RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 NCF2P19878 526 aaPredicted RBP12.56□□□□□ -0.4
RAB28-205ENST00000508274 MAP2K6P52564 334 aa12.56□□□□□ -0.4
RAB28-205ENST00000508274 FADDQ13158 208 aa12.56□□□□□ -0.4
RAB28-205ENST00000508274 TSPO2Q5TGU0 170 aa12.56□□□□□ -0.4
RAB28-205ENST00000508274 ZIC4Q8N9L1 334 aa12.56□□□□□ -0.4
RAB28-205ENST00000508274 OR9K2Q8NGE7 335 aa12.56□□□□□ -0.4
RAB28-205ENST00000508274 NFKBIDQ8NI38 313 aa12.56□□□□□ -0.4
RAB28-205ENST00000508274 BDH2Q9BUT1 245 aa12.56□□□□□ -0.4
RAB28-205ENST00000508274 CACYBPQ9HB71 228 aaKnown RBP12.56□□□□□ -0.4
RAB28-205ENST00000508274 BCL2L10Q9HD36 194 aa12.56□□□□□ -0.4
RAB28-205ENST00000508274 ZNF232Q9UNY5 417 aa12.56□□□□□ -0.4
RAB28-205ENST00000508274 SLC25A15Q9Y619 301 aa12.56□□□□□ -0.4
RAB28-205ENST00000508274 TRBV5-3A0A0A0MS03 114 aa12.55□□□□□ -0.4
RAB28-205ENST00000508274 A0A1W2PP18 115 aa12.55□□□□□ -0.4
RAB28-205ENST00000508274 A8MVM7 634 aa12.55□□□□□ -0.4
RAB28-205ENST00000508274 TMEM229AB2RXF0 380 aa12.55□□□□□ -0.4
RAB28-205ENST00000508274 HEXAP06865 529 aa12.55□□□□□ -0.4
RAB28-205ENST00000508274 PTNP21246 168 aa12.55□□□□□ -0.4
RAB28-205ENST00000508274 ZNF83P51522 516 aa12.55□□□□□ -0.4
RAB28-205ENST00000508274 P2RY4P51582 365 aa12.55□□□□□ -0.4
RAB28-205ENST00000508274 CDH11P55287 796 aa12.55□□□□□ -0.4
RAB28-205ENST00000508274 SLC25A3Q00325 362 aa12.55□□□□□ -0.4
RAB28-205ENST00000508274 GABRA6Q16445 453 aa12.55□□□□□ -0.4
RAB28-205ENST00000508274 AGKQ53H12 422 aa12.55□□□□□ -0.4
RAB28-205ENST00000508274 GPAT4Q86UL3 456 aa12.55□□□□□ -0.4
RAB28-205ENST00000508274 P2RY8Q86VZ1 359 aa12.55□□□□□ -0.4
RAB28-205ENST00000508274 BBS10Q8TAM1 723 aa12.55□□□□□ -0.4
RAB28-205ENST00000508274 C1QTNF6Q9BXI9 259 aa12.55□□□□□ -0.4
RAB28-205ENST00000508274 RAD21L1Q9H4I0 556 aa12.55□□□□□ -0.4
RAB28-205ENST00000508274 CISD1Q9NZ45 108 aaKnown RBP12.55□□□□□ -0.4
RAB28-205ENST00000508274 UPB1Q9UBR1 384 aa12.55□□□□□ -0.4
RAB28-205ENST00000508274 IFT52Q9Y366 437 aa12.55□□□□□ -0.4
RAB28-205ENST00000508274 TMCC2O75069 709 aa12.54□□□□□ -0.4
RAB28-205ENST00000508274 NPIPB7O75200 414 aa12.54□□□□□ -0.4
RAB28-205ENST00000508274 NDUFS7O75251 213 aa12.54□□□□□ -0.4
RAB28-205ENST00000508274 CD8AP01732 235 aa12.54□□□□□ -0.4
RAB28-205ENST00000508274 ARAFP10398 606 aa12.54□□□□□ -0.4
RAB28-205ENST00000508274 EGR4Q05215 589 aa12.54□□□□□ -0.4
RAB28-205ENST00000508274 LGALS3BPQ08380 585 aa12.54□□□□□ -0.4
RAB28-205ENST00000508274 KRTAP21-3Q3LHN1 58 aa12.54□□□□□ -0.4
RAB28-205ENST00000508274 GLIPR1L2Q4G1C9 344 aa12.54□□□□□ -0.4
RAB28-205ENST00000508274 GCNT6Q5T4J0 391 aa12.54□□□□□ -0.4
RAB28-205ENST00000508274 C1orf140Q5VVS0 124 aa12.54□□□□□ -0.4
RAB28-205ENST00000508274 PRAMEF8Q5VWM4 474 aa12.54□□□□□ -0.4
RAB28-205ENST00000508274 PRAMEF7Q5VXH5 474 aa12.54□□□□□ -0.4
RAB28-205ENST00000508274 WDR31Q8NA23 367 aa12.54□□□□□ -0.4
RAB28-205ENST00000508274 TMEM45BQ96B21 275 aa12.54□□□□□ -0.4
RAB28-205ENST00000508274 MUS81Q96NY9 551 aa12.54□□□□□ -0.4
RAB28-205ENST00000508274 TAPBPLQ9BX59 468 aa12.54□□□□□ -0.4
RAB28-205ENST00000508274 AMBRA1Q9C0C7 1298 aa12.54□□□□□ -0.4
RAB28-205ENST00000508274 ARMC7Q9H6L4 198 aa12.54□□□□□ -0.4
RAB28-205ENST00000508274 INTS9Q9NV88 658 aaKnown RBP12.54□□□□□ -0.4
RAB28-205ENST00000508274 CR1P17927 2039 aa12.53□□□□□ -0.4
RAB28-205ENST00000508274 ALPK2Q86TB3 2170 aa12.53□□□□□ -0.4
RAB28-205ENST00000508274 C5orf58C9J3I9 102 aa12.53□□□□□ -0.4
RAB28-205ENST00000508274 TPST1O60507 370 aa12.53□□□□□ -0.4
RAB28-205ENST00000508274 HTR2AP28223 471 aa12.53□□□□□ -0.4
RAB28-205ENST00000508274 RPS5P46782 204 aaKnown RBP12.53□□□□□ -0.4
RAB28-205ENST00000508274 ATP4BP51164 291 aa12.53□□□□□ -0.4
RAB28-205ENST00000508274 TNK1Q13470 666 aa12.53□□□□□ -0.4
RAB28-205ENST00000508274 SQLEQ14534 574 aa12.53□□□□□ -0.4
RAB28-205ENST00000508274 ZSWIM7Q19AV6 140 aa12.53□□□□□ -0.4
RAB28-205ENST00000508274 AAED1Q7RTV5 226 aa12.53□□□□□ -0.4
RAB28-205ENST00000508274 GTPBP3Q969Y2 492 aaKnown RBP12.53□□□□□ -0.4
RAB28-205ENST00000508274 TRAF4Q9BUZ4 470 aaPredicted RBP12.53□□□□□ -0.4
RAB28-205ENST00000508274 PTDSS2Q9BVG9 487 aa12.53□□□□□ -0.4
RAB28-205ENST00000508274 SF3B5Q9BWJ5 86 aaKnown RBP12.53□□□□□ -0.4
RAB28-205ENST00000508274 PRR14Q9BWN1 585 aa12.53□□□□□ -0.4
RAB28-205ENST00000508274 SLCO5A1Q9H2Y9 848 aa12.53□□□□□ -0.4
RAB28-205ENST00000508274 PARPBPQ9NWS1 579 aa12.53□□□□□ -0.4
RAB28-205ENST00000508274 SEC14L4Q9UDX3 406 aa12.53□□□□□ -0.4
RAB28-205ENST00000508274 DCTN4Q9UJW0 460 aa12.53□□□□□ -0.4
RAB28-205ENST00000508274 HMGB1P1B2RPK0 211 aaPredicted RBP12.52□□□□□ -0.4
RAB28-205ENST00000508274 FTCDNL1E5RQL4 147 aa12.52□□□□□ -0.4
RAB28-205ENST00000508274 M0R1B8 84 aa12.52□□□□□ -0.4
RAB28-205ENST00000508274 AHSA1O95433 338 aa12.52□□□□□ -0.4
RAB28-205ENST00000508274 ETS2P15036 469 aa12.52□□□□□ -0.4
RAB28-205ENST00000508274 CDH2P19022 906 aaPredicted RBP12.52□□□□□ -0.4
RAB28-205ENST00000508274 CD40P25942 277 aa12.52□□□□□ -0.4
RAB28-205ENST00000508274 CDK6Q00534 326 aa12.52□□□□□ -0.4
RAB28-205ENST00000508274 TMEM225Q6GV28 225 aa12.52□□□□□ -0.4
RAB28-205ENST00000508274 OR7E24Q6IFN5 339 aa12.52□□□□□ -0.4
RAB28-205ENST00000508274 TMEM108Q6UXF1 575 aa12.52□□□□□ -0.4
RAB28-205ENST00000508274 B3GLCTQ6Y288 498 aa12.52□□□□□ -0.4
RAB28-205ENST00000508274 KDM8Q8N371 416 aa12.52□□□□□ -0.4
RAB28-205ENST00000508274 CKAP2Q8WWK9 683 aa12.52□□□□□ -0.4
RAB28-205ENST00000508274 SLC25A36Q96CQ1 311 aa12.52□□□□□ -0.4
RAB28-205ENST00000508274 KTI12Q96EK9 354 aaPredicted RBP12.52□□□□□ -0.4
RAB28-205ENST00000508274 CPPED1Q9BRF8 314 aaPredicted RBP12.52□□□□□ -0.4
RAB28-205ENST00000508274 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.52□□□□□ -0.4
RAB28-205ENST00000508274 GDF2Q9UK05 429 aaPredicted RBP12.52□□□□□ -0.4
RAB28-205ENST00000508274 E7EQL1 145 aa12.52□□□□□ -0.41
RAB28-205ENST00000508274 IGHV4-39P01824 125 aa12.52□□□□□ -0.41
RAB28-205ENST00000508274 PNMTP11086 282 aa12.52□□□□□ -0.41
RAB28-205ENST00000508274 PTAFRP25105 342 aa12.52□□□□□ -0.41
RAB28-205ENST00000508274 AQP1P29972 269 aa12.52□□□□□ -0.41
RAB28-205ENST00000508274 PRKAR1BP31321 381 aa12.52□□□□□ -0.41
RAB28-205ENST00000508274 SELENOPP49908 381 aa12.52□□□□□ -0.41
RAB28-205ENST00000508274 SCARB2Q14108 478 aa12.52□□□□□ -0.41
RAB28-205ENST00000508274 VEZF1Q14119 521 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms