RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 IGF2P01344 180 aa8.16□□□□□ -1.1
NUP54-207ENST00000508583 T-ENOLP0DO92 83 aa8.16□□□□□ -1.1
NUP54-207ENST00000508583 NCK1P16333 377 aa8.16□□□□□ -1.1
NUP54-207ENST00000508583 FPR1P21462 350 aa8.16□□□□□ -1.1
NUP54-207ENST00000508583 AGTR1P30556 359 aa8.16□□□□□ -1.1
NUP54-207ENST00000508583 OR1E2P47887 323 aa8.16□□□□□ -1.1
NUP54-207ENST00000508583 SLC16A1P53985 500 aa8.16□□□□□ -1.1
NUP54-207ENST00000508583 SMIM11AP58511 58 aa8.16□□□□□ -1.1
NUP54-207ENST00000508583 H3F3AP84243 136 aa8.16□□□□□ -1.1
NUP54-207ENST00000508583 SORDQ00796 357 aa8.16□□□□□ -1.1
NUP54-207ENST00000508583 CEACAM7Q14002 265 aa8.16□□□□□ -1.1
NUP54-207ENST00000508583 TRIM25Q14258 630 aaKnown RBP8.16□□□□□ -1.1
NUP54-207ENST00000508583 GUSBP1Q15486 140 aa8.16□□□□□ -1.1
NUP54-207ENST00000508583 OTUD3Q5T2D3 398 aaPredicted RBP8.16□□□□□ -1.1
NUP54-207ENST00000508583 TMEM225Q6GV28 225 aa8.16□□□□□ -1.1
NUP54-207ENST00000508583 ABLIM2Q6H8Q1 611 aa8.16□□□□□ -1.1
NUP54-207ENST00000508583 RINLQ6ZS11 566 aa8.16□□□□□ -1.1
NUP54-207ENST00000508583 GALNT5Q7Z7M9 940 aa8.16□□□□□ -1.1
NUP54-207ENST00000508583 DHFR2Q86XF0 187 aa8.16□□□□□ -1.1
NUP54-207ENST00000508583 OFCC1Q8IZS5 231 aa8.16□□□□□ -1.1
NUP54-207ENST00000508583 C10orf53Q8N6V4 93 aa8.16□□□□□ -1.1
NUP54-207ENST00000508583 SCAIQ8N9R8 606 aa8.16□□□□□ -1.1
NUP54-207ENST00000508583 NAXEQ8NCW5 288 aa8.16□□□□□ -1.1
NUP54-207ENST00000508583 ABHD3Q8WU67 409 aa8.16□□□□□ -1.1
NUP54-207ENST00000508583 ROBO4Q8WZ75 1007 aa8.16□□□□□ -1.1
NUP54-207ENST00000508583 RNASE6Q93091 150 aaKnown RBP8.16□□□□□ -1.1
NUP54-207ENST00000508583 BTBD10Q9BSF8 475 aa8.16□□□□□ -1.1
NUP54-207ENST00000508583 THTPAQ9BU02 230 aa8.16□□□□□ -1.1
NUP54-207ENST00000508583 FNDC11Q9BVV2 318 aa8.16□□□□□ -1.1
NUP54-207ENST00000508583 ASPNQ9BXN1 380 aa8.16□□□□□ -1.1
NUP54-207ENST00000508583 ANKRD19PQ9H560 264 aa8.16□□□□□ -1.1
NUP54-207ENST00000508583 KIAA1549Q9HCM3 1950 aa8.16□□□□□ -1.1
NUP54-207ENST00000508583 PARPBPQ9NWS1 579 aa8.16□□□□□ -1.1
NUP54-207ENST00000508583 ELOVL5Q9NYP7 299 aa8.16□□□□□ -1.1
NUP54-207ENST00000508583 RIMS3Q9UJD0 308 aa8.16□□□□□ -1.1
NUP54-207ENST00000508583 SLC7A7Q9UM01 511 aa8.16□□□□□ -1.1
NUP54-207ENST00000508583 RASD1Q9Y272 281 aa8.16□□□□□ -1.1
NUP54-207ENST00000508583 ENPP4Q9Y6X5 453 aa8.16□□□□□ -1.1
NUP54-207ENST00000508583 USP9YO00507 2555 aaPredicted RBP8.15□□□□□ -1.1
NUP54-207ENST00000508583 IGHV3-15A0A0B4J1V0 119 aa8.15□□□□□ -1.1
NUP54-207ENST00000508583 ZC3H12DA2A288 527 aaKnown RBP8.15□□□□□ -1.1
NUP54-207ENST00000508583 OR6C65A6NJZ3 312 aa8.15□□□□□ -1.1
NUP54-207ENST00000508583 AQP7P3A6NL99 342 aa8.15□□□□□ -1.1
NUP54-207ENST00000508583 A8MXE2 369 aa8.15□□□□□ -1.1
NUP54-207ENST00000508583 KDM4EB2RXH2 506 aaPredicted RBP8.15□□□□□ -1.1
NUP54-207ENST00000508583 SMAD9O15198 467 aaKnown RBP8.15□□□□□ -1.1
NUP54-207ENST00000508583 AKAP8O43823 692 aaKnown RBP8.15□□□□□ -1.1
NUP54-207ENST00000508583 TPST2O60704 377 aa8.15□□□□□ -1.1
NUP54-207ENST00000508583 DNAJC8O75937 253 aaPredicted RBP8.15□□□□□ -1.1
NUP54-207ENST00000508583 HIST1H2ABP04908 130 aa8.15□□□□□ -1.1
NUP54-207ENST00000508583 COX6B1P14854 86 aa8.15□□□□□ -1.1
NUP54-207ENST00000508583 NQO1P15559 274 aaKnown RBP8.15□□□□□ -1.1
NUP54-207ENST00000508583 RHCEP18577 417 aa8.15□□□□□ -1.1
NUP54-207ENST00000508583 KIR2DL2P43627 348 aaPredicted RBP8.15□□□□□ -1.1
NUP54-207ENST00000508583 RPS5P46782 204 aaKnown RBP8.15□□□□□ -1.1
NUP54-207ENST00000508583 SIRPAP78324 504 aa8.15□□□□□ -1.1
NUP54-207ENST00000508583 TRAP1Q12931 704 aaKnown RBP8.15□□□□□ -1.1
NUP54-207ENST00000508583 FOXF2Q12947 444 aa8.15□□□□□ -1.1
NUP54-207ENST00000508583 BNIP1Q12981 228 aa8.15□□□□□ -1.1
NUP54-207ENST00000508583 TRAM2Q15035 370 aa8.15□□□□□ -1.1
NUP54-207ENST00000508583 TAF11Q15544 211 aa8.15□□□□□ -1.1
NUP54-207ENST00000508583 LCN8Q6JVE9 175 aa8.15□□□□□ -1.1
NUP54-207ENST00000508583 BEND4Q6ZU67 534 aa8.15□□□□□ -1.1
NUP54-207ENST00000508583 CCDC121Q6ZUS5 278 aa8.15□□□□□ -1.1
NUP54-207ENST00000508583 HIST3H2AQ7L7L0 130 aa8.15□□□□□ -1.1
NUP54-207ENST00000508583 RRM2BQ7LG56 351 aa8.15□□□□□ -1.1
NUP54-207ENST00000508583 VTCN1Q7Z7D3 282 aa8.15□□□□□ -1.1
NUP54-207ENST00000508583 CDK20Q8IZL9 346 aa8.15□□□□□ -1.1
NUP54-207ENST00000508583 RELL2Q8NC24 303 aaPredicted RBP8.15□□□□□ -1.1
NUP54-207ENST00000508583 FAM156AQ8NDB6 213 aa8.15□□□□□ -1.1
NUP54-207ENST00000508583 ADPRHL1Q8NDY3 354 aa8.15□□□□□ -1.1
NUP54-207ENST00000508583 HIST1H2ACQ93077 130 aa8.15□□□□□ -1.1
NUP54-207ENST00000508583 SLC25A36Q96CQ1 311 aa8.15□□□□□ -1.1
NUP54-207ENST00000508583 CCDC124Q96CT7 223 aaKnown RBP8.15□□□□□ -1.1
NUP54-207ENST00000508583 STARD4Q96DR4 205 aa8.15□□□□□ -1.1
NUP54-207ENST00000508583 PYURFQ96I23 114 aa8.15□□□□□ -1.1
NUP54-207ENST00000508583 ZNF347Q96SE7 839 aa8.15□□□□□ -1.1
NUP54-207ENST00000508583 SPOCK3Q9BQ16 436 aa8.15□□□□□ -1.1
NUP54-207ENST00000508583 USB1Q9BQ65 265 aaKnown RBP8.15□□□□□ -1.1
NUP54-207ENST00000508583 PSD2Q9BQI7 771 aa8.15□□□□□ -1.1
NUP54-207ENST00000508583 ZNF426Q9BUY5 554 aa8.15□□□□□ -1.1
NUP54-207ENST00000508583 RBM24Q9BX46 236 aaKnown RBP8.15□□□□□ -1.1
NUP54-207ENST00000508583 NDEL1Q9GZM8 345 aa8.15□□□□□ -1.1
NUP54-207ENST00000508583 MAGIXQ9H6Y5 334 aa8.15□□□□□ -1.1
NUP54-207ENST00000508583 FKRPQ9H9S5 495 aa8.15□□□□□ -1.1
NUP54-207ENST00000508583 NANSQ9NR45 359 aa8.15□□□□□ -1.1
NUP54-207ENST00000508583 PLSCR4Q9NRQ2 329 aa8.15□□□□□ -1.1
NUP54-207ENST00000508583 JKAMPQ9P055 326 aa8.15□□□□□ -1.1
NUP54-207ENST00000508583 NOSIPQ9Y314 301 aaKnown RBP8.15□□□□□ -1.1
NUP54-207ENST00000508583 MED31Q9Y3C7 131 aa8.15□□□□□ -1.1
NUP54-207ENST00000508583 PTPN13Q12923 2485 aa8.15□□□□□ -1.1
NUP54-207ENST00000508583 ASH1LQ9NR48 2969 aaKnown RBP8.14□□□□□ -1.11
NUP54-207ENST00000508583 NKX2-6A6NCS4 301 aa8.14□□□□□ -1.11
NUP54-207ENST00000508583 EBAG9O00559 213 aa8.14□□□□□ -1.11
NUP54-207ENST00000508583 HNRNPRO43390 633 aaKnown RBP8.14□□□□□ -1.11
NUP54-207ENST00000508583 FZD7O75084 574 aa8.14□□□□□ -1.11
NUP54-207ENST00000508583 MRPL33O75394 65 aaKnown RBP8.14□□□□□ -1.11
NUP54-207ENST00000508583 OR6A2O95222 327 aa8.14□□□□□ -1.11
NUP54-207ENST00000508583 CLDN1O95832 211 aa8.14□□□□□ -1.11
NUP54-207ENST00000508583 MT-ND1P03886 318 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms