RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 ATP6V1B2P21281 511 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 CNR1P21554 472 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 ME2P23368 584 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 MAPK1P28482 360 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 HMOX2P30519 316 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 BSGP35613 385 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 POLR2IP36954 125 aaKnown RBP2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 BUD31P41223 144 aaPredicted RBP2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 SSR2P43308 183 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 XCR1P46094 333 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 NUDT2P50583 147 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 RPL14P50914 215 aaKnown RBP2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 FABP6P51161 128 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 BMXP51813 675 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 PLA2G16P53816 162 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 CDH13P55290 713 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 LIM2P55344 173 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 CLDN15P56746 228 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 RAB38P57729 211 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 IGLV3-21P80748 117 aaPredicted RBP2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 RHAGQ02094 409 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 MAP4K2Q12851 820 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 MAD2L1Q13257 205 aaPredicted RBP2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 SLAMF1Q13291 335 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 RCAN2Q14206 197 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 FLOT2Q14254 428 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 RAB39AQ14964 217 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 KIAA0040Q15053 153 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 ELAVL1Q15717 326 aaKnown RBP2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 NSDHLQ15738 373 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 ATP6AP1Q15904 470 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 C18orf21Q32NC0 220 aaPredicted RBP2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 ZNF829Q3KNS6 432 aaPredicted RBP2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 LSM12Q3MHD2 195 aaKnown RBP2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 UGT3A2Q3SY77 523 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 DEFB134Q4QY38 66 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 CCDC92Q53HC0 331 aaPredicted RBP2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 ARL13AQ5H913 290 aaPredicted RBP2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 MTX3Q5HYI7 312 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 FGD3Q5JSP0 725 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 KLF17Q5JT82 389 aaPredicted RBP2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 KANK2Q63ZY3 851 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 GTF2IRD2BQ6EKJ0 949 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 OGFOD2Q6N063 350 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 LETMD1Q6P1Q0 360 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 PAPD4Q6PIY7 484 aaKnown RBP2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 STAC2Q6ZMT1 411 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 SLC16A12Q6ZSM3 486 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 USP51Q70EK9 711 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 ANKRD37Q7Z713 158 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 GTF2IRD2Q86UP8 949 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 IGFN1Q86VF2 1251 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 NUDT13Q86X67 352 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 CLVS1Q8IUQ0 354 aaPredicted RBP2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 PLD3Q8IV08 490 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 CA13Q8N1Q1 262 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 TMEM132CQ8N3T6 1108 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 MFSD4AQ8N468 514 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 GALNT4Q8N4A0 578 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 TMEM156Q8N614 296 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 SLC15A4Q8N697 577 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 CCNYL1Q8N7R7 359 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 CDYL2Q8N8U2 506 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 ZNF610Q8N9Z0 462 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 PCYOX1LQ8NBM8 494 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 MORN4Q8NDC4 146 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 NPEPL1Q8NDH3 523 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 OR8K3Q8NH51 312 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 ZNF420Q8TAQ5 688 aaPredicted RBP2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 PUM2Q8TB72 1066 aaKnown RBP eCLIP2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 SELENOMQ8WWX9 145 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 LRTOMTQ8WZ04 291 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 DAZLQ92904 295 aaKnown RBP2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 EXT2Q93063 718 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 WNT2BQ93097 391 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 ESAMQ96AP7 390 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 MTERF3Q96E29 417 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 RADILQ96JH8 1075 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 PPP3R2Q96LZ3 170 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 RILPQ96NA2 401 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 NSUN5Q96P11 429 aaKnown RBP2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 GNRHR2Q96P88 292 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 F2RL3Q96RI0 385 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 UCN2Q96RP3 112 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 MTERF1Q99551 399 aaKnown RBP2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 DHRS9Q9BPW9 319 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 FAIM2Q9BWQ8 316 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 OSBPL11Q9BXB4 747 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 ZNF717Q9BY31 904 aaPredicted RBP2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 MROQ9BYG7 248 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 ACTR6Q9GZN1 396 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 VN1R1Q9GZP7 353 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 SPNS1Q9H2V7 528 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 KLHL31Q9H511 634 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 ARMC7Q9H6L4 198 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 EGLN3Q9H6Z9 239 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 SYNPO2LQ9H987 977 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 NANOGQ9H9S0 305 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 WDR41Q9HAD4 459 aa2.7□□□□□ -1.98
SCARNA13-201ENST00000516672 MID1IP1Q9NPA3 183 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms