RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 PRPS1P60891 318 aa13.83□□□□□ -0.2
RAB40C-202ENST00000509637 ABCE1P61221 599 aaKnown RBP13.83□□□□□ -0.2
RAB40C-202ENST00000509637 MAD2L1Q13257 205 aaPredicted RBP13.83□□□□□ -0.2
RAB40C-202ENST00000509637 OR7A5Q15622 319 aa13.83□□□□□ -0.2
RAB40C-202ENST00000509637 CHI3L2Q15782 390 aa13.83□□□□□ -0.2
RAB40C-202ENST00000509637 ZSWIM7Q19AV6 140 aa13.83□□□□□ -0.2
RAB40C-202ENST00000509637 LRRC74BQ6ZQY2 392 aa13.83□□□□□ -0.2
RAB40C-202ENST00000509637 NUDCD3Q8IVD9 361 aa13.83□□□□□ -0.2
RAB40C-202ENST00000509637 DEPDC4Q8N2C3 294 aa13.83□□□□□ -0.2
RAB40C-202ENST00000509637 KDM8Q8N371 416 aa13.83□□□□□ -0.2
RAB40C-202ENST00000509637 CLIP4Q8N3C7 705 aa13.83□□□□□ -0.2
RAB40C-202ENST00000509637 RIBC1Q8N443 379 aaPredicted RBP13.83□□□□□ -0.2
RAB40C-202ENST00000509637 OR1K1Q8NGR3 316 aa13.83□□□□□ -0.2
RAB40C-202ENST00000509637 PNPT1Q8TCS8 783 aaKnown RBP13.83□□□□□ -0.2
RAB40C-202ENST00000509637 ZNF837Q96EG3 531 aaPredicted RBP13.83□□□□□ -0.2
RAB40C-202ENST00000509637 TRNT1Q96Q11 434 aaKnown RBP13.83□□□□□ -0.2
RAB40C-202ENST00000509637 NUF2Q9BZD4 464 aa13.83□□□□□ -0.2
RAB40C-202ENST00000509637 BPESC1Q9GZL8 116 aa13.83□□□□□ -0.2
RAB40C-202ENST00000509637 SEC14L4Q9UDX3 406 aa13.83□□□□□ -0.2
RAB40C-202ENST00000509637 CCDC154A6NI56 674 aa13.82□□□□□ -0.2
RAB40C-202ENST00000509637 TMEM229AB2RXF0 380 aa13.82□□□□□ -0.2
RAB40C-202ENST00000509637 EIF1BO60739 113 aaKnown RBP13.82□□□□□ -0.2
RAB40C-202ENST00000509637 NPIPB7O75200 414 aa13.82□□□□□ -0.2
RAB40C-202ENST00000509637 AGR2O95994 175 aa13.82□□□□□ -0.2
RAB40C-202ENST00000509637 GZMKP49863 264 aa13.82□□□□□ -0.2
RAB40C-202ENST00000509637 CHRNB3Q05901 458 aa13.82□□□□□ -0.2
RAB40C-202ENST00000509637 ANXA8L1Q5VT79 327 aa13.82□□□□□ -0.2
RAB40C-202ENST00000509637 ANKRD16Q6P6B7 361 aa13.82□□□□□ -0.2
RAB40C-202ENST00000509637 ZNF836Q6ZNA1 936 aa13.82□□□□□ -0.2
RAB40C-202ENST00000509637 CREB3L2Q70SY1 520 aa13.82□□□□□ -0.2
RAB40C-202ENST00000509637 WDFY1Q8IWB7 410 aa13.82□□□□□ -0.2
RAB40C-202ENST00000509637 HOMEZQ8IX15 550 aa13.82□□□□□ -0.2
RAB40C-202ENST00000509637 PMM1Q92871 262 aa13.82□□□□□ -0.2
RAB40C-202ENST00000509637 DDIT4LQ96D03 193 aa13.82□□□□□ -0.2
RAB40C-202ENST00000509637 ZIM3Q96PE6 472 aa13.82□□□□□ -0.2
RAB40C-202ENST00000509637 SLC38A2Q96QD8 506 aa13.82□□□□□ -0.2
RAB40C-202ENST00000509637 NAA11Q9BSU3 229 aaPredicted RBP13.82□□□□□ -0.2
RAB40C-202ENST00000509637 CA10Q9NS85 328 aa13.82□□□□□ -0.2
RAB40C-202ENST00000509637 PARPBPQ9NWS1 579 aa13.82□□□□□ -0.2
RAB40C-202ENST00000509637 CRNNQ9UBG3 495 aaPredicted RBP13.82□□□□□ -0.2
RAB40C-202ENST00000509637 LPAR3Q9UBY5 353 aa13.82□□□□□ -0.2
RAB40C-202ENST00000509637 BTNL2Q9UIR0 455 aa13.82□□□□□ -0.2
RAB40C-202ENST00000509637 HAO1Q9UJM8 370 aa13.82□□□□□ -0.2
RAB40C-202ENST00000509637 PMF1-BGLAPU3KQ54 211 aa13.82□□□□□ -0.2
RAB40C-202ENST00000509637 A0A096LPE4 126 aa13.81□□□□□ -0.2
RAB40C-202ENST00000509637 A0A1W2PPZ6 126 aa13.81□□□□□ -0.2
RAB40C-202ENST00000509637 CFAP73A6NFT4 308 aa13.81□□□□□ -0.2
RAB40C-202ENST00000509637 SDHDO14521 159 aa13.81□□□□□ -0.2
RAB40C-202ENST00000509637 LILRA1O75019 489 aa13.81□□□□□ -0.2
RAB40C-202ENST00000509637 IGLV1-44P01699 117 aa13.81□□□□□ -0.2
RAB40C-202ENST00000509637 SERPINE1P05121 402 aa13.81□□□□□ -0.2
RAB40C-202ENST00000509637 CSF3P09919 207 aa13.81□□□□□ -0.2
RAB40C-202ENST00000509637 CECR9P0C854 216 aa13.81□□□□□ -0.2
RAB40C-202ENST00000509637 SRD5A1P18405 259 aa13.81□□□□□ -0.2
RAB40C-202ENST00000509637 FKBP2P26885 142 aaKnown RBP13.81□□□□□ -0.2
RAB40C-202ENST00000509637 CHI3L1P36222 383 aaPredicted RBP13.81□□□□□ -0.2
RAB40C-202ENST00000509637 SERPINF1P36955 418 aa13.81□□□□□ -0.2
RAB40C-202ENST00000509637 HTR3AP46098 478 aa13.81□□□□□ -0.2
RAB40C-202ENST00000509637 NAAAQ02083 359 aa13.81□□□□□ -0.2
RAB40C-202ENST00000509637 GTDC1Q4AE62 458 aa13.81□□□□□ -0.2
RAB40C-202ENST00000509637 FAM166AQ6J272 317 aa13.81□□□□□ -0.2
RAB40C-202ENST00000509637 CMIPQ8IY22 773 aa13.81□□□□□ -0.2
RAB40C-202ENST00000509637 AENQ8WTP8 325 aaKnown RBP13.81□□□□□ -0.2
RAB40C-202ENST00000509637 WDR60Q8WVS4 1066 aa13.81□□□□□ -0.2
RAB40C-202ENST00000509637 ALKBH3Q96Q83 286 aaPredicted RBP13.81□□□□□ -0.2
RAB40C-202ENST00000509637 DOK1Q99704 481 aa13.81□□□□□ -0.2
RAB40C-202ENST00000509637 VRK1Q99986 396 aaPredicted RBP13.81□□□□□ -0.2
RAB40C-202ENST00000509637 PTDSS2Q9BVG9 487 aa13.81□□□□□ -0.2
RAB40C-202ENST00000509637 SF3B5Q9BWJ5 86 aaKnown RBP13.81□□□□□ -0.2
RAB40C-202ENST00000509637 PLK3Q9H4B4 646 aa13.81□□□□□ -0.2
RAB40C-202ENST00000509637 MTHFD2LQ9H903 347 aaPredicted RBP13.81□□□□□ -0.2
RAB40C-202ENST00000509637 RAP2CQ9Y3L5 183 aa13.81□□□□□ -0.2
RAB40C-202ENST00000509637 CDHR4A6H8M9 788 aa13.8□□□□□ -0.2
RAB40C-202ENST00000509637 FTCDNL1E5RQL4 147 aa13.8□□□□□ -0.2
RAB40C-202ENST00000509637 E9PBE3 544 aa13.8□□□□□ -0.2
RAB40C-202ENST00000509637 LYNX1G3V0Z9 82 aa13.8□□□□□ -0.2
RAB40C-202ENST00000509637 FRS3O43559 492 aa13.8□□□□□ -0.2
RAB40C-202ENST00000509637 STAMBPO95630 424 aa13.8□□□□□ -0.2
RAB40C-202ENST00000509637 OR4A8P0C604 315 aa13.8□□□□□ -0.2
RAB40C-202ENST00000509637 LYNX1P0DP58 116 aa13.8□□□□□ -0.2
RAB40C-202ENST00000509637 APEHP13798 732 aaKnown RBP13.8□□□□□ -0.2
RAB40C-202ENST00000509637 LBPP18428 481 aa13.8□□□□□ -0.2
RAB40C-202ENST00000509637 BGNP21810 368 aa13.8□□□□□ -0.2
RAB40C-202ENST00000509637 S100A3P33764 101 aa13.8□□□□□ -0.2
RAB40C-202ENST00000509637 SLC1A6P48664 564 aa13.8□□□□□ -0.2
RAB40C-202ENST00000509637 RPL14P50914 215 aaKnown RBP13.8□□□□□ -0.2
RAB40C-202ENST00000509637 EGR4Q05215 589 aa13.8□□□□□ -0.2
RAB40C-202ENST00000509637 CARTPTQ16568 116 aa13.8□□□□□ -0.2
RAB40C-202ENST00000509637 CR1LQ2VPA4 569 aa13.8□□□□□ -0.2
RAB40C-202ENST00000509637 RPS26P11Q5JNZ5 115 aaPredicted RBP13.8□□□□□ -0.2
RAB40C-202ENST00000509637 VHLLQ6RSH7 139 aa13.8□□□□□ -0.2
RAB40C-202ENST00000509637 SPATA19Q7Z5L4 167 aa13.8□□□□□ -0.2
RAB40C-202ENST00000509637 ROPN1BQ9BZX4 212 aaPredicted RBP13.8□□□□□ -0.2
RAB40C-202ENST00000509637 MEAF6Q9HAF1 191 aa13.8□□□□□ -0.2
RAB40C-202ENST00000509637 ROPN1Q9HAT0 212 aaPredicted RBP13.8□□□□□ -0.2
RAB40C-202ENST00000509637 AIG1Q9NVV5 245 aa13.8□□□□□ -0.2
RAB40C-202ENST00000509637 ADPRHL2Q9NX46 363 aa13.8□□□□□ -0.2
RAB40C-202ENST00000509637 KCNS2Q9ULS6 477 aa13.8□□□□□ -0.2
RAB40C-202ENST00000509637 GPR45Q9Y5Y3 372 aa13.8□□□□□ -0.2
RAB40C-202ENST00000509637 DSPPQ9NZW4 1301 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms