RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, human

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1I3-231	ENST00000512340	CYBRD1	Q53TN4	286 aa		6.69	□□□□□ -1.34
NR1I3-231	ENST00000512340	C1orf140	Q5VVS0	124 aa		6.69	□□□□□ -1.34
NR1I3-231	ENST00000512340	TMEM225	Q6GV28	225 aa		6.69	□□□□□ -1.34
NR1I3-231	ENST00000512340	TTC33	Q6PID6	262 aa	Predicted RBP	6.69	□□□□□ -1.34
NR1I3-231	ENST00000512340	PAQR6	Q6TCH4	344 aa		6.69	□□□□□ -1.34
NR1I3-231	ENST00000512340	TRPM8	Q7Z2W7	1104 aa		6.69	□□□□□ -1.34
NR1I3-231	ENST00000512340	NANOGNB	Q7Z5D8	188 aa		6.69	□□□□□ -1.34
NR1I3-231	ENST00000512340	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	6.69	□□□□□ -1.34
NR1I3-231	ENST00000512340	CARM1	Q86X55	608 aa		6.69	□□□□□ -1.34
NR1I3-231	ENST00000512340	ADGRG3	Q86Y34	549 aa		6.69	□□□□□ -1.34
NR1I3-231	ENST00000512340	TREML1	Q86YW5	311 aa		6.69	□□□□□ -1.34
NR1I3-231	ENST00000512340	ZNF100	Q8IYN0	542 aa		6.69	□□□□□ -1.34
NR1I3-231	ENST00000512340	CDK20	Q8IZL9	346 aa		6.69	□□□□□ -1.34
NR1I3-231	ENST00000512340	GCNT2	Q8N0V5	402 aa		6.69	□□□□□ -1.34
NR1I3-231	ENST00000512340	C10orf53	Q8N6V4	93 aa		6.69	□□□□□ -1.34
NR1I3-231	ENST00000512340	GEMIN6	Q8WXD5	167 aa	Known RBP	6.69	□□□□□ -1.34
NR1I3-231	ENST00000512340	C3orf49	Q96BT1	292 aa		6.69	□□□□□ -1.34
NR1I3-231	ENST00000512340	ADGRG7	Q96K78	797 aa		6.69	□□□□□ -1.34
NR1I3-231	ENST00000512340	HS6ST2	Q96MM7	605 aa		6.69	□□□□□ -1.34
NR1I3-231	ENST00000512340	RBM24	Q9BX46	236 aa	Known RBP	6.69	□□□□□ -1.34
NR1I3-231	ENST00000512340	ASPN	Q9BXN1	380 aa		6.69	□□□□□ -1.34
NR1I3-231	ENST00000512340	HDHD5	Q9BXW7	423 aa		6.69	□□□□□ -1.34
NR1I3-231	ENST00000512340	TRIM15	Q9C019	465 aa		6.69	□□□□□ -1.34
NR1I3-231	ENST00000512340	MUC13	Q9H3R2	512 aa		6.69	□□□□□ -1.34
NR1I3-231	ENST00000512340	RASD1	Q9Y272	281 aa		6.69	□□□□□ -1.34
NR1I3-231	ENST00000512340	CORIN	Q9Y5Q5	1042 aa		6.69	□□□□□ -1.34
NR1I3-231	ENST00000512340	ANKHD1	Q8IWZ3	2542 aa	Known RBP	6.69	□□□□□ -1.34
NR1I3-231	ENST00000512340	CELSR2	Q9HCU4	2923 aa		6.68	□□□□□ -1.34
NR1I3-231	ENST00000512340	TRAV36DV7	A0A075B6V5	113 aa		6.68	□□□□□ -1.34
NR1I3-231	ENST00000512340		A0A1B0GWA3	101 aa		6.68	□□□□□ -1.34
NR1I3-231	ENST00000512340		A0A1W2PNR3	127 aa		6.68	□□□□□ -1.34
NR1I3-231	ENST00000512340	ZNF724	A8MTY0	619 aa		6.68	□□□□□ -1.34
NR1I3-231	ENST00000512340	CHP2	O43745	196 aa		6.68	□□□□□ -1.34
NR1I3-231	ENST00000512340	CYTIP	O60759	359 aa		6.68	□□□□□ -1.34
NR1I3-231	ENST00000512340	SS18L1	O75177	396 aa	Predicted RBP	6.68	□□□□□ -1.34
NR1I3-231	ENST00000512340	MRPL33	O75394	65 aa	Known RBP	6.68	□□□□□ -1.34
NR1I3-231	ENST00000512340	KRT33A	O76009	404 aa		6.68	□□□□□ -1.34
NR1I3-231	ENST00000512340	TOX	O94900	526 aa		6.68	□□□□□ -1.34
NR1I3-231	ENST00000512340	OR5F1	O95221	314 aa		6.68	□□□□□ -1.34
NR1I3-231	ENST00000512340	CNOT4	O95628	575 aa	Known RBP	6.68	□□□□□ -1.34
NR1I3-231	ENST00000512340	TGM6	O95932	706 aa		6.68	□□□□□ -1.34
NR1I3-231	ENST00000512340	MT-ATP6	P00846	226 aa		6.68	□□□□□ -1.34
NR1I3-231	ENST00000512340	C1QC	P02747	245 aa		6.68	□□□□□ -1.34
NR1I3-231	ENST00000512340	OPN1SW	P03999	348 aa		6.68	□□□□□ -1.34
NR1I3-231	ENST00000512340	HSD17B1	P14061	328 aa		6.68	□□□□□ -1.34
NR1I3-231	ENST00000512340	NQO1	P15559	274 aa	Known RBP	6.68	□□□□□ -1.34
NR1I3-231	ENST00000512340	PPP3CB	P16298	524 aa		6.68	□□□□□ -1.34
NR1I3-231	ENST00000512340	FPR1	P21462	350 aa		6.68	□□□□□ -1.34
NR1I3-231	ENST00000512340	SSTR2	P30874	369 aa		6.68	□□□□□ -1.34
NR1I3-231	ENST00000512340	CPOX	P36551	454 aa		6.68	□□□□□ -1.34
NR1I3-231	ENST00000512340	KIR2DL3	P43628	341 aa		6.68	□□□□□ -1.34
NR1I3-231	ENST00000512340	GSK3B	P49841	420 aa		6.68	□□□□□ -1.34
NR1I3-231	ENST00000512340	GZMM	P51124	257 aa		6.68	□□□□□ -1.34
NR1I3-231	ENST00000512340	ZNF136	P52737	540 aa		6.68	□□□□□ -1.34
NR1I3-231	ENST00000512340	TUBA4A	P68366	448 aa		6.68	□□□□□ -1.34
NR1I3-231	ENST00000512340	SIRPA	P78324	504 aa		6.68	□□□□□ -1.34
NR1I3-231	ENST00000512340	IL1RL1	Q01638	556 aa		6.68	□□□□□ -1.34
NR1I3-231	ENST00000512340	ST3GAL3	Q11203	375 aa		6.68	□□□□□ -1.34
NR1I3-231	ENST00000512340	C1D	Q13901	141 aa	Known RBP	6.68	□□□□□ -1.34
NR1I3-231	ENST00000512340	OR7A5	Q15622	319 aa		6.68	□□□□□ -1.34
NR1I3-231	ENST00000512340	NRF1	Q16656	503 aa		6.68	□□□□□ -1.34
NR1I3-231	ENST00000512340	DNAL1	Q4LDG9	190 aa		6.68	□□□□□ -1.34
NR1I3-231	ENST00000512340	MTX3	Q5HYI7	312 aa		6.68	□□□□□ -1.34
NR1I3-231	ENST00000512340	FAM69A	Q5T7M9	428 aa		6.68	□□□□□ -1.34
NR1I3-231	ENST00000512340	FBXW10	Q5XX13	1052 aa		6.68	□□□□□ -1.34
NR1I3-231	ENST00000512340	GLYAT	Q6IB77	296 aa		6.68	□□□□□ -1.34
NR1I3-231	ENST00000512340	C6orf89	Q6UWU4	347 aa		6.68	□□□□□ -1.34
NR1I3-231	ENST00000512340	MEX3B	Q6ZN04	569 aa	Known RBP	6.68	□□□□□ -1.34
NR1I3-231	ENST00000512340	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	6.68	□□□□□ -1.34
NR1I3-231	ENST00000512340	GALNT5	Q7Z7M9	940 aa		6.68	□□□□□ -1.34
NR1I3-231	ENST00000512340	ATG4D	Q86TL0	474 aa	Predicted RBP	6.68	□□□□□ -1.34
NR1I3-231	ENST00000512340	DEFB107A	Q8IZN7	70 aa		6.68	□□□□□ -1.34
NR1I3-231	ENST00000512340	RPRML	Q8N4K4	120 aa		6.68	□□□□□ -1.34
NR1I3-231	ENST00000512340	OR6S1	Q8NH40	331 aa		6.68	□□□□□ -1.34
NR1I3-231	ENST00000512340	MFSD8	Q8NHS3	518 aa		6.68	□□□□□ -1.34
NR1I3-231	ENST00000512340	VANGL1	Q8TAA9	524 aa	Predicted RBP	6.68	□□□□□ -1.34
NR1I3-231	ENST00000512340	RNF128	Q8TEB7	428 aa		6.68	□□□□□ -1.34
NR1I3-231	ENST00000512340	ROBO4	Q8WZ75	1007 aa		6.68	□□□□□ -1.34
NR1I3-231	ENST00000512340	LRGUK	Q96M69	825 aa		6.68	□□□□□ -1.34
NR1I3-231	ENST00000512340	NSMCE2	Q96MF7	247 aa		6.68	□□□□□ -1.34
NR1I3-231	ENST00000512340	CDRT15	Q96T59	188 aa		6.68	□□□□□ -1.34
NR1I3-231	ENST00000512340	ARHGDIG	Q99819	225 aa		6.68	□□□□□ -1.34
NR1I3-231	ENST00000512340	TMEM43	Q9BTV4	400 aa		6.68	□□□□□ -1.34
NR1I3-231	ENST00000512340	FNDC11	Q9BVV2	318 aa		6.68	□□□□□ -1.34
NR1I3-231	ENST00000512340	SF3B5	Q9BWJ5	86 aa	Known RBP	6.68	□□□□□ -1.34
NR1I3-231	ENST00000512340	TRIM8	Q9BZR9	551 aa		6.68	□□□□□ -1.34
NR1I3-231	ENST00000512340	SLC19A3	Q9BZV2	496 aa		6.68	□□□□□ -1.34
NR1I3-231	ENST00000512340	C1orf21	Q9H246	121 aa		6.68	□□□□□ -1.34
NR1I3-231	ENST00000512340	NGB	Q9NPG2	151 aa		6.68	□□□□□ -1.34
NR1I3-231	ENST00000512340	ARL8B	Q9NVJ2	186 aa		6.68	□□□□□ -1.34
NR1I3-231	ENST00000512340	CMTM6	Q9NX76	183 aa		6.68	□□□□□ -1.34
NR1I3-231	ENST00000512340	KLHL13	Q9P2N7	655 aa		6.68	□□□□□ -1.34
NR1I3-231	ENST00000512340	ABCD2	Q9UBJ2	740 aa		6.68	□□□□□ -1.34
NR1I3-231	ENST00000512340	KCNN3	Q9UGI6	736 aa		6.68	□□□□□ -1.34
NR1I3-231	ENST00000512340	PRPF19	Q9UMS4	504 aa	Known RBP	6.68	□□□□□ -1.34
NR1I3-231	ENST00000512340	MED12L	Q86YW9	2145 aa		6.68	□□□□□ -1.34
NR1I3-231	ENST00000512340	CRYBG3	Q68DQ2	2970 aa		6.68	□□□□□ -1.34
NR1I3-231	ENST00000512340		A0A087WUJ7	227 aa		6.67	□□□□□ -1.34
NR1I3-231	ENST00000512340		A0A0B4J2E0	115 aa		6.67	□□□□□ -1.34
NR1I3-231	ENST00000512340		A0A1B0GX12	115 aa		6.67	□□□□□ -1.34

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms