RNA–Protein interactions for RNA: ENST00000506960.5

SSBP2-206, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2

Gene SSBP2, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-206ENST00000506960 COQ10BQ9H8M1 238 aa2.45□□□□□ -2.02
SSBP2-206ENST00000506960 CD274Q9NZQ7 290 aa2.45□□□□□ -2.02
SSBP2-206ENST00000506960 RIMS3Q9UJD0 308 aa2.45□□□□□ -2.02
SSBP2-206ENST00000506960 UBQLN1Q9UMX0 589 aaKnown RBP2.45□□□□□ -2.02
SSBP2-206ENST00000506960 WDR45Q9Y484 360 aa2.45□□□□□ -2.02
SSBP2-206ENST00000506960 PKD1L2Q7Z442 2459 aa2.45□□□□□ -2.02
SSBP2-206ENST00000506960 EPG5Q9HCE0 2579 aa2.45□□□□□ -2.02
SSBP2-206ENST00000506960 SF3B1O75533 1304 aaKnown RBP eCLIP2.44□□□□□ -2.023e-6■■■■■ 100.5
SSBP2-206ENST00000506960 CDHR2Q9BYE9 1310 aa2.44□□□□□ -2.02
SSBP2-206ENST00000506960 WDR87Q6ZQQ6 2873 aa2.44□□□□□ -2.02
SSBP2-206ENST00000506960 MYO15AQ9UKN7 3530 aa2.44□□□□□ -2.02
SSBP2-206ENST00000506960 NLRC5Q86WI3 1866 aa2.44□□□□□ -2.02
SSBP2-206ENST00000506960 PRRC2BQ5JSZ5 2229 aaKnown RBP2.44□□□□□ -2.02
SSBP2-206ENST00000506960 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.44□□□□□ -2.02
SSBP2-206ENST00000506960 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.44□□□□□ -2.02
SSBP2-206ENST00000506960 FAM231BA6NCW3 169 aa2.44□□□□□ -2.02
SSBP2-206ENST00000506960 EMC8O43402 210 aa2.44□□□□□ -2.02
SSBP2-206ENST00000506960 MMP23AO75900 390 aa2.44□□□□□ -2.02
SSBP2-206ENST00000506960 TM7SF2O76062 418 aa2.44□□□□□ -2.02
SSBP2-206ENST00000506960 LRATO95237 230 aa2.44□□□□□ -2.02
SSBP2-206ENST00000506960 KRT6BP04259 564 aa2.44□□□□□ -2.02
SSBP2-206ENST00000506960 SEMG1P04279 462 aa2.44□□□□□ -2.02
SSBP2-206ENST00000506960 IGF1P05019 195 aa2.44□□□□□ -2.02
SSBP2-206ENST00000506960 ASNSP08243 561 aa2.44□□□□□ -2.02
SSBP2-206ENST00000506960 IGLL1P15814 213 aa2.44□□□□□ -2.02
SSBP2-206ENST00000506960 MDH1P40925 334 aaKnown RBP2.44□□□□□ -2.02
SSBP2-206ENST00000506960 KRT6CP48668 564 aa2.44□□□□□ -2.02
SSBP2-206ENST00000506960 CAV2P51636 162 aa2.44□□□□□ -2.02
SSBP2-206ENST00000506960 TIMM10P62072 90 aa2.44□□□□□ -2.02
SSBP2-206ENST00000506960 EWSR1Q01844 656 aaKnown RBP eCLIP2.44□□□□□ -2.022e-8■■■■■ 39.4
SSBP2-206ENST00000506960 PJVKQ0ZLH3 352 aa2.44□□□□□ -2.02
SSBP2-206ENST00000506960 CAPRIN1Q14444 709 aaKnown RBP2.44□□□□□ -2.02
SSBP2-206ENST00000506960 LRRC36Q1X8D7 754 aa2.44□□□□□ -2.02
SSBP2-206ENST00000506960 C2orf83Q53S99 150 aa2.44□□□□□ -2.02
SSBP2-206ENST00000506960 SPATA46Q5T0L3 261 aa2.44□□□□□ -2.02
SSBP2-206ENST00000506960 RIPPLY2Q5TAB7 128 aa2.44□□□□□ -2.02
SSBP2-206ENST00000506960 ATF7IP2Q5U623 682 aa2.44□□□□□ -2.02
SSBP2-206ENST00000506960 KRTAP5-7Q6L8G8 165 aa2.44□□□□□ -2.02
SSBP2-206ENST00000506960 C16orf62Q7Z3J2 963 aa2.44□□□□□ -2.02
SSBP2-206ENST00000506960 ACOT1Q86TX2 421 aa2.44□□□□□ -2.02
SSBP2-206ENST00000506960 PPP1R27Q86WC6 154 aa2.44□□□□□ -2.02
SSBP2-206ENST00000506960 ERI1Q8IV48 349 aaKnown RBP2.44□□□□□ -2.02
SSBP2-206ENST00000506960 FADS6Q8N9I5 356 aa2.44□□□□□ -2.02
SSBP2-206ENST00000506960 STXBP6Q8NFX7 210 aa2.44□□□□□ -2.02
SSBP2-206ENST00000506960 AENQ8WTP8 325 aaKnown RBP2.44□□□□□ -2.02
SSBP2-206ENST00000506960 C4orf36Q96KX1 117 aa2.44□□□□□ -2.02
SSBP2-206ENST00000506960 MCHR1Q99705 422 aa2.44□□□□□ -2.02
SSBP2-206ENST00000506960 CHIAQ9BZP6 476 aa2.44□□□□□ -2.02
SSBP2-206ENST00000506960 CALHM2Q9HA72 323 aa2.44□□□□□ -2.02
SSBP2-206ENST00000506960 MARCH5Q9NX47 278 aa2.44□□□□□ -2.02
SSBP2-206ENST00000506960 AIPL1Q9NZN9 384 aa2.44□□□□□ -2.02
SSBP2-206ENST00000506960 ONECUT1Q9UBC0 465 aa2.44□□□□□ -2.02
SSBP2-206ENST00000506960 ZNF221Q9UK13 617 aa2.44□□□□□ -2.02
SSBP2-206ENST00000506960 IFT52Q9Y366 437 aa2.44□□□□□ -2.02
SSBP2-206ENST00000506960 AP1M2Q9Y6Q5 423 aa2.44□□□□□ -2.02
SSBP2-206ENST00000506960 CEMIPQ8WUJ3 1361 aa2.44□□□□□ -2.02
SSBP2-206ENST00000506960 USP24Q9UPU5 2620 aa2.44□□□□□ -2.02
SSBP2-206ENST00000506960 COL11A1P12107 1806 aaPredicted RBP2.44□□□□□ -2.02
SSBP2-206ENST00000506960 CHD6Q8TD26 2715 aa2.43□□□□□ -2.02
SSBP2-206ENST00000506960 ESYT2A0FGR8 921 aa2.43□□□□□ -2.02
SSBP2-206ENST00000506960 KIF2AO00139 706 aaPredicted RBP2.43□□□□□ -2.02
SSBP2-206ENST00000506960 CTAGE5O15320 804 aa2.43□□□□□ -2.02
SSBP2-206ENST00000506960 ZNF264O43296 627 aa2.43□□□□□ -2.02
SSBP2-206ENST00000506960 UFL1O94874 794 aa2.43□□□□□ -2.02
SSBP2-206ENST00000506960 KRT6AP02538 564 aa2.43□□□□□ -2.02
SSBP2-206ENST00000506960 OPN1LWP04000 364 aa2.43□□□□□ -2.02
SSBP2-206ENST00000506960 PCCBP05166 539 aa2.43□□□□□ -2.02
SSBP2-206ENST00000506960 GCFC2P16383 781 aaKnown RBP2.43□□□□□ -2.02
SSBP2-206ENST00000506960 ELK1P19419 428 aa2.43□□□□□ -2.02
SSBP2-206ENST00000506960 TBXA2RP21731 343 aa2.43□□□□□ -2.02
SSBP2-206ENST00000506960 GABRR1P24046 479 aa2.43□□□□□ -2.02
SSBP2-206ENST00000506960 HMGB2P26583 209 aaKnown RBP2.43□□□□□ -2.02
SSBP2-206ENST00000506960 HTR2AP28223 471 aa2.43□□□□□ -2.02
SSBP2-206ENST00000506960 KIR2DS2P43631 304 aa2.43□□□□□ -2.02
SSBP2-206ENST00000506960 PLA2G16P53816 162 aa2.43□□□□□ -2.02
SSBP2-206ENST00000506960 WNT4P56705 351 aa2.43□□□□□ -2.02
SSBP2-206ENST00000506960 RIPPLY3P57055 190 aa2.43□□□□□ -2.02
SSBP2-206ENST00000506960 RIPPLY1Q0D2K3 151 aa2.43□□□□□ -2.02
SSBP2-206ENST00000506960 RAB40BQ12829 278 aa2.43□□□□□ -2.02
SSBP2-206ENST00000506960 ORC2Q13416 577 aaPredicted RBP2.43□□□□□ -2.02
SSBP2-206ENST00000506960 CFAP221Q4G0U5 840 aa2.43□□□□□ -2.02
SSBP2-206ENST00000506960 EOGTQ5NDL2 527 aa2.43□□□□□ -2.02
SSBP2-206ENST00000506960 FAM199XQ6PEV8 388 aaPredicted RBP2.43□□□□□ -2.02
SSBP2-206ENST00000506960 KCNIP4Q6PIL6 250 aa2.43□□□□□ -2.02
SSBP2-206ENST00000506960 LCA5Q86VQ0 697 aa2.43□□□□□ -2.02
SSBP2-206ENST00000506960 OR5L2Q8NGL0 311 aa2.43□□□□□ -2.02
SSBP2-206ENST00000506960 SLC5A11Q8WWX8 675 aa2.43□□□□□ -2.02
SSBP2-206ENST00000506960 DCUN1D4Q92564 292 aa2.43□□□□□ -2.02
SSBP2-206ENST00000506960 FRAT1Q92837 279 aaPredicted RBP2.43□□□□□ -2.02
SSBP2-206ENST00000506960 TBC1D31Q96DN5 1066 aa2.43□□□□□ -2.02
SSBP2-206ENST00000506960 CELF6Q96J87 481 aaKnown RBP2.43□□□□□ -2.02
SSBP2-206ENST00000506960 RIT2Q99578 217 aa2.43□□□□□ -2.02
SSBP2-206ENST00000506960 TXN2Q99757 166 aa2.43□□□□□ -2.02
SSBP2-206ENST00000506960 TPPP3Q9BW30 176 aa2.43□□□□□ -2.02
SSBP2-206ENST00000506960 NARFLQ9H6Q4 476 aa2.43□□□□□ -2.02
SSBP2-206ENST00000506960 GNG12Q9UBI6 72 aa2.43□□□□□ -2.02
SSBP2-206ENST00000506960 ISY1Q9ULR0 285 aaKnown RBP2.43□□□□□ -2.02
SSBP2-206ENST00000506960 MCM3APO60318 1980 aa2.43□□□□□ -2.02
SSBP2-206ENST00000506960 SIPA1L1O43166 1804 aa2.42□□□□□ -2.02
SSBP2-206ENST00000506960 SIP14410 1827 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms