RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 TOMM34Q15785 309 aaPredicted RBP7.86□□□□□ -1.15
NUP54-211ENST00000512151 ADRM1Q16186 407 aa7.86□□□□□ -1.15
NUP54-211ENST00000512151 SMU1Q2TAY7 513 aa7.86□□□□□ -1.15
NUP54-211ENST00000512151 BEAN1Q3B7T3 259 aa7.86□□□□□ -1.15
NUP54-211ENST00000512151 ELFN2Q5R3F8 820 aa7.86□□□□□ -1.15
NUP54-211ENST00000512151 NXNQ6DKJ4 435 aa7.86□□□□□ -1.15
NUP54-211ENST00000512151 FAM71E1Q6IPT2 247 aa7.86□□□□□ -1.15
NUP54-211ENST00000512151 DOK3Q7L591 496 aa7.86□□□□□ -1.15
NUP54-211ENST00000512151 PAGE2Q7Z2X7 111 aa7.86□□□□□ -1.15
NUP54-211ENST00000512151 CDK20Q8IZL9 346 aa7.86□□□□□ -1.15
NUP54-211ENST00000512151 BCL6BQ8N143 479 aaPredicted RBP7.86□□□□□ -1.15
NUP54-211ENST00000512151 ZNF527Q8NB42 609 aa7.86□□□□□ -1.15
NUP54-211ENST00000512151 CLHC1Q8NHS4 586 aa7.86□□□□□ -1.15
NUP54-211ENST00000512151 STON2Q8WXE9 905 aa7.86□□□□□ -1.15
NUP54-211ENST00000512151 EXOSC8Q96B26 276 aaKnown RBP7.86□□□□□ -1.15
NUP54-211ENST00000512151 METTL2AQ96IZ6 378 aaKnown RBP7.86□□□□□ -1.15
NUP54-211ENST00000512151 TEX37Q96LM6 180 aa7.86□□□□□ -1.15
NUP54-211ENST00000512151 ZNF48Q96MX3 618 aaPredicted RBP7.86□□□□□ -1.15
NUP54-211ENST00000512151 TSSK3Q96PN8 268 aa7.86□□□□□ -1.15
NUP54-211ENST00000512151 CITED1Q99966 193 aa7.86□□□□□ -1.15
NUP54-211ENST00000512151 RBM4BQ9BQ04 359 aaKnown RBP7.86□□□□□ -1.15
NUP54-211ENST00000512151 TPK1Q9H3S4 243 aa7.86□□□□□ -1.15
NUP54-211ENST00000512151 ZNF385DQ9H6B1 395 aa7.86□□□□□ -1.15
NUP54-211ENST00000512151 SEC61A2Q9H9S3 476 aa7.86□□□□□ -1.15
NUP54-211ENST00000512151 NTN4Q9HB63 628 aa7.86□□□□□ -1.15
NUP54-211ENST00000512151 TCF7L2Q9NQB0 619 aa7.86□□□□□ -1.15
NUP54-211ENST00000512151 AIG1Q9NVV5 245 aa7.86□□□□□ -1.15
NUP54-211ENST00000512151 ASIC5Q9NY37 505 aa7.86□□□□□ -1.15
NUP54-211ENST00000512151 TAS2R9Q9NYW1 312 aa7.86□□□□□ -1.15
NUP54-211ENST00000512151 PSME2Q9UL46 239 aa7.86□□□□□ -1.15
NUP54-211ENST00000512151 TMED5Q9Y3A6 229 aa7.86□□□□□ -1.15
NUP54-211ENST00000512151 GPR45Q9Y5Y3 372 aa7.86□□□□□ -1.15
NUP54-211ENST00000512151 GNG14A0A1W2PPG7 69 aa7.85□□□□□ -1.15
NUP54-211ENST00000512151 SH3PXD2BA1X283 911 aa7.85□□□□□ -1.15
NUP54-211ENST00000512151 PLPP2O43688 288 aa7.85□□□□□ -1.15
NUP54-211ENST00000512151 PSMG1O95456 288 aa7.85□□□□□ -1.15
NUP54-211ENST00000512151 H6PDO95479 791 aa7.85□□□□□ -1.15
NUP54-211ENST00000512151 TSPAN15O95858 294 aa7.85□□□□□ -1.15
NUP54-211ENST00000512151 RNASE1P07998 156 aaKnown RBP7.85□□□□□ -1.15
NUP54-211ENST00000512151 IL3P08700 152 aa7.85□□□□□ -1.15
NUP54-211ENST00000512151 ADRA2AP08913 450 aa7.85□□□□□ -1.15
NUP54-211ENST00000512151 ELK4P28324 431 aa7.85□□□□□ -1.15
NUP54-211ENST00000512151 IL12AP29459 219 aa7.85□□□□□ -1.15
NUP54-211ENST00000512151 CALCRP30988 508 aa7.85□□□□□ -1.15
NUP54-211ENST00000512151 GPR6P46095 362 aaPredicted RBP7.85□□□□□ -1.15
NUP54-211ENST00000512151 NME5P56597 212 aa7.85□□□□□ -1.15
NUP54-211ENST00000512151 HGFACQ04756 655 aa7.85□□□□□ -1.15
NUP54-211ENST00000512151 C2orf80Q0P641 193 aa7.85□□□□□ -1.15
NUP54-211ENST00000512151 BNIP1Q12981 228 aa7.85□□□□□ -1.15
NUP54-211ENST00000512151 CD226Q15762 336 aa7.85□□□□□ -1.15
NUP54-211ENST00000512151 ASPHD2Q6ICH7 369 aa7.85□□□□□ -1.15
NUP54-211ENST00000512151 OR7E24Q6IFN5 339 aa7.85□□□□□ -1.15
NUP54-211ENST00000512151 LSRQ86X29 649 aaPredicted RBP7.85□□□□□ -1.15
NUP54-211ENST00000512151 KRTCAP2Q8N6L1 136 aa7.85□□□□□ -1.15
NUP54-211ENST00000512151 SYT14Q8NB59 555 aa7.85□□□□□ -1.15
NUP54-211ENST00000512151 NANPQ8TBE9 248 aa7.85□□□□□ -1.15
NUP54-211ENST00000512151 PIK3R3Q92569 461 aa7.85□□□□□ -1.15
NUP54-211ENST00000512151 YIPF5Q969M3 257 aa7.85□□□□□ -1.15
NUP54-211ENST00000512151 APH1AQ96BI3 265 aa7.85□□□□□ -1.15
NUP54-211ENST00000512151 SIKE1Q9BRV8 207 aa7.85□□□□□ -1.15
NUP54-211ENST00000512151 ASB6Q9NWX5 421 aa7.85□□□□□ -1.15
NUP54-211ENST00000512151 NOP53Q9NZM5 478 aaKnown RBP7.85□□□□□ -1.15
NUP54-211ENST00000512151 MALT1Q9UDY8 824 aa7.85□□□□□ -1.15
NUP54-211ENST00000512151 FBXO9Q9UK97 447 aaPredicted RBP7.85□□□□□ -1.15
NUP54-211ENST00000512151 AMDHD2Q9Y303 409 aa7.85□□□□□ -1.15
NUP54-211ENST00000512151 MMP24Q9Y5R2 645 aa7.85□□□□□ -1.15
NUP54-211ENST00000512151 IGKV3D-15A0A087WSY6 115 aa7.84□□□□□ -1.15
NUP54-211ENST00000512151 CFAP73A6NFT4 308 aa7.84□□□□□ -1.15
NUP54-211ENST00000512151 H0YHG0 523 aa7.84□□□□□ -1.15
NUP54-211ENST00000512151 M0QZ24 198 aa7.84□□□□□ -1.15
NUP54-211ENST00000512151 UPK1AO00322 258 aa7.84□□□□□ -1.15
NUP54-211ENST00000512151 UBDO15205 165 aa7.84□□□□□ -1.15
NUP54-211ENST00000512151 AKAP10O43572 662 aa7.84□□□□□ -1.15
NUP54-211ENST00000512151 GUCY1B2O75343 617 aa7.84□□□□□ -1.15
NUP54-211ENST00000512151 DCTN3O75935 186 aa7.84□□□□□ -1.15
NUP54-211ENST00000512151 UBOX5O94941 541 aa7.84□□□□□ -1.15
NUP54-211ENST00000512151 HPXP02790 462 aa7.84□□□□□ -1.15
NUP54-211ENST00000512151 PRPS2P11908 318 aa7.84□□□□□ -1.15
NUP54-211ENST00000512151 FPR2P25090 351 aa7.84□□□□□ -1.15
NUP54-211ENST00000512151 GABRA3P34903 492 aa7.84□□□□□ -1.15
NUP54-211ENST00000512151 THBS4P35443 961 aa7.84□□□□□ -1.15
NUP54-211ENST00000512151 RNF144AP50876 292 aaPredicted RBP7.84□□□□□ -1.15
NUP54-211ENST00000512151 CLDN8P56748 225 aa7.84□□□□□ -1.15
NUP54-211ENST00000512151 UFM1P61960 85 aa7.84□□□□□ -1.15
NUP54-211ENST00000512151 TRA2BP62995 288 aaKnown RBP7.84□□□□□ -1.15
NUP54-211ENST00000512151 ZNF763Q0D2J5 394 aa7.84□□□□□ -1.15
NUP54-211ENST00000512151 MAD2L1Q13257 205 aaPredicted RBP7.84□□□□□ -1.15
NUP54-211ENST00000512151 ZNF385BQ569K4 471 aa7.84□□□□□ -1.15
NUP54-211ENST00000512151 VAX1Q5SQQ9 334 aa7.84□□□□□ -1.15
NUP54-211ENST00000512151 ABLIM2Q6H8Q1 611 aa7.84□□□□□ -1.15
NUP54-211ENST00000512151 ANKRD26P1Q6NSI1 321 aa7.84□□□□□ -1.15
NUP54-211ENST00000512151 RIMKLAQ8IXN7 391 aa7.84□□□□□ -1.15
NUP54-211ENST00000512151 FAM9CQ8IZT9 166 aa7.84□□□□□ -1.15
NUP54-211ENST00000512151 TEX29Q8N6K0 151 aa7.84□□□□□ -1.15
NUP54-211ENST00000512151 FITM2Q8N6M3 262 aa7.84□□□□□ -1.15
NUP54-211ENST00000512151 KIR3DL3Q8N743 410 aa7.84□□□□□ -1.15
NUP54-211ENST00000512151 B4GALNT2Q8NHY0 566 aa7.84□□□□□ -1.15
NUP54-211ENST00000512151 CDC26Q8NHZ8 85 aa7.84□□□□□ -1.15
NUP54-211ENST00000512151 LMF2Q9BU23 707 aaKnown RBP7.84□□□□□ -1.15
NUP54-211ENST00000512151 FAIM2Q9BWQ8 316 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms