBP20.12■□□□□ 0.81
SKP1-206ENST00000519321 A4GNTQ9UNA3 340 aa20.12■□□□□ 0.81
SKP1-206ENST00000519321 RASD1Q9Y272 281 aa20.12■□□□□ 0.81
SKP1-206ENST00000519321 CORINQ9Y5Q5 1042 aa20.12■□□□□ 0.81
SKP1-206ENST00000519321 ENPP4Q9Y6X5 453 aa20.12■□□□□ 0.81
SKP1-206ENST00000519321 ICE1Q9Y2F5 2266 aa20.11■□□□□ 0.81
SKP1-206ENST00000519321 USP9YO00507 2555 aaPredicted RBP20.11■□□□□ 0.81
SKP1-206ENST00000519321 MPDZO75970 2070 aa20.11■□□□□ 0.81
SKP1-206ENST00000519321 ZNF716A6NP11 495 aa20.11■□□□□ 0.81
SKP1-206ENST00000519321 DNAJC8O75937 253 aaPredicted RBP20.11■□□□□ 0.81
SKP1-206ENST00000519321 PDE5AO76074 875 aa20.11■□□□□ 0.81
SKP1-206ENST00000519321 AKR7A3O95154 331 aa20.11■□□□□ 0.81
SKP1-206ENST00000519321 KLK2P20151 261 aa20.11■□□□□ 0.81
SKP1-206ENST00000519321 PCYT1AP49585 367 aa20.11■□□□□ 0.81
SKP1-206ENST00000519321 SP5Q6BEB4 398 aaPredicted RBP20.11■□□□□ 0.81
SKP1-206ENST00000519321 LCN8Q6JVE9 175 aa20.11■□□□□ 0.81
SKP1-206ENST00000519321 KIF18BQ86Y91 864 aa20.11■□□□□ 0.81
SKP1-206ENST00000519321 CCDC103Q8IW40 242 aa20.11■□□□□ 0.81
SKP1-206ENST00000519321 RBM24Q9BX46 236 aaKnown RBP20.11■□□□□ 0.81
SKP1-206ENST00000519321 SLC24A3Q9HC58 644 aa20.11■□□□□ 0.81
SKP1-206ENST00000519321 ING1Q9UK53 422 aaPredicted RBP20.11■□□□□ 0.81
SKP1-206ENST00000519321 B3GALT5Q9Y2C3 310 aa20.11■□□□□ 0.81
SKP1-206ENST00000519321 SPTAN1Q13813 2472 aaKnown RBP20.1■□□□□ 0.81
SKP1-206ENST00000519321 HTR3EA5X5Y0 456 aa20.1■□□□□ 0.81
SKP1-206ENST00000519321 IGF2P01344 180 aa20.1■□□□□ 0.81
SKP1-206ENST00000519321 GRNP28799 593 aaKnown RBP20.1■□□□□ 0.81
SKP1-206ENST00000519321 UQCRC1P31930 480 aa20.1■□□□□ 0.81
SKP1-206ENST00000519321 TRAP1Q12931 704 aaKnown RBP20.1■□□□□ 0.81
SKP1-206ENST00000519321 WDR88Q6ZMY6 472 aa20.1■□□□□ 0.81
SKP1-206ENST00000519321 P3H2Q8IVL5 708 aa20.1■□□□□ 0.81
SKP1-206ENST00000519321 C10orf53Q8N6V4 93 aa20.1■□□□□ 0.81
SKP1-206ENST00000519321 SCAIQ8N9R8 606 aa20.1■□□□□ 0.81
SKP1-206ENST00000519321 ADPRHL1Q8NDY3 354 aa20.1■□□□□ 0.81
SKP1-206ENST00000519321 SPOCK3Q9BQ16 436 aa20.1■□□□□ 0.81
SKP1-206ENST00000519321 ASPNQ9BXN1 380 aa20.1■□□□□ 0.81
SKP1-206ENST00000519321 TRIM15Q9C019 465 aa20.1■□□□□ 0.81
SKP1-206ENST00000519321 ENKD1Q9H0I2 346 aa20.1■□□□□ 0.81
SKP1-206ENST00000519321 ELOVL5Q9NYP7 299 aa20.1■□□□□ 0.81
SKP1-206ENST00000519321 ZNF814B7Z6K7 855 aa20.09■□□□□ 0.81
SKP1-206ENST00000519321 BGLAPP02818 100 aa20.09■□□□□ 0.81
SKP1-206ENST00000519321 RHCEP18577 417 aa20.09■□□□□ 0.81
SKP1-206ENST00000519321 GRPRP30550 384 aa20.09■□□□□ 0.81
SKP1-206ENST00000519321 YAP1P46937 504 aaKnown RBP20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms