RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 SLC22A25Q6T423 547 aa12.03□□□□□ -0.48
TCOF1-215ENST00000515516 KLHL24Q6TFL4 600 aa12.03□□□□□ -0.48
TCOF1-215ENST00000515516 SEZ6L2Q6UXD5 910 aa12.03□□□□□ -0.48
TCOF1-215ENST00000515516 SERPINA11Q86U17 422 aa12.03□□□□□ -0.48
TCOF1-215ENST00000515516 POMGNT2Q8NAT1 580 aa12.03□□□□□ -0.48
TCOF1-215ENST00000515516 STK35Q8TDR2 534 aa12.03□□□□□ -0.48
TCOF1-215ENST00000515516 MAL2Q969L2 176 aa12.03□□□□□ -0.48
TCOF1-215ENST00000515516 SLC35B4Q969S0 331 aa12.03□□□□□ -0.48
TCOF1-215ENST00000515516 TMEM45BQ96B21 275 aa12.03□□□□□ -0.48
TCOF1-215ENST00000515516 EBF4Q9BQW3 602 aa12.03□□□□□ -0.48
TCOF1-215ENST00000515516 RABEP2Q9H5N1 569 aa12.03□□□□□ -0.48
TCOF1-215ENST00000515516 INTS9Q9NV88 658 aaKnown RBP12.03□□□□□ -0.48
TCOF1-215ENST00000515516 NPAP1Q9NZP6 1156 aa12.03□□□□□ -0.48
TCOF1-215ENST00000515516 SLC13A4Q9UKG4 626 aa12.03□□□□□ -0.48
TCOF1-215ENST00000515516 CORO2BQ9UQ03 480 aa12.03□□□□□ -0.48
TCOF1-215ENST00000515516 AMDHD2Q9Y303 409 aa12.03□□□□□ -0.48
TCOF1-215ENST00000515516 MAGED1Q9Y5V3 778 aaPredicted RBP12.03□□□□□ -0.48
TCOF1-215ENST00000515516 SLC25A15Q9Y619 301 aa12.03□□□□□ -0.48
TCOF1-215ENST00000515516 MAP1AP78559 2803 aaPredicted RBP12.03□□□□□ -0.48
TCOF1-215ENST00000515516 A0A1W2PR80 420 aa12.02□□□□□ -0.49
TCOF1-215ENST00000515516 ELOA3DA6NLF2 546 aaPredicted RBP12.02□□□□□ -0.49
TCOF1-215ENST00000515516 SHISA9B4DS77 424 aa12.02□□□□□ -0.49
TCOF1-215ENST00000515516 OVOL3O00110 214 aa12.02□□□□□ -0.49
TCOF1-215ENST00000515516 ITGA5P08648 1049 aa12.02□□□□□ -0.49
TCOF1-215ENST00000515516 BMP2P12643 396 aa12.02□□□□□ -0.49
TCOF1-215ENST00000515516 PRG2P13727 222 aa12.02□□□□□ -0.49
TCOF1-215ENST00000515516 ETS2P15036 469 aa12.02□□□□□ -0.49
TCOF1-215ENST00000515516 CD40P25942 277 aa12.02□□□□□ -0.49
TCOF1-215ENST00000515516 MPGP29372 298 aa12.02□□□□□ -0.49
TCOF1-215ENST00000515516 CDKN1AP38936 164 aa12.02□□□□□ -0.49
TCOF1-215ENST00000515516 ATP4BP51164 291 aa12.02□□□□□ -0.49
TCOF1-215ENST00000515516 VEZF1Q14119 521 aa12.02□□□□□ -0.49
TCOF1-215ENST00000515516 SQLEQ14534 574 aa12.02□□□□□ -0.49
TCOF1-215ENST00000515516 ELOA3BQ3SY89 546 aa12.02□□□□□ -0.49
TCOF1-215ENST00000515516 C1QTNF12Q5T7M4 302 aa12.02□□□□□ -0.49
TCOF1-215ENST00000515516 TSPO2Q5TGU0 170 aa12.02□□□□□ -0.49
TCOF1-215ENST00000515516 REEP3Q6NUK4 255 aa12.02□□□□□ -0.49
TCOF1-215ENST00000515516 HDXQ7Z353 690 aa12.02□□□□□ -0.49
TCOF1-215ENST00000515516 C17orf78Q8N4C9 275 aa12.02□□□□□ -0.49
TCOF1-215ENST00000515516 C1orf162Q8NEQ5 155 aaPredicted RBP12.02□□□□□ -0.49
TCOF1-215ENST00000515516 ELOA3Q8NG57 546 aa12.02□□□□□ -0.49
TCOF1-215ENST00000515516 NFKBIDQ8NI38 313 aa12.02□□□□□ -0.49
TCOF1-215ENST00000515516 C3orf49Q96BT1 292 aa12.02□□□□□ -0.49
TCOF1-215ENST00000515516 SLC25A36Q96CQ1 311 aa12.02□□□□□ -0.49
TCOF1-215ENST00000515516 HS6ST2Q96MM7 605 aa12.02□□□□□ -0.49
TCOF1-215ENST00000515516 C1QTNF6Q9BXI9 259 aa12.02□□□□□ -0.49
TCOF1-215ENST00000515516 SLCO5A1Q9H2Y9 848 aa12.02□□□□□ -0.49
TCOF1-215ENST00000515516 BARX1Q9HBU1 254 aaPredicted RBP12.02□□□□□ -0.49
TCOF1-215ENST00000515516 SLC7A10Q9NS82 523 aa12.02□□□□□ -0.49
TCOF1-215ENST00000515516 ARGLU1Q9NWB6 273 aaPredicted RBP12.02□□□□□ -0.49
TCOF1-215ENST00000515516 TMEM45AQ9NWC5 275 aa12.02□□□□□ -0.49
TCOF1-215ENST00000515516 SELENONQ9NZV5 590 aa12.02□□□□□ -0.49
TCOF1-215ENST00000515516 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.02□□□□□ -0.49
TCOF1-215ENST00000515516 RASD1Q9Y272 281 aa12.02□□□□□ -0.49
TCOF1-215ENST00000515516 ZNF469Q96JG9 3925 aaPredicted RBP12.02□□□□□ -0.49
TCOF1-215ENST00000515516 NF1P21359 2839 aa12.01□□□□□ -0.49
TCOF1-215ENST00000515516 PRORSD1PA6NEY8 169 aa12.01□□□□□ -0.49
TCOF1-215ENST00000515516 OR6C65A6NJZ3 312 aa12.01□□□□□ -0.49
TCOF1-215ENST00000515516 HMGB1P1B2RPK0 211 aaPredicted RBP12.01□□□□□ -0.49
TCOF1-215ENST00000515516 FRS3O43559 492 aa12.01□□□□□ -0.49
TCOF1-215ENST00000515516 WNT11O96014 354 aa12.01□□□□□ -0.49
TCOF1-215ENST00000515516 CDH2P19022 906 aaPredicted RBP12.01□□□□□ -0.49
TCOF1-215ENST00000515516 SLC6A2P23975 617 aa12.01□□□□□ -0.49
TCOF1-215ENST00000515516 PRKAR1BP31321 381 aa12.01□□□□□ -0.49
TCOF1-215ENST00000515516 PRPS1P60891 318 aa12.01□□□□□ -0.49
TCOF1-215ENST00000515516 NCALDP61601 193 aa12.01□□□□□ -0.49
TCOF1-215ENST00000515516 PPP2R2BQ00005 443 aa12.01□□□□□ -0.49
TCOF1-215ENST00000515516 HOXC5Q00444 222 aa12.01□□□□□ -0.49
TCOF1-215ENST00000515516 CDK6Q00534 326 aa12.01□□□□□ -0.49
TCOF1-215ENST00000515516 PGGHGQ32M88 737 aa12.01□□□□□ -0.49
TCOF1-215ENST00000515516 TTMPQ5BVD1 217 aa12.01□□□□□ -0.49
TCOF1-215ENST00000515516 LRIF1Q5T3J3 769 aa12.01□□□□□ -0.49
TCOF1-215ENST00000515516 FUNDC1Q8IVP5 155 aa12.01□□□□□ -0.49
TCOF1-215ENST00000515516 FBXL14Q8N1E6 418 aa12.01□□□□□ -0.49
TCOF1-215ENST00000515516 MFSD8Q8NHS3 518 aa12.01□□□□□ -0.49
TCOF1-215ENST00000515516 RNF217Q8TC41 542 aa12.01□□□□□ -0.49
TCOF1-215ENST00000515516 ADAD1Q96M93 576 aaKnown RBP12.01□□□□□ -0.49
TCOF1-215ENST00000515516 ZNF607Q96SK3 696 aa12.01□□□□□ -0.49
TCOF1-215ENST00000515516 TRAF4Q9BUZ4 470 aaPredicted RBP12.01□□□□□ -0.49
TCOF1-215ENST00000515516 FKRPQ9H9S5 495 aa12.01□□□□□ -0.49
TCOF1-215ENST00000515516 SLC17A5Q9NRA2 495 aa12.01□□□□□ -0.49
TCOF1-215ENST00000515516 ACANP16112 2415 aa12□□□□□ -0.49
TCOF1-215ENST00000515516 ZNF587BE7ETH6 402 aa12□□□□□ -0.49
TCOF1-215ENST00000515516 PDLIM1O00151 329 aa12□□□□□ -0.49
TCOF1-215ENST00000515516 OR2T1O43869 369 aa12□□□□□ -0.49
TCOF1-215ENST00000515516 SERPINB7O75635 380 aa12□□□□□ -0.49
TCOF1-215ENST00000515516 ARAFP10398 606 aa12□□□□□ -0.49
TCOF1-215ENST00000515516 PNMTP11086 282 aa12□□□□□ -0.49
TCOF1-215ENST00000515516 BMP4P12644 408 aa12□□□□□ -0.49
TCOF1-215ENST00000515516 FABP6P51161 128 aa12□□□□□ -0.49
TCOF1-215ENST00000515516 FOXG1P55316 489 aaPredicted RBP12□□□□□ -0.49
TCOF1-215ENST00000515516 IL1RL1Q01638 556 aa12□□□□□ -0.49
TCOF1-215ENST00000515516 TNK1Q13470 666 aa12□□□□□ -0.49
TCOF1-215ENST00000515516 PAGE3Q5JUK9 113 aa12□□□□□ -0.49
TCOF1-215ENST00000515516 NIPAL3Q6P499 406 aa12□□□□□ -0.49
TCOF1-215ENST00000515516 C5orf46Q6UWT4 87 aa12□□□□□ -0.49
TCOF1-215ENST00000515516 CREB3L2Q70SY1 520 aa12□□□□□ -0.49
TCOF1-215ENST00000515516 BHLHE22Q8NFJ8 381 aaPredicted RBP12□□□□□ -0.49
TCOF1-215ENST00000515516 ZNF385AQ96PM9 386 aaKnown RBP12□□□□□ -0.49
TCOF1-215ENST00000515516 DHRS9Q9BPW9 319 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms