RNA–Protein interactions for RNA: ENST00000516991.1

SCARNA20.5-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 142 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.5-201ENST00000516991 USF1P22415 310 aaPredicted RBP12.77□□□□□ -0.37
SCARNA20.5-201ENST00000516991 GZMKP49863 264 aa12.77□□□□□ -0.37
SCARNA20.5-201ENST00000516991 COPZ1P61923 177 aa12.77□□□□□ -0.37
SCARNA20.5-201ENST00000516991 SNRPD2P62316 118 aaKnown RBP12.77□□□□□ -0.37
SCARNA20.5-201ENST00000516991 STX3Q13277 289 aa12.77□□□□□ -0.37
SCARNA20.5-201ENST00000516991 CEACAM7Q14002 265 aa12.77□□□□□ -0.37
SCARNA20.5-201ENST00000516991 OR7A5Q15622 319 aa12.77□□□□□ -0.37
SCARNA20.5-201ENST00000516991 ZSWIM7Q19AV6 140 aa12.77□□□□□ -0.37
SCARNA20.5-201ENST00000516991 ZNF621Q6ZSS3 439 aa12.77□□□□□ -0.37
SCARNA20.5-201ENST00000516991 GLB1L3Q8NCI6 653 aaPredicted RBP12.77□□□□□ -0.37
SCARNA20.5-201ENST00000516991 TAPBPLQ9BX59 468 aa12.77□□□□□ -0.37
SCARNA20.5-201ENST00000516991 BEX2Q9BXY8 128 aa12.77□□□□□ -0.37
SCARNA20.5-201ENST00000516991 CACYBPQ9HB71 228 aaKnown RBP12.77□□□□□ -0.37
SCARNA20.5-201ENST00000516991 MYOZ1Q9NP98 299 aaPredicted RBP12.77□□□□□ -0.37
SCARNA20.5-201ENST00000516991 A0A096LPI6 279 aa12.76□□□□□ -0.37
SCARNA20.5-201ENST00000516991 CDHR4A6H8M9 788 aa12.76□□□□□ -0.37
SCARNA20.5-201ENST00000516991 ZNF587BE7ETH6 402 aa12.76□□□□□ -0.37
SCARNA20.5-201ENST00000516991 PHF1O43189 567 aaPredicted RBP12.76□□□□□ -0.37
SCARNA20.5-201ENST00000516991 KRT33AO76009 404 aa12.76□□□□□ -0.37
SCARNA20.5-201ENST00000516991 AKR7A3O95154 331 aa12.76□□□□□ -0.37
SCARNA20.5-201ENST00000516991 VAMP5O95183 116 aa12.76□□□□□ -0.37
SCARNA20.5-201ENST00000516991 F12P00748 615 aaPredicted RBP12.76□□□□□ -0.37
SCARNA20.5-201ENST00000516991 ALDOCP09972 364 aaKnown RBP12.76□□□□□ -0.37
SCARNA20.5-201ENST00000516991 IGHV4-31P0DP07 118 aa12.76□□□□□ -0.37
SCARNA20.5-201ENST00000516991 ZNF16P17020 682 aaPredicted RBP12.76□□□□□ -0.37
SCARNA20.5-201ENST00000516991 BGNP21810 368 aa12.76□□□□□ -0.37
SCARNA20.5-201ENST00000516991 CDKN2CP42773 168 aa12.76□□□□□ -0.37
SCARNA20.5-201ENST00000516991 PDLIM4P50479 330 aa12.76□□□□□ -0.37
SCARNA20.5-201ENST00000516991 UFM1P61960 85 aa12.76□□□□□ -0.37
SCARNA20.5-201ENST00000516991 RNF220Q5VTB9 566 aa12.76□□□□□ -0.37
SCARNA20.5-201ENST00000516991 WBP2NLQ6ICG8 309 aa12.76□□□□□ -0.37
SCARNA20.5-201ENST00000516991 TMEM99Q8N816 258 aa12.76□□□□□ -0.37
SCARNA20.5-201ENST00000516991 HTRA1Q92743 480 aa12.76□□□□□ -0.37
SCARNA20.5-201ENST00000516991 TEX37Q96LM6 180 aa12.76□□□□□ -0.37
SCARNA20.5-201ENST00000516991 PIMREGQ9BSJ6 248 aa12.76□□□□□ -0.37
SCARNA20.5-201ENST00000516991 KATNB1Q9BVA0 655 aa12.76□□□□□ -0.37
SCARNA20.5-201ENST00000516991 SHARPINQ9H0F6 387 aa12.76□□□□□ -0.37
SCARNA20.5-201ENST00000516991 TMEM45AQ9NWC5 275 aa12.76□□□□□ -0.37
SCARNA20.5-201ENST00000516991 FBXO9Q9UK97 447 aaPredicted RBP12.76□□□□□ -0.37
SCARNA20.5-201ENST00000516991 MOKQ9UQ07 419 aa12.76□□□□□ -0.37
SCARNA20.5-201ENST00000516991 DSPPQ9NZW4 1301 aa12.76□□□□□ -0.37
SCARNA20.5-201ENST00000516991 TRPC5OSA6NMA1 111 aa12.75□□□□□ -0.37
SCARNA20.5-201ENST00000516991 A8MVM7 634 aa12.75□□□□□ -0.37
SCARNA20.5-201ENST00000516991 SDHDO14521 159 aa12.75□□□□□ -0.37
SCARNA20.5-201ENST00000516991 RFXANKO14593 260 aa12.75□□□□□ -0.37
SCARNA20.5-201ENST00000516991 FRS3O43559 492 aa12.75□□□□□ -0.37
SCARNA20.5-201ENST00000516991 PDE5AO76074 875 aa12.75□□□□□ -0.37
SCARNA20.5-201ENST00000516991 THBS2P35442 1172 aa12.75□□□□□ -0.37
SCARNA20.5-201ENST00000516991 CRISP3P54108 245 aa12.75□□□□□ -0.37
SCARNA20.5-201ENST00000516991 SH3BGRP55822 239 aaPredicted RBP12.75□□□□□ -0.37
SCARNA20.5-201ENST00000516991 NME5P56597 212 aa12.75□□□□□ -0.37
SCARNA20.5-201ENST00000516991 UBE2NP61088 152 aaKnown RBP12.75□□□□□ -0.37
SCARNA20.5-201ENST00000516991 LSM11P83369 360 aaKnown RBP eCLIP12.75□□□□□ -0.37
SCARNA20.5-201ENST00000516991 LARS2Q15031 903 aaKnown RBP12.75□□□□□ -0.37
SCARNA20.5-201ENST00000516991 C3orf36Q3SXR2 165 aa12.75□□□□□ -0.37
SCARNA20.5-201ENST00000516991 COX20Q5RI15 118 aa12.75□□□□□ -0.37
SCARNA20.5-201ENST00000516991 TMEM225Q6GV28 225 aa12.75□□□□□ -0.37
SCARNA20.5-201ENST00000516991 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.75□□□□□ -0.37
SCARNA20.5-201ENST00000516991 GPAT4Q86UL3 456 aa12.75□□□□□ -0.37
SCARNA20.5-201ENST00000516991 ZIC4Q8N9L1 334 aa12.75□□□□□ -0.37
SCARNA20.5-201ENST00000516991 OR52P1PQ8NH57 321 aa12.75□□□□□ -0.37
SCARNA20.5-201ENST00000516991 PNPT1Q8TCS8 783 aaKnown RBP12.75□□□□□ -0.37
SCARNA20.5-201ENST00000516991 NANOS1Q8WY41 292 aaKnown RBP12.75□□□□□ -0.37
SCARNA20.5-201ENST00000516991 FBXO17Q96EF6 278 aa12.75□□□□□ -0.37
SCARNA20.5-201ENST00000516991 ZNF385AQ96PM9 386 aaKnown RBP12.75□□□□□ -0.37
SCARNA20.5-201ENST00000516991 SLC38A2Q96QD8 506 aa12.75□□□□□ -0.37
SCARNA20.5-201ENST00000516991 ARMC7Q9H6L4 198 aa12.75□□□□□ -0.37
SCARNA20.5-201ENST00000516991 PNPOQ9NVS9 261 aa12.75□□□□□ -0.37
SCARNA20.5-201ENST00000516991 THUMPD1Q9NXG2 353 aaKnown RBP12.75□□□□□ -0.37
SCARNA20.5-201ENST00000516991 RASD1Q9Y272 281 aa12.75□□□□□ -0.37
SCARNA20.5-201ENST00000516991 MALRD1Q5VYJ5 2156 aa12.74□□□□□ -0.37
SCARNA20.5-201ENST00000516991 ARPC4-TTLL3A0A0A6YYG9 625 aa12.74□□□□□ -0.37
SCARNA20.5-201ENST00000516991 IGHV1-18A0A0C4DH31 117 aa12.74□□□□□ -0.37
SCARNA20.5-201ENST00000516991 TMEM247A6NEH6 219 aa12.74□□□□□ -0.37
SCARNA20.5-201ENST00000516991 HDAC3O15379 428 aa12.74□□□□□ -0.37
SCARNA20.5-201ENST00000516991 LMX1BO60663 402 aa12.74□□□□□ -0.37
SCARNA20.5-201ENST00000516991 CRYAAP02489 173 aa12.74□□□□□ -0.37
SCARNA20.5-201ENST00000516991 C1QCP02747 245 aa12.74□□□□□ -0.37
SCARNA20.5-201ENST00000516991 IL6P05231 212 aa12.74□□□□□ -0.37
SCARNA20.5-201ENST00000516991 GSNP06396 782 aa12.74□□□□□ -0.37
SCARNA20.5-201ENST00000516991 CDH2P19022 906 aaPredicted RBP12.74□□□□□ -0.37
SCARNA20.5-201ENST00000516991 IL12AP29459 219 aa12.74□□□□□ -0.37
SCARNA20.5-201ENST00000516991 BST1Q10588 318 aa12.74□□□□□ -0.37
SCARNA20.5-201ENST00000516991 SWI5Q1ZZU3 235 aa12.74□□□□□ -0.37
SCARNA20.5-201ENST00000516991 TBRG1Q3YBR2 411 aa12.74□□□□□ -0.37
SCARNA20.5-201ENST00000516991 HIKESHIQ53FT3 197 aa12.74□□□□□ -0.37
SCARNA20.5-201ENST00000516991 PRAMEF8Q5VWM4 474 aa12.74□□□□□ -0.37
SCARNA20.5-201ENST00000516991 PRAMEF7Q5VXH5 474 aa12.74□□□□□ -0.37
SCARNA20.5-201ENST00000516991 FAM166AQ6J272 317 aa12.74□□□□□ -0.37
SCARNA20.5-201ENST00000516991 ZNF836Q6ZNA1 936 aa12.74□□□□□ -0.37
SCARNA20.5-201ENST00000516991 SLC46A3Q7Z3Q1 461 aa12.74□□□□□ -0.37
SCARNA20.5-201ENST00000516991 CROCCP2Q86T23 111 aa12.74□□□□□ -0.37
SCARNA20.5-201ENST00000516991 CADM2Q8N3J6 435 aa12.74□□□□□ -0.37
SCARNA20.5-201ENST00000516991 OR1K1Q8NGR3 316 aa12.74□□□□□ -0.37
SCARNA20.5-201ENST00000516991 MAGEE2Q8TD90 523 aaPredicted RBP12.74□□□□□ -0.37
SCARNA20.5-201ENST00000516991 AURKBQ96GD4 344 aaPredicted RBP12.74□□□□□ -0.37
SCARNA20.5-201ENST00000516991 KCNK9Q9NPC2 374 aa12.74□□□□□ -0.37
SCARNA20.5-201ENST00000516991 RLIMQ9NVW2 624 aa12.74□□□□□ -0.37
SCARNA20.5-201ENST00000516991 ADPRHL2Q9NX46 363 aa12.74□□□□□ -0.37
SCARNA20.5-201ENST00000516991 KCNS2Q9ULS6 477 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms