RNA–Protein interactions for RNA: ENST00000508279.5

DDX41-209, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 776 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-209ENST00000508279 FOXD4Q12950 439 aaPredicted RBP8.3□□□□□ -1.08
DDX41-209ENST00000508279 P2RY6Q15077 328 aa8.3□□□□□ -1.08
DDX41-209ENST00000508279 PDK3Q15120 406 aa8.3□□□□□ -1.08
DDX41-209ENST00000508279 OR1Q1Q15612 314 aa8.3□□□□□ -1.08
DDX41-209ENST00000508279 TAB1Q15750 504 aa8.3□□□□□ -1.08
DDX41-209ENST00000508279 ALG10BQ5I7T1 473 aa8.3□□□□□ -1.08
DDX41-209ENST00000508279 FBXW9Q5XUX1 488 aa8.3□□□□□ -1.08
DDX41-209ENST00000508279 NANOGP8Q6NSW7 305 aa8.3□□□□□ -1.08
DDX41-209ENST00000508279 AAED1Q7RTV5 226 aa8.3□□□□□ -1.08
DDX41-209ENST00000508279 RANBP3LQ86VV4 465 aaPredicted RBP8.3□□□□□ -1.08
DDX41-209ENST00000508279 KDM8Q8N371 416 aa8.3□□□□□ -1.08
DDX41-209ENST00000508279 C10orf53Q8N6V4 93 aa8.3□□□□□ -1.08
DDX41-209ENST00000508279 PCYOX1LQ8NBM8 494 aa8.3□□□□□ -1.08
DDX41-209ENST00000508279 BHLHE22Q8NFJ8 381 aaPredicted RBP8.3□□□□□ -1.08
DDX41-209ENST00000508279 OR9K2Q8NGE7 335 aa8.3□□□□□ -1.08
DDX41-209ENST00000508279 C10orf82Q8WW14 230 aa8.3□□□□□ -1.08
DDX41-209ENST00000508279 NINJ1Q92982 152 aa8.3□□□□□ -1.08
DDX41-209ENST00000508279 LRRC58Q96CX6 371 aa8.3□□□□□ -1.08
DDX41-209ENST00000508279 KTI12Q96EK9 354 aaPredicted RBP8.3□□□□□ -1.08
DDX41-209ENST00000508279 MCHR1Q99705 422 aa8.3□□□□□ -1.08
DDX41-209ENST00000508279 WFDC6Q9BQY6 131 aa8.3□□□□□ -1.08
DDX41-209ENST00000508279 TRIM2Q9C040 744 aa8.3□□□□□ -1.08
DDX41-209ENST00000508279 CCDC134Q9H6E4 229 aa8.3□□□□□ -1.08
DDX41-209ENST00000508279 KAT8Q9H7Z6 458 aaKnown RBP8.3□□□□□ -1.08
DDX41-209ENST00000508279 NANOGQ9H9S0 305 aa8.3□□□□□ -1.08
DDX41-209ENST00000508279 MRGBPQ9NV56 204 aa8.3□□□□□ -1.08
DDX41-209ENST00000508279 SLC9A8Q9Y2E8 581 aa8.3□□□□□ -1.08
DDX41-209ENST00000508279 FLVCR1Q9Y5Y0 555 aa8.3□□□□□ -1.08
DDX41-209ENST00000508279 CELSR1Q9NYQ6 3014 aa8.29□□□□□ -1.08
DDX41-209ENST00000508279 AQP7P3A6NL99 342 aa8.29□□□□□ -1.08
DDX41-209ENST00000508279 CPSF4LA6NMK7 179 aaKnown RBP8.29□□□□□ -1.08
DDX41-209ENST00000508279 BBIP1A8MTZ0 92 aa8.29□□□□□ -1.08
DDX41-209ENST00000508279 TMEM229AB2RXF0 380 aa8.29□□□□□ -1.08
DDX41-209ENST00000508279 ATP8B1O43520 1251 aa8.29□□□□□ -1.08
DDX41-209ENST00000508279 GGT1P19440 569 aa8.29□□□□□ -1.08
DDX41-209ENST00000508279 PCGF2P35227 344 aa8.29□□□□□ -1.08
DDX41-209ENST00000508279 SLC16A1P53985 500 aa8.29□□□□□ -1.08
DDX41-209ENST00000508279 FOXG1P55316 489 aaPredicted RBP8.29□□□□□ -1.08
DDX41-209ENST00000508279 H3F3AP84243 136 aa8.29□□□□□ -1.08
DDX41-209ENST00000508279 SLC17A1Q14916 467 aa8.29□□□□□ -1.08
DDX41-209ENST00000508279 PPA1Q15181 289 aa8.29□□□□□ -1.08
DDX41-209ENST00000508279 DUSP7Q16829 419 aa8.29□□□□□ -1.08
DDX41-209ENST00000508279 VMACQ2NL98 169 aa8.29□□□□□ -1.08
DDX41-209ENST00000508279 INTS11Q5TA45 600 aaKnown RBP8.29□□□□□ -1.08
DDX41-209ENST00000508279 ULK3Q6PHR2 472 aa8.29□□□□□ -1.08
DDX41-209ENST00000508279 OR52N5Q8NH56 324 aa8.29□□□□□ -1.08
DDX41-209ENST00000508279 STK35Q8TDR2 534 aa8.29□□□□□ -1.08
DDX41-209ENST00000508279 DNAJA4Q8WW22 397 aaPredicted RBP8.29□□□□□ -1.08
DDX41-209ENST00000508279 HSD17B8Q92506 261 aa8.29□□□□□ -1.08
DDX41-209ENST00000508279 SLC35B4Q969S0 331 aa8.29□□□□□ -1.08
DDX41-209ENST00000508279 RCN3Q96D15 328 aa8.29□□□□□ -1.08
DDX41-209ENST00000508279 MUCL1Q96DR8 90 aa8.29□□□□□ -1.08
DDX41-209ENST00000508279 SLC47A1Q96FL8 570 aa8.29□□□□□ -1.08
DDX41-209ENST00000508279 ZNF385AQ96PM9 386 aaKnown RBP8.29□□□□□ -1.08
DDX41-209ENST00000508279 ZNF317Q96PQ6 595 aaPredicted RBP8.29□□□□□ -1.08
DDX41-209ENST00000508279 CCL19Q99731 98 aa8.29□□□□□ -1.08
DDX41-209ENST00000508279 SH3GL1Q99961 368 aa8.29□□□□□ -1.08
DDX41-209ENST00000508279 ELAC2Q9BQ52 826 aaKnown RBP8.29□□□□□ -1.08
DDX41-209ENST00000508279 OR10A4Q9H209 315 aa8.29□□□□□ -1.08
DDX41-209ENST00000508279 PARPBPQ9NWS1 579 aa8.29□□□□□ -1.08
DDX41-209ENST00000508279 GID8Q9NWU2 228 aa8.29□□□□□ -1.08
DDX41-209ENST00000508279 ASB6Q9NWX5 421 aa8.29□□□□□ -1.08
DDX41-209ENST00000508279 SEC14L4Q9UDX3 406 aa8.29□□□□□ -1.08
DDX41-209ENST00000508279 TESQ9UGI8 421 aaKnown RBP8.29□□□□□ -1.08
DDX41-209ENST00000508279 USP22Q9UPT9 525 aa8.29□□□□□ -1.08
DDX41-209ENST00000508279 GMEB1Q9Y692 573 aa8.29□□□□□ -1.08
DDX41-209ENST00000508279 F8P00451 2351 aa8.28□□□□□ -1.08
DDX41-209ENST00000508279 ARID1AO14497 2285 aa8.28□□□□□ -1.08
DDX41-209ENST00000508279 CADP27708 2225 aa8.28□□□□□ -1.08
DDX41-209ENST00000508279 AKAP9Q99996 3911 aa8.28□□□□□ -1.08
DDX41-209ENST00000508279 AIM2O14862 343 aa8.28□□□□□ -1.08
DDX41-209ENST00000508279 LGI1O95970 557 aa8.28□□□□□ -1.08
DDX41-209ENST00000508279 CD3EP07766 207 aa8.28□□□□□ -1.08
DDX41-209ENST00000508279 PNMTP11086 282 aa8.28□□□□□ -1.08
DDX41-209ENST00000508279 NQO1P15559 274 aaKnown RBP8.28□□□□□ -1.08
DDX41-209ENST00000508279 CD53P19397 219 aa8.28□□□□□ -1.08
DDX41-209ENST00000508279 SEC24CP53992 1094 aa8.28□□□□□ -1.08
DDX41-209ENST00000508279 GYS2P54840 703 aa8.28□□□□□ -1.08
DDX41-209ENST00000508279 NR1H2P55055 460 aa8.28□□□□□ -1.08
DDX41-209ENST00000508279 PCBP3P57721 371 aaKnown RBP8.28□□□□□ -1.08
DDX41-209ENST00000508279 EGR4Q05215 589 aa8.28□□□□□ -1.08
DDX41-209ENST00000508279 TESK1Q15569 626 aa8.28□□□□□ -1.08
DDX41-209ENST00000508279 ACKR1Q16570 336 aa8.28□□□□□ -1.08
DDX41-209ENST00000508279 DEFB113Q30KQ7 82 aa8.28□□□□□ -1.08
DDX41-209ENST00000508279 LRRC23Q53EV4 343 aaPredicted RBP8.28□□□□□ -1.08
DDX41-209ENST00000508279 TSPO2Q5TGU0 170 aa8.28□□□□□ -1.08
DDX41-209ENST00000508279 NIPAL3Q6P499 406 aa8.28□□□□□ -1.08
DDX41-209ENST00000508279 ZNF704Q6ZNC4 412 aaPredicted RBP8.28□□□□□ -1.08
DDX41-209ENST00000508279 NET1Q7Z628 596 aaPredicted RBP8.28□□□□□ -1.08
DDX41-209ENST00000508279 PATL1Q86TB9 770 aaKnown RBP8.28□□□□□ -1.08
DDX41-209ENST00000508279 RBM45Q8IUH3 476 aaKnown RBP8.28□□□□□ -1.08
DDX41-209ENST00000508279 SLC30A8Q8IWU4 369 aa8.28□□□□□ -1.08
DDX41-209ENST00000508279 ZNF433Q8N7K0 673 aaPredicted RBP8.28□□□□□ -1.08
DDX41-209ENST00000508279 LSMEM1Q8N8F7 131 aa8.28□□□□□ -1.08
DDX41-209ENST00000508279 GPR32P1Q8NGA4 272 aa8.28□□□□□ -1.08
DDX41-209ENST00000508279 OR8J3Q8NGG0 315 aa8.28□□□□□ -1.08
DDX41-209ENST00000508279 MFSD8Q8NHS3 518 aa8.28□□□□□ -1.08
DDX41-209ENST00000508279 AKAP1Q92667 903 aaKnown RBP eCLIP8.28□□□□□ -1.08
DDX41-209ENST00000508279 SLC38A4Q969I6 547 aa8.28□□□□□ -1.08
DDX41-209ENST00000508279 TAAR8Q969N4 342 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms