RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 QARSP47897 775 aaKnown RBP3.13□□□□□ -1.91
TRAPPC13-209ENST00000508304 RPL29P47914 159 aaKnown RBP3.13□□□□□ -1.91
TRAPPC13-209ENST00000508304 PLK1P53350 603 aa3.13□□□□□ -1.91
TRAPPC13-209ENST00000508304 ACLYP53396 1101 aa3.13□□□□□ -1.91
TRAPPC13-209ENST00000508304 PLP1P60201 277 aa3.13□□□□□ -1.91
TRAPPC13-209ENST00000508304 RPL32P62910 135 aaKnown RBP3.13□□□□□ -1.91
TRAPPC13-209ENST00000508304 DNAJC3Q13217 504 aa3.13□□□□□ -1.91
TRAPPC13-209ENST00000508304 EIF4EBP2Q13542 120 aaPredicted RBP3.13□□□□□ -1.91
TRAPPC13-209ENST00000508304 GK3PQ14409 553 aa3.13□□□□□ -1.91
TRAPPC13-209ENST00000508304 CHRNA6Q15825 494 aa3.13□□□□□ -1.91
TRAPPC13-209ENST00000508304 TIGITQ495A1 244 aa3.13□□□□□ -1.91
TRAPPC13-209ENST00000508304 CAVIN4Q5BKX8 364 aa3.13□□□□□ -1.91
TRAPPC13-209ENST00000508304 ATAD3CQ5T2N8 411 aa3.13□□□□□ -1.91
TRAPPC13-209ENST00000508304 LEMD1Q68G75 181 aa3.13□□□□□ -1.91
TRAPPC13-209ENST00000508304 SLC8B1Q6J4K2 584 aa3.13□□□□□ -1.91
TRAPPC13-209ENST00000508304 KLHL30-AS1Q8NEE0 82 aa3.13□□□□□ -1.91
TRAPPC13-209ENST00000508304 OR4C5Q8NGB2 326 aa3.13□□□□□ -1.91
TRAPPC13-209ENST00000508304 OR52H1Q8NGJ2 320 aa3.13□□□□□ -1.91
TRAPPC13-209ENST00000508304 ADAMTS16Q8TE57 1224 aa3.13□□□□□ -1.91
TRAPPC13-209ENST00000508304 DNAJA4Q8WW22 397 aaPredicted RBP3.13□□□□□ -1.91
TRAPPC13-209ENST00000508304 ZNF75CPQ92670 426 aaPredicted RBP3.13□□□□□ -1.91
TRAPPC13-209ENST00000508304 HAVCR1Q96D42 359 aa3.13□□□□□ -1.91
TRAPPC13-209ENST00000508304 CELF6Q96J87 481 aaKnown RBP3.13□□□□□ -1.91
TRAPPC13-209ENST00000508304 MTMR9Q96QG7 549 aa3.13□□□□□ -1.91
TRAPPC13-209ENST00000508304 MCCC1Q96RQ3 725 aaPredicted RBP3.13□□□□□ -1.91
TRAPPC13-209ENST00000508304 CNN2Q99439 309 aaKnown RBP3.13□□□□□ -1.91
TRAPPC13-209ENST00000508304 APOL2Q9BQE5 337 aa3.13□□□□□ -1.91
TRAPPC13-209ENST00000508304 CCDC28BQ9BUN5 200 aa3.13□□□□□ -1.91
TRAPPC13-209ENST00000508304 ILKAPQ9H0C8 392 aaPredicted RBP3.13□□□□□ -1.91
TRAPPC13-209ENST00000508304 ANKRD19PQ9H560 264 aa3.13□□□□□ -1.91
TRAPPC13-209ENST00000508304 NARFLQ9H6Q4 476 aa3.13□□□□□ -1.91
TRAPPC13-209ENST00000508304 ISG20L2Q9H9L3 353 aaKnown RBP3.13□□□□□ -1.91
TRAPPC13-209ENST00000508304 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.13□□□□□ -1.91
TRAPPC13-209ENST00000508304 ARMCX1Q9P291 453 aa3.13□□□□□ -1.91
TRAPPC13-209ENST00000508304 WRAP73Q9P2S5 460 aaPredicted RBP3.13□□□□□ -1.91
TRAPPC13-209ENST00000508304 STARD10Q9Y365 291 aa3.13□□□□□ -1.91
TRAPPC13-209ENST00000508304 ERICH4A6NGS2 130 aa3.12□□□□□ -1.91
TRAPPC13-209ENST00000508304 VSTM2BA6NLU5 285 aa3.12□□□□□ -1.91
TRAPPC13-209ENST00000508304 OR2AG2A6NM03 316 aa3.12□□□□□ -1.91
TRAPPC13-209ENST00000508304 DHRS7CA6NNS2 312 aa3.12□□□□□ -1.91
TRAPPC13-209ENST00000508304 PP2D1A8MPX8 630 aa3.12□□□□□ -1.91
TRAPPC13-209ENST00000508304 A8MX80 341 aa3.12□□□□□ -1.91
TRAPPC13-209ENST00000508304 AIM2O14862 343 aa3.12□□□□□ -1.91
TRAPPC13-209ENST00000508304 HAT1O14929 419 aa3.12□□□□□ -1.91
TRAPPC13-209ENST00000508304 LALBAP00709 142 aa3.12□□□□□ -1.91
TRAPPC13-209ENST00000508304 RENP00797 406 aa3.12□□□□□ -1.91
TRAPPC13-209ENST00000508304 IGHG3P01860 377 aa3.12□□□□□ -1.91
TRAPPC13-209ENST00000508304 KRT6AP02538 564 aa3.12□□□□□ -1.91
TRAPPC13-209ENST00000508304 THY1P04216 161 aa3.12□□□□□ -1.91
TRAPPC13-209ENST00000508304 CT45A10P0DMU9 189 aa3.12□□□□□ -1.91
TRAPPC13-209ENST00000508304 GTF2E2P29084 291 aaKnown RBP3.12□□□□□ -1.91
TRAPPC13-209ENST00000508304 IL12AP29459 219 aa3.12□□□□□ -1.91
TRAPPC13-209ENST00000508304 HMOX2P30519 316 aa3.12□□□□□ -1.91
TRAPPC13-209ENST00000508304 CALCRP30988 508 aa3.12□□□□□ -1.91
TRAPPC13-209ENST00000508304 CD80P33681 288 aa3.12□□□□□ -1.91
TRAPPC13-209ENST00000508304 GCKP35557 465 aa3.12□□□□□ -1.91
TRAPPC13-209ENST00000508304 HSD17B2P37059 387 aa3.12□□□□□ -1.91
TRAPPC13-209ENST00000508304 OR1D4P47884 311 aa3.12□□□□□ -1.91
TRAPPC13-209ENST00000508304 GPM6AP51674 278 aa3.12□□□□□ -1.91
TRAPPC13-209ENST00000508304 PRELPP51888 382 aa3.12□□□□□ -1.91
TRAPPC13-209ENST00000508304 LIM2P55344 173 aa3.12□□□□□ -1.91
TRAPPC13-209ENST00000508304 KCNJ2P63252 427 aa3.12□□□□□ -1.91
TRAPPC13-209ENST00000508304 CHRNB3Q05901 458 aa3.12□□□□□ -1.91
TRAPPC13-209ENST00000508304 DOC2AQ14183 400 aa3.12□□□□□ -1.91
TRAPPC13-209ENST00000508304 OXA1LQ15070 435 aa3.12□□□□□ -1.91
TRAPPC13-209ENST00000508304 CCL14Q16627 93 aa3.12□□□□□ -1.91
TRAPPC13-209ENST00000508304 DUSP7Q16829 419 aa3.12□□□□□ -1.91
TRAPPC13-209ENST00000508304 C17orf58Q2M2W7 97 aa3.12□□□□□ -1.91
TRAPPC13-209ENST00000508304 NHLRC3Q5JS37 347 aa3.12□□□□□ -1.91
TRAPPC13-209ENST00000508304 FAM120AOSQ5T036 256 aa3.12□□□□□ -1.91
TRAPPC13-209ENST00000508304 TWF2Q6IBS0 349 aaKnown RBP3.12□□□□□ -1.91
TRAPPC13-209ENST00000508304 FAM199XQ6PEV8 388 aaPredicted RBP3.12□□□□□ -1.91
TRAPPC13-209ENST00000508304 PGAP1Q75T13 922 aa3.12□□□□□ -1.91
TRAPPC13-209ENST00000508304 SSX9Q7RTT3 188 aa3.12□□□□□ -1.91
TRAPPC13-209ENST00000508304 KATNAL2Q8IYT4 538 aa3.12□□□□□ -1.91
TRAPPC13-209ENST00000508304 MICU2Q8IYU8 434 aa3.12□□□□□ -1.91
TRAPPC13-209ENST00000508304 OFCC1Q8IZS5 231 aa3.12□□□□□ -1.91
TRAPPC13-209ENST00000508304 ZNF321PQ8N8H1 164 aa3.12□□□□□ -1.91
TRAPPC13-209ENST00000508304 OR2L3Q8NG85 312 aa3.12□□□□□ -1.91
TRAPPC13-209ENST00000508304 OR52K1Q8NGK4 314 aa3.12□□□□□ -1.91
TRAPPC13-209ENST00000508304 FLVCR1-AS1Q8TAF5 88 aa3.12□□□□□ -1.91
TRAPPC13-209ENST00000508304 TSEN15Q8WW01 171 aaKnown RBP3.12□□□□□ -1.91
TRAPPC13-209ENST00000508304 UFD1Q92890 307 aa3.12□□□□□ -1.91
TRAPPC13-209ENST00000508304 ZNF578Q96N58 590 aaPredicted RBP3.12□□□□□ -1.91
TRAPPC13-209ENST00000508304 ZBP1Q9H171 429 aa3.12□□□□□ -1.91
TRAPPC13-209ENST00000508304 GEMIN7Q9H840 131 aaKnown RBP3.12□□□□□ -1.91
TRAPPC13-209ENST00000508304 NYAP2Q9P242 653 aa3.12□□□□□ -1.91
TRAPPC13-209ENST00000508304 DPM3Q9P2X0 92 aa3.12□□□□□ -1.91
TRAPPC13-209ENST00000508304 PACSIN2Q9UNF0 486 aaPredicted RBP3.12□□□□□ -1.91
TRAPPC13-209ENST00000508304 KCNIP3Q9Y2W7 256 aa3.12□□□□□ -1.91
TRAPPC13-209ENST00000508304 RPL36Q9Y3U8 105 aaKnown RBP3.12□□□□□ -1.91
TRAPPC13-209ENST00000508304 L3MBTL1Q9Y468 752 aa3.12□□□□□ -1.91
TRAPPC13-209ENST00000508304 CSDC2Q9Y534 153 aaKnown RBP3.12□□□□□ -1.91
TRAPPC13-209ENST00000508304 ANKRD30BQ9BXX2 1392 aa3.12□□□□□ -1.91
TRAPPC13-209ENST00000508304 HCFC1P51610 2035 aa3.11□□□□□ -1.91
TRAPPC13-209ENST00000508304 TRAV9-2A0A087WT02 112 aa3.11□□□□□ -1.91
TRAPPC13-209ENST00000508304 IGHV3-16A0A0C4DH30 117 aa3.11□□□□□ -1.91
TRAPPC13-209ENST00000508304 GOLGA6L7A0A1B0GV03 622 aa3.11□□□□□ -1.91
TRAPPC13-209ENST00000508304 GOLGA8TH3BQL2 631 aa3.11□□□□□ -1.91
TRAPPC13-209ENST00000508304 PPP1R2P9O14990 202 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms