RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 REEP3Q6NUK4 255 aa20.22■□□□□ 0.83
SNF8-209ENST00000510558 OR9K2Q8NGE7 335 aa20.22■□□□□ 0.83
SNF8-209ENST00000510558 OR52N5Q8NH56 324 aa20.22■□□□□ 0.83
SNF8-209ENST00000510558 STK35Q8TDR2 534 aa20.22■□□□□ 0.83
SNF8-209ENST00000510558 TMEM45BQ96B21 275 aa20.22■□□□□ 0.83
SNF8-209ENST00000510558 SF3B5Q9BWJ5 86 aaKnown RBP20.22■□□□□ 0.83
SNF8-209ENST00000510558 RSPO3Q9BXY4 272 aaPredicted RBP20.22■□□□□ 0.83
SNF8-209ENST00000510558 TRIM2Q9C040 744 aa20.22■□□□□ 0.83
SNF8-209ENST00000510558 RABEP2Q9H5N1 569 aa20.22■□□□□ 0.83
SNF8-209ENST00000510558 SLC7A10Q9NS82 523 aa20.22■□□□□ 0.83
SNF8-209ENST00000510558 UPB1Q9UBR1 384 aa20.22■□□□□ 0.83
SNF8-209ENST00000510558 H7C1Q1 480 aa20.21■□□□□ 0.83
SNF8-209ENST00000510558 PDLIM1O00151 329 aa20.21■□□□□ 0.83
SNF8-209ENST00000510558 NPIPB7O75200 414 aa20.21■□□□□ 0.83
SNF8-209ENST00000510558 DANCRP0C864 163 aa20.21■□□□□ 0.83
SNF8-209ENST00000510558 GABRA6Q16445 453 aa20.21■□□□□ 0.83
SNF8-209ENST00000510558 TSPO2Q5TGU0 170 aa20.21■□□□□ 0.83
SNF8-209ENST00000510558 OR7E24Q6IFN5 339 aa20.21■□□□□ 0.83
SNF8-209ENST00000510558 GPAT4Q86UL3 456 aa20.21■□□□□ 0.83
SNF8-209ENST00000510558 KRT73Q86Y46 540 aa20.21■□□□□ 0.83
SNF8-209ENST00000510558 ZIC4Q8N9L1 334 aa20.21■□□□□ 0.83
SNF8-209ENST00000510558 SMAP2Q8WU79 429 aaPredicted RBP20.21■□□□□ 0.83
SNF8-209ENST00000510558 COX4I2Q96KJ9 171 aa20.21■□□□□ 0.83
SNF8-209ENST00000510558 MUS81Q96NY9 551 aa20.21■□□□□ 0.83
SNF8-209ENST00000510558 BDH2Q9BUT1 245 aa20.21■□□□□ 0.83
SNF8-209ENST00000510558 CORO2BQ9UQ03 480 aa20.21■□□□□ 0.83
SNF8-209ENST00000510558 SLC25A15Q9Y619 301 aa20.21■□□□□ 0.83
SNF8-209ENST00000510558 A0A1W2PR80 420 aa20.2■□□□□ 0.82
SNF8-209ENST00000510558 EVPLLA8MZ36 301 aa20.2■□□□□ 0.82
SNF8-209ENST00000510558 AHSA1O95433 338 aa20.2■□□□□ 0.82
SNF8-209ENST00000510558 SOD3P08294 240 aa20.2■□□□□ 0.82
SNF8-209ENST00000510558 GPX2P18283 190 aa20.2■□□□□ 0.82
SNF8-209ENST00000510558 P2RY4P51582 365 aa20.2■□□□□ 0.82
SNF8-209ENST00000510558 ATP5J2P56134 94 aa20.2■□□□□ 0.82
SNF8-209ENST00000510558 C9orf135Q5VTT2 229 aa20.2■□□□□ 0.82
SNF8-209ENST00000510558 TMEM225Q6GV28 225 aa20.2■□□□□ 0.82
SNF8-209ENST00000510558 DHRS4L2Q6PKH6 230 aa20.2■□□□□ 0.82
SNF8-209ENST00000510558 DLEU7Q6UYE1 221 aa20.2■□□□□ 0.82
SNF8-209ENST00000510558 CIARTQ8N365 385 aaPredicted RBP20.2■□□□□ 0.82
SNF8-209ENST00000510558 POM121Q96HA1 1249 aa20.2■□□□□ 0.82
SNF8-209ENST00000510558 ZNF385AQ96PM9 386 aaKnown RBP20.2■□□□□ 0.82
SNF8-209ENST00000510558 CPPED1Q9BRF8 314 aaPredicted RBP20.2■□□□□ 0.82
SNF8-209ENST00000510558 SPATA5L1Q9BVQ7 753 aa20.2■□□□□ 0.82
SNF8-209ENST00000510558 AMBRA1Q9C0C7 1298 aa20.2■□□□□ 0.82
SNF8-209ENST00000510558 PIF1Q9H611 641 aa20.2■□□□□ 0.82
SNF8-209ENST00000510558 ZNF385DQ9H6B1 395 aa20.2■□□□□ 0.82
SNF8-209ENST00000510558 TMEM38AQ9H6F2 299 aa20.2■□□□□ 0.82
SNF8-209ENST00000510558 RPS6KB2Q9UBS0 482 aa20.2■□□□□ 0.82
SNF8-209ENST00000510558 LEF1Q9UJU2 399 aaPredicted RBP20.2■□□□□ 0.82
SNF8-209ENST00000510558 DCTN4Q9UJW0 460 aa20.2■□□□□ 0.82
SNF8-209ENST00000510558 TRIM64A6NGJ6 449 aa20.19■□□□□ 0.82
SNF8-209ENST00000510558 TRIM64BA6NI03 449 aa20.19■□□□□ 0.82
SNF8-209ENST00000510558 ELOA3DA6NLF2 546 aaPredicted RBP20.19■□□□□ 0.82
SNF8-209ENST00000510558 SHISA9B4DS77 424 aa20.19■□□□□ 0.82
SNF8-209ENST00000510558 ABCD4O14678 606 aa20.19■□□□□ 0.82
SNF8-209ENST00000510558 EDF1O60869 148 aaKnown RBP20.19■□□□□ 0.82
SNF8-209ENST00000510558 SCARB2Q14108 478 aa20.19■□□□□ 0.82
SNF8-209ENST00000510558 ELOA3BQ3SY89 546 aa20.19■□□□□ 0.82
SNF8-209ENST00000510558 AAED1Q7RTV5 226 aa20.19■□□□□ 0.82
SNF8-209ENST00000510558 COMTD1Q86VU5 262 aa20.19■□□□□ 0.82
SNF8-209ENST00000510558 ELOA3Q8NG57 546 aa20.19■□□□□ 0.82
SNF8-209ENST00000510558 SLCO5A1Q9H2Y9 848 aa20.19■□□□□ 0.82
SNF8-209ENST00000510558 NPHS2Q9NP85 383 aa20.19■□□□□ 0.82
SNF8-209ENST00000510558 TRIM33Q9UPN9 1127 aa20.19■□□□□ 0.82
SNF8-209ENST00000510558 HEATR1Q9H583 2144 aaKnown RBP20.18■□□□□ 0.82
SNF8-209ENST00000510558 PLCE1Q9P212 2302 aa20.18■□□□□ 0.82
SNF8-209ENST00000510558 OVOL3O00110 214 aa20.18■□□□□ 0.82
SNF8-209ENST00000510558 TPST1O60507 370 aa20.18■□□□□ 0.82
SNF8-209ENST00000510558 SASH3O75995 380 aa20.18■□□□□ 0.82
SNF8-209ENST00000510558 VAMP5O95183 116 aa20.18■□□□□ 0.82
SNF8-209ENST00000510558 SLC6A2P23975 617 aa20.18■□□□□ 0.82
SNF8-209ENST00000510558 ZNF83P51522 516 aa20.18■□□□□ 0.82
SNF8-209ENST00000510558 CDH11P55287 796 aa20.18■□□□□ 0.82
SNF8-209ENST00000510558 EGR4Q05215 589 aa20.18■□□□□ 0.82
SNF8-209ENST00000510558 ADRM1Q16186 407 aa20.18■□□□□ 0.82
SNF8-209ENST00000510558 PGGHGQ32M88 737 aa20.18■□□□□ 0.82
SNF8-209ENST00000510558 GLIPR1L2Q4G1C9 344 aa20.18■□□□□ 0.82
SNF8-209ENST00000510558 RUNDC3AQ59EK9 446 aa20.18■□□□□ 0.82
SNF8-209ENST00000510558 C6orf89Q6UWU4 347 aa20.18■□□□□ 0.82
SNF8-209ENST00000510558 TMEM108Q6UXF1 575 aa20.18■□□□□ 0.82
SNF8-209ENST00000510558 CLEC9AQ6UXN8 241 aa20.18■□□□□ 0.82
SNF8-209ENST00000510558 Q71RC1 249 aaPredicted RBP20.18■□□□□ 0.82
SNF8-209ENST00000510558 C1orf162Q8NEQ5 155 aaPredicted RBP20.18■□□□□ 0.82
SNF8-209ENST00000510558 MFSD8Q8NHS3 518 aa20.18■□□□□ 0.82
SNF8-209ENST00000510558 PTDSS2Q9BVG9 487 aa20.18■□□□□ 0.82
SNF8-209ENST00000510558 C12orf10Q9HB07 376 aa20.18■□□□□ 0.82
SNF8-209ENST00000510558 CISD1Q9NZ45 108 aaKnown RBP20.18■□□□□ 0.82
SNF8-209ENST00000510558 MAGED1Q9Y5V3 778 aaPredicted RBP20.18■□□□□ 0.82
SNF8-209ENST00000510558 FTCDNL1E5RQL4 147 aa20.17■□□□□ 0.82
SNF8-209ENST00000510558 HTR2AP28223 471 aa20.17■□□□□ 0.82
SNF8-209ENST00000510558 MPGP29372 298 aa20.17■□□□□ 0.82
SNF8-209ENST00000510558 RPS5P46782 204 aaKnown RBP20.17■□□□□ 0.82
SNF8-209ENST00000510558 TGFBR3Q03167 851 aa20.17■□□□□ 0.82
SNF8-209ENST00000510558 KLHL17Q6TDP4 642 aa20.17■□□□□ 0.82
SNF8-209ENST00000510558 DHDDSQ86SQ9 333 aa20.17■□□□□ 0.82
SNF8-209ENST00000510558 C17orf78Q8N4C9 275 aa20.17■□□□□ 0.82
SNF8-209ENST00000510558 LSMEM1Q8N8F7 131 aa20.17■□□□□ 0.82
SNF8-209ENST00000510558 WDR31Q8NA23 367 aa20.17■□□□□ 0.82
SNF8-209ENST00000510558 POMGNT2Q8NAT1 580 aa20.17■□□□□ 0.82
SNF8-209ENST00000510558 HIPK4Q8NE63 616 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms