RNA–Protein interactions for RNA: ENST00000508387.5

NR1I3-225, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 634 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-225ENST00000508387 SELENOPP49908 381 aa11.26□□□□□ -0.61
NR1I3-225ENST00000508387 FADDQ13158 208 aa11.26□□□□□ -0.61
NR1I3-225ENST00000508387 GCNT6Q5T4J0 391 aa11.26□□□□□ -0.61
NR1I3-225ENST00000508387 C1orf140Q5VVS0 124 aa11.26□□□□□ -0.61
NR1I3-225ENST00000508387 PRSS57Q6UWY2 283 aa11.26□□□□□ -0.61
NR1I3-225ENST00000508387 LINGO2Q7L985 606 aa11.26□□□□□ -0.61
NR1I3-225ENST00000508387 GPAT4Q86UL3 456 aa11.26□□□□□ -0.61
NR1I3-225ENST00000508387 PIAS4Q8N2W9 510 aaPredicted RBP11.26□□□□□ -0.61
NR1I3-225ENST00000508387 KDM8Q8N371 416 aa11.26□□□□□ -0.61
NR1I3-225ENST00000508387 SMAP2Q8WU79 429 aaPredicted RBP11.26□□□□□ -0.61
NR1I3-225ENST00000508387 PMM1Q92871 262 aa11.26□□□□□ -0.61
NR1I3-225ENST00000508387 CPPED1Q9BRF8 314 aaPredicted RBP11.26□□□□□ -0.61
NR1I3-225ENST00000508387 NAA11Q9BSU3 229 aaPredicted RBP11.26□□□□□ -0.61
NR1I3-225ENST00000508387 CXorf56Q9H5V9 222 aa11.26□□□□□ -0.61
NR1I3-225ENST00000508387 ZNF385DQ9H6B1 395 aa11.26□□□□□ -0.61
NR1I3-225ENST00000508387 BCL2L10Q9HD36 194 aa11.26□□□□□ -0.61
NR1I3-225ENST00000508387 INTS9Q9NV88 658 aaKnown RBP11.26□□□□□ -0.61
NR1I3-225ENST00000508387 TAS2R16Q9NYV7 291 aa11.26□□□□□ -0.61
NR1I3-225ENST00000508387 DCTN4Q9UJW0 460 aa11.26□□□□□ -0.61
NR1I3-225ENST00000508387 SLC9A8Q9Y2E8 581 aa11.26□□□□□ -0.61
NR1I3-225ENST00000508387 IGKV1D-42A0A075B6H8 117 aa11.25□□□□□ -0.61
NR1I3-225ENST00000508387 A0A1W2PP18 115 aa11.25□□□□□ -0.61
NR1I3-225ENST00000508387 A8MVM7 634 aa11.25□□□□□ -0.61
NR1I3-225ENST00000508387 C5orf58C9J3I9 102 aa11.25□□□□□ -0.61
NR1I3-225ENST00000508387 FTCDNL1E5RQL4 147 aa11.25□□□□□ -0.61
NR1I3-225ENST00000508387 OVOL3O00110 214 aa11.25□□□□□ -0.61
NR1I3-225ENST00000508387 GPR171O14626 319 aa11.25□□□□□ -0.61
NR1I3-225ENST00000508387 EIF1BO60739 113 aaKnown RBP11.25□□□□□ -0.61
NR1I3-225ENST00000508387 NPIPB7O75200 414 aa11.25□□□□□ -0.61
NR1I3-225ENST00000508387 HEXAP06865 529 aa11.25□□□□□ -0.61
NR1I3-225ENST00000508387 H2AFXP16104 143 aaPredicted RBP11.25□□□□□ -0.61
NR1I3-225ENST00000508387 CDH2P19022 906 aaPredicted RBP11.25□□□□□ -0.61
NR1I3-225ENST00000508387 CBLP22681 906 aa11.25□□□□□ -0.61
NR1I3-225ENST00000508387 RPS5P46782 204 aaKnown RBP11.25□□□□□ -0.61
NR1I3-225ENST00000508387 COPZ1P61923 177 aa11.25□□□□□ -0.61
NR1I3-225ENST00000508387 SF3A3Q12874 501 aaKnown RBP eCLIP11.25□□□□□ -0.61
NR1I3-225ENST00000508387 TNK1Q13470 666 aa11.25□□□□□ -0.61
NR1I3-225ENST00000508387 SQLEQ14534 574 aa11.25□□□□□ -0.61
NR1I3-225ENST00000508387 ADRM1Q16186 407 aa11.25□□□□□ -0.61
NR1I3-225ENST00000508387 DLEU7Q6UYE1 221 aa11.25□□□□□ -0.61
NR1I3-225ENST00000508387 RETREG3Q86VR2 466 aa11.25□□□□□ -0.61
NR1I3-225ENST00000508387 CKAP2Q8WWK9 683 aa11.25□□□□□ -0.61
NR1I3-225ENST00000508387 HTRA1Q92743 480 aa11.25□□□□□ -0.61
NR1I3-225ENST00000508387 TMEM45BQ96B21 275 aa11.25□□□□□ -0.61
NR1I3-225ENST00000508387 SLC25A36Q96CQ1 311 aa11.25□□□□□ -0.61
NR1I3-225ENST00000508387 MUCL1Q96DR8 90 aa11.25□□□□□ -0.61
NR1I3-225ENST00000508387 KTI12Q96EK9 354 aaPredicted RBP11.25□□□□□ -0.61
NR1I3-225ENST00000508387 ALKBH3Q96Q83 286 aaPredicted RBP11.25□□□□□ -0.61
NR1I3-225ENST00000508387 TRAF4Q9BUZ4 470 aaPredicted RBP11.25□□□□□ -0.61
NR1I3-225ENST00000508387 AMBRA1Q9C0C7 1298 aa11.25□□□□□ -0.61
NR1I3-225ENST00000508387 NGBQ9NPG2 151 aa11.25□□□□□ -0.61
NR1I3-225ENST00000508387 CISD1Q9NZ45 108 aaKnown RBP11.25□□□□□ -0.61
NR1I3-225ENST00000508387 UPB1Q9UBR1 384 aa11.25□□□□□ -0.61
NR1I3-225ENST00000508387 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.25□□□□□ -0.61
NR1I3-225ENST00000508387 IFT52Q9Y366 437 aa11.25□□□□□ -0.61
NR1I3-225ENST00000508387 A0A1B0GWA3 101 aa11.24□□□□□ -0.61
NR1I3-225ENST00000508387 TMEM247A6NEH6 219 aa11.24□□□□□ -0.61
NR1I3-225ENST00000508387 HMGB1P1B2RPK0 211 aaPredicted RBP11.24□□□□□ -0.61
NR1I3-225ENST00000508387 E7EQL1 145 aa11.24□□□□□ -0.61
NR1I3-225ENST00000508387 TPST2O60704 377 aa11.24□□□□□ -0.61
NR1I3-225ENST00000508387 IGHV4-39P01824 125 aa11.24□□□□□ -0.61
NR1I3-225ENST00000508387 PNMTP11086 282 aa11.24□□□□□ -0.61
NR1I3-225ENST00000508387 CD40P25942 277 aa11.24□□□□□ -0.61
NR1I3-225ENST00000508387 FKBP2P26885 142 aaKnown RBP11.24□□□□□ -0.61
NR1I3-225ENST00000508387 ACVR1BP36896 505 aa11.24□□□□□ -0.61
NR1I3-225ENST00000508387 MTPNP58546 118 aa11.24□□□□□ -0.61
NR1I3-225ENST00000508387 TUBA1BP68363 451 aa11.24□□□□□ -0.61
NR1I3-225ENST00000508387 TUBA4AP68366 448 aa11.24□□□□□ -0.61
NR1I3-225ENST00000508387 CDK6Q00534 326 aa11.24□□□□□ -0.61
NR1I3-225ENST00000508387 KRTAP1-1Q07627 177 aa11.24□□□□□ -0.61
NR1I3-225ENST00000508387 SCARB2Q14108 478 aa11.24□□□□□ -0.61
NR1I3-225ENST00000508387 HIKESHIQ53FT3 197 aa11.24□□□□□ -0.61
NR1I3-225ENST00000508387 PRAMEF8Q5VWM4 474 aa11.24□□□□□ -0.61
NR1I3-225ENST00000508387 PRAMEF7Q5VXH5 474 aa11.24□□□□□ -0.61
NR1I3-225ENST00000508387 TUBA1AQ71U36 451 aa11.24□□□□□ -0.61
NR1I3-225ENST00000508387 AAED1Q7RTV5 226 aa11.24□□□□□ -0.61
NR1I3-225ENST00000508387 PTOV1Q86YD1 416 aa11.24□□□□□ -0.61
NR1I3-225ENST00000508387 EPHX4Q8IUS5 362 aa11.24□□□□□ -0.61
NR1I3-225ENST00000508387 WDFY1Q8IWB7 410 aa11.24□□□□□ -0.61
NR1I3-225ENST00000508387 MAGEB18Q96M61 343 aa11.24□□□□□ -0.61
NR1I3-225ENST00000508387 MUS81Q96NY9 551 aa11.24□□□□□ -0.61
NR1I3-225ENST00000508387 TAPBPLQ9BX59 468 aa11.24□□□□□ -0.61
NR1I3-225ENST00000508387 SLCO5A1Q9H2Y9 848 aa11.24□□□□□ -0.61
NR1I3-225ENST00000508387 RAD21L1Q9H4I0 556 aa11.24□□□□□ -0.61
NR1I3-225ENST00000508387 NPHS2Q9NP85 383 aa11.24□□□□□ -0.61
NR1I3-225ENST00000508387 SLC17A5Q9NRA2 495 aa11.24□□□□□ -0.61
NR1I3-225ENST00000508387 THUMPD1Q9NXG2 353 aaKnown RBP11.24□□□□□ -0.61
NR1I3-225ENST00000508387 NIPBLQ6KC79 2804 aaeCLIP11.23□□□□□ -0.61
NR1I3-225ENST00000508387 CR1P17927 2039 aa11.23□□□□□ -0.61
NR1I3-225ENST00000508387 ROS1P08922 2347 aa11.23□□□□□ -0.61
NR1I3-225ENST00000508387 RNF223E7ERA6 249 aa11.23□□□□□ -0.61
NR1I3-225ENST00000508387 UPK3AO75631 287 aa11.23□□□□□ -0.61
NR1I3-225ENST00000508387 AHSA1O95433 338 aa11.23□□□□□ -0.61
NR1I3-225ENST00000508387 LGI1O95970 557 aa11.23□□□□□ -0.61
NR1I3-225ENST00000508387 OPN1SWP03999 348 aa11.23□□□□□ -0.61
NR1I3-225ENST00000508387 ETS2P15036 469 aa11.23□□□□□ -0.61
NR1I3-225ENST00000508387 PCSK6P29122 969 aa11.23□□□□□ -0.61
NR1I3-225ENST00000508387 PRKAR1BP31321 381 aa11.23□□□□□ -0.61
NR1I3-225ENST00000508387 ATP4BP51164 291 aa11.23□□□□□ -0.61
NR1I3-225ENST00000508387 DMTNQ08495 405 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms