RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 OR9K2Q8NGE7 335 aa11.72□□□□□ -0.53
RNF4-215ENST00000511843 OR10A6Q8NH74 314 aa11.72□□□□□ -0.53
RNF4-215ENST00000511843 NEUROG1Q92886 237 aa11.72□□□□□ -0.53
RNF4-215ENST00000511843 ZNF385AQ96PM9 386 aaKnown RBP11.72□□□□□ -0.53
RNF4-215ENST00000511843 ZNF607Q96SK3 696 aa11.72□□□□□ -0.53
RNF4-215ENST00000511843 CCL19Q99731 98 aa11.72□□□□□ -0.53
RNF4-215ENST00000511843 PTDSS2Q9BVG9 487 aa11.72□□□□□ -0.53
RNF4-215ENST00000511843 SPATA5L1Q9BVQ7 753 aa11.72□□□□□ -0.53
RNF4-215ENST00000511843 TAPBPLQ9BX59 468 aa11.72□□□□□ -0.53
RNF4-215ENST00000511843 SAR1AQ9NR31 198 aa11.72□□□□□ -0.53
RNF4-215ENST00000511843 SLC7A10Q9NS82 523 aa11.72□□□□□ -0.53
RNF4-215ENST00000511843 NPAP1Q9NZP6 1156 aa11.72□□□□□ -0.53
RNF4-215ENST00000511843 USP22Q9UPT9 525 aa11.72□□□□□ -0.53
RNF4-215ENST00000511843 ARID1AO14497 2285 aa11.71□□□□□ -0.53
RNF4-215ENST00000511843 IGKV1D-42A0A075B6H8 117 aa11.71□□□□□ -0.53
RNF4-215ENST00000511843 CIB4A0PJX0 185 aa11.71□□□□□ -0.53
RNF4-215ENST00000511843 CCT8L1PA6NM43 557 aa11.71□□□□□ -0.53
RNF4-215ENST00000511843 FXYD1O00168 92 aa11.71□□□□□ -0.53
RNF4-215ENST00000511843 CLOCKO15516 846 aa11.71□□□□□ -0.53
RNF4-215ENST00000511843 AHSA1O95433 338 aa11.71□□□□□ -0.53
RNF4-215ENST00000511843 GGT1P19440 569 aa11.71□□□□□ -0.53
RNF4-215ENST00000511843 MAP2K6P52564 334 aa11.71□□□□□ -0.53
RNF4-215ENST00000511843 PCBP3P57721 371 aaKnown RBP11.71□□□□□ -0.53
RNF4-215ENST00000511843 NCALDP61601 193 aa11.71□□□□□ -0.53
RNF4-215ENST00000511843 ADAM8P78325 824 aa11.71□□□□□ -0.53
RNF4-215ENST00000511843 FOXD4Q12950 439 aaPredicted RBP11.71□□□□□ -0.53
RNF4-215ENST00000511843 TRMT5Q32P41 509 aaKnown RBP11.71□□□□□ -0.53
RNF4-215ENST00000511843 TSPO2Q5TGU0 170 aa11.71□□□□□ -0.53
RNF4-215ENST00000511843 REP15Q6BDI9 236 aa11.71□□□□□ -0.53
RNF4-215ENST00000511843 KRTAP1-3Q8IUG1 177 aa11.71□□□□□ -0.53
RNF4-215ENST00000511843 KDM8Q8N371 416 aa11.71□□□□□ -0.53
RNF4-215ENST00000511843 OR52N5Q8NH56 324 aa11.71□□□□□ -0.53
RNF4-215ENST00000511843 LILRB1Q8NHL6 650 aaPredicted RBP11.71□□□□□ -0.53
RNF4-215ENST00000511843 STK35Q8TDR2 534 aa11.71□□□□□ -0.53
RNF4-215ENST00000511843 TSPEARQ8WU66 669 aa11.71□□□□□ -0.53
RNF4-215ENST00000511843 HSD17B8Q92506 261 aa11.71□□□□□ -0.53
RNF4-215ENST00000511843 TMEM204Q9BSN7 226 aa11.71□□□□□ -0.53
RNF4-215ENST00000511843 KAT8Q9H7Z6 458 aaKnown RBP11.71□□□□□ -0.53
RNF4-215ENST00000511843 ASB6Q9NWX5 421 aa11.71□□□□□ -0.53
RNF4-215ENST00000511843 ARMCX1Q9P291 453 aa11.71□□□□□ -0.53
RNF4-215ENST00000511843 MALT1Q9UDY8 824 aa11.71□□□□□ -0.53
RNF4-215ENST00000511843 SLC9A8Q9Y2E8 581 aa11.71□□□□□ -0.53
RNF4-215ENST00000511843 LOC100653049A0A140TA62 436 aa11.7□□□□□ -0.54
RNF4-215ENST00000511843 PRORSD1PA6NEY8 169 aa11.7□□□□□ -0.54
RNF4-215ENST00000511843 DPRXA6NFQ7 191 aa11.7□□□□□ -0.54
RNF4-215ENST00000511843 FTCDNL1E5RQL4 147 aa11.7□□□□□ -0.54
RNF4-215ENST00000511843 M0QX08 132 aa11.7□□□□□ -0.54
RNF4-215ENST00000511843 MRASO14807 208 aa11.7□□□□□ -0.54
RNF4-215ENST00000511843 SERPINB7O75635 380 aa11.7□□□□□ -0.54
RNF4-215ENST00000511843 KRT34O76011 436 aa11.7□□□□□ -0.54
RNF4-215ENST00000511843 ITGA5P08648 1049 aa11.7□□□□□ -0.54
RNF4-215ENST00000511843 PNMTP11086 282 aa11.7□□□□□ -0.54
RNF4-215ENST00000511843 CDH2P19022 906 aaPredicted RBP11.7□□□□□ -0.54
RNF4-215ENST00000511843 GZMMP51124 257 aa11.7□□□□□ -0.54
RNF4-215ENST00000511843 CRYBA2P53672 197 aa11.7□□□□□ -0.54
RNF4-215ENST00000511843 NR1H2P55055 460 aa11.7□□□□□ -0.54
RNF4-215ENST00000511843 BSPH1Q075Z2 132 aa11.7□□□□□ -0.54
RNF4-215ENST00000511843 PPA1Q15181 289 aa11.7□□□□□ -0.54
RNF4-215ENST00000511843 OR1Q1Q15612 314 aa11.7□□□□□ -0.54
RNF4-215ENST00000511843 DUSP7Q16829 419 aa11.7□□□□□ -0.54
RNF4-215ENST00000511843 MMEL1Q495T6 779 aa11.7□□□□□ -0.54
RNF4-215ENST00000511843 ALG10BQ5I7T1 473 aa11.7□□□□□ -0.54
RNF4-215ENST00000511843 NCMAPQ5T1S8 102 aa11.7□□□□□ -0.54
RNF4-215ENST00000511843 TMEM225Q6GV28 225 aa11.7□□□□□ -0.54
RNF4-215ENST00000511843 NANOGP8Q6NSW7 305 aa11.7□□□□□ -0.54
RNF4-215ENST00000511843 ADAM5Q6NVV9 412 aa11.7□□□□□ -0.54
RNF4-215ENST00000511843 AAED1Q7RTV5 226 aa11.7□□□□□ -0.54
RNF4-215ENST00000511843 NET1Q7Z628 596 aaPredicted RBP11.7□□□□□ -0.54
RNF4-215ENST00000511843 RBM45Q8IUH3 476 aaKnown RBP11.7□□□□□ -0.54
RNF4-215ENST00000511843 POU5F2Q8N7G0 328 aa11.7□□□□□ -0.54
RNF4-215ENST00000511843 LSMEM1Q8N8F7 131 aa11.7□□□□□ -0.54
RNF4-215ENST00000511843 KBTBD8Q8NFY9 601 aa11.7□□□□□ -0.54
RNF4-215ENST00000511843 OR4D11Q8NGI4 311 aa11.7□□□□□ -0.54
RNF4-215ENST00000511843 VANGL1Q8TAA9 524 aaPredicted RBP11.7□□□□□ -0.54
RNF4-215ENST00000511843 C10orf82Q8WW14 230 aa11.7□□□□□ -0.54
RNF4-215ENST00000511843 AKAP1Q92667 903 aaKnown RBP eCLIP11.7□□□□□ -0.54
RNF4-215ENST00000511843 TAAR8Q969N4 342 aa11.7□□□□□ -0.54
RNF4-215ENST00000511843 SLC35B4Q969S0 331 aa11.7□□□□□ -0.54
RNF4-215ENST00000511843 TAMM41Q96BW9 452 aa11.7□□□□□ -0.54
RNF4-215ENST00000511843 LRRC58Q96CX6 371 aa11.7□□□□□ -0.54
RNF4-215ENST00000511843 PERPQ96FX8 193 aa11.7□□□□□ -0.54
RNF4-215ENST00000511843 C1QTNF6Q9BXI9 259 aa11.7□□□□□ -0.54
RNF4-215ENST00000511843 TRIM2Q9C040 744 aa11.7□□□□□ -0.54
RNF4-215ENST00000511843 CCDC134Q9H6E4 229 aa11.7□□□□□ -0.54
RNF4-215ENST00000511843 NANOGQ9H9S0 305 aa11.7□□□□□ -0.54
RNF4-215ENST00000511843 BEX4Q9NWD9 120 aaPredicted RBP11.7□□□□□ -0.54
RNF4-215ENST00000511843 TESQ9UGI8 421 aaKnown RBP11.7□□□□□ -0.54
RNF4-215ENST00000511843 SLC13A4Q9UKG4 626 aa11.7□□□□□ -0.54
RNF4-215ENST00000511843 RNF115Q9Y4L5 304 aa11.7□□□□□ -0.54
RNF4-215ENST00000511843 ZNF469Q96JG9 3925 aaPredicted RBP11.69□□□□□ -0.54
RNF4-215ENST00000511843 VPS13CQ709C8 3753 aa11.69□□□□□ -0.54
RNF4-215ENST00000511843 FLNAP21333 2647 aaKnown RBP11.69□□□□□ -0.54
RNF4-215ENST00000511843 OR5H1A6NKK0 313 aa11.69□□□□□ -0.54
RNF4-215ENST00000511843 HS3ST1O14792 307 aa11.69□□□□□ -0.54
RNF4-215ENST00000511843 CNOT4O95628 575 aaKnown RBP11.69□□□□□ -0.54
RNF4-215ENST00000511843 CD99P14209 185 aa11.69□□□□□ -0.54
RNF4-215ENST00000511843 CD247P20963 164 aa11.69□□□□□ -0.54
RNF4-215ENST00000511843 PCGF2P35227 344 aa11.69□□□□□ -0.54
RNF4-215ENST00000511843 MDH1P40925 334 aaKnown RBP11.69□□□□□ -0.54
RNF4-215ENST00000511843 SELENOPP49908 381 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms