RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 RTL6Q6ICC9 239 aa7.58□□□□□ -1.2
PDGFC-205ENST00000506880 FCRLAQ7L513 359 aa7.58□□□□□ -1.2
PDGFC-205ENST00000506880 FAM214BQ7L5A3 538 aa7.58□□□□□ -1.2
PDGFC-205ENST00000506880 KIF18BQ86Y91 864 aa7.58□□□□□ -1.2
PDGFC-205ENST00000506880 BOD1Q96IK1 185 aa7.58□□□□□ -1.2
PDGFC-205ENST00000506880 TPD52L3Q96J77 140 aa7.58□□□□□ -1.2
PDGFC-205ENST00000506880 ADAD1Q96M93 576 aaKnown RBP7.58□□□□□ -1.2
PDGFC-205ENST00000506880 OR5B2Q96R09 309 aa7.58□□□□□ -1.2
PDGFC-205ENST00000506880 PIP5K1AQ99755 562 aa7.58□□□□□ -1.2
PDGFC-205ENST00000506880 ASPNQ9BXN1 380 aa7.58□□□□□ -1.2
PDGFC-205ENST00000506880 HDHD5Q9BXW7 423 aa7.58□□□□□ -1.2
PDGFC-205ENST00000506880 PRRG4Q9BZD6 226 aa7.58□□□□□ -1.2
PDGFC-205ENST00000506880 PLSCR4Q9NRQ2 329 aa7.58□□□□□ -1.2
PDGFC-205ENST00000506880 NDUFAF4Q9P032 175 aa7.58□□□□□ -1.2
PDGFC-205ENST00000506880 KLHL13Q9P2N7 655 aa7.58□□□□□ -1.2
PDGFC-205ENST00000506880 EGFL7Q9UHF1 273 aa7.58□□□□□ -1.2
PDGFC-205ENST00000506880 TINAGQ9UJW2 476 aa7.58□□□□□ -1.2
PDGFC-205ENST00000506880 A4GNTQ9UNA3 340 aa7.58□□□□□ -1.2
PDGFC-205ENST00000506880 POMPQ9Y244 141 aa7.58□□□□□ -1.2
PDGFC-205ENST00000506880 MED31Q9Y3C7 131 aa7.58□□□□□ -1.2
PDGFC-205ENST00000506880 HRH3Q9Y5N1 445 aa7.58□□□□□ -1.2
PDGFC-205ENST00000506880 NOX1Q9Y5S8 564 aa7.58□□□□□ -1.2
PDGFC-205ENST00000506880 ICE1Q9Y2F5 2266 aa7.58□□□□□ -1.2
PDGFC-205ENST00000506880 TCRBV5S2A0A599 114 aa7.57□□□□□ -1.2
PDGFC-205ENST00000506880 DHRS12A0PJE2 317 aa7.57□□□□□ -1.2
PDGFC-205ENST00000506880 TMEM72A0PK05 275 aa7.57□□□□□ -1.2
PDGFC-205ENST00000506880 FTCDNL1E5RQL4 147 aa7.57□□□□□ -1.2
PDGFC-205ENST00000506880 M0R3H8 397 aa7.57□□□□□ -1.2
PDGFC-205ENST00000506880 TNFSF11O14788 317 aa7.57□□□□□ -1.2
PDGFC-205ENST00000506880 EFNA2O43921 213 aa7.57□□□□□ -1.2
PDGFC-205ENST00000506880 TPST2O60704 377 aa7.57□□□□□ -1.2
PDGFC-205ENST00000506880 AGFG2O95081 481 aa7.57□□□□□ -1.2
PDGFC-205ENST00000506880 PRSS23O95084 383 aa7.57□□□□□ -1.2
PDGFC-205ENST00000506880 CLDN14O95500 239 aa7.57□□□□□ -1.2
PDGFC-205ENST00000506880 OPN1SWP03999 348 aa7.57□□□□□ -1.2
PDGFC-205ENST00000506880 HIST1H2ABP04908 130 aa7.57□□□□□ -1.2
PDGFC-205ENST00000506880 YES1P07947 543 aa7.57□□□□□ -1.2
PDGFC-205ENST00000506880 TSPAN19P0C672 248 aa7.57□□□□□ -1.2
PDGFC-205ENST00000506880 TMIGD3P0DMS9 266 aaPredicted RBP7.57□□□□□ -1.2
PDGFC-205ENST00000506880 TFPIP10646 304 aa7.57□□□□□ -1.2
PDGFC-205ENST00000506880 PRG2P13727 222 aa7.57□□□□□ -1.2
PDGFC-205ENST00000506880 ST13P50502 369 aaKnown RBP7.57□□□□□ -1.2
PDGFC-205ENST00000506880 ASCL1P50553 236 aa7.57□□□□□ -1.2
PDGFC-205ENST00000506880 SUCLG1P53597 346 aaKnown RBP7.57□□□□□ -1.2
PDGFC-205ENST00000506880 CLDN20P56880 219 aa7.57□□□□□ -1.2
PDGFC-205ENST00000506880 EGR4Q05215 589 aa7.57□□□□□ -1.2
PDGFC-205ENST00000506880 P2RY6Q15077 328 aa7.57□□□□□ -1.2
PDGFC-205ENST00000506880 PON3Q15166 354 aa7.57□□□□□ -1.2
PDGFC-205ENST00000506880 IGFBP7Q16270 282 aa7.57□□□□□ -1.2
PDGFC-205ENST00000506880 NDUFAF6Q330K2 333 aa7.57□□□□□ -1.2
PDGFC-205ENST00000506880 GLIPR1L2Q4G1C9 344 aa7.57□□□□□ -1.2
PDGFC-205ENST00000506880 TMEM201Q5SNT2 666 aa7.57□□□□□ -1.2
PDGFC-205ENST00000506880 DCST1Q5T197 706 aa7.57□□□□□ -1.2
PDGFC-205ENST00000506880 BEND4Q6ZU67 534 aa7.57□□□□□ -1.2
PDGFC-205ENST00000506880 TMPRSS11FQ6ZWK6 438 aa7.57□□□□□ -1.2
PDGFC-205ENST00000506880 H1FNTQ75WM6 255 aaPredicted RBP7.57□□□□□ -1.2
PDGFC-205ENST00000506880 HIST3H2AQ7L7L0 130 aa7.57□□□□□ -1.2
PDGFC-205ENST00000506880 GDF7Q7Z4P5 450 aa7.57□□□□□ -1.2
PDGFC-205ENST00000506880 PXKQ7Z7A4 578 aa7.57□□□□□ -1.2
PDGFC-205ENST00000506880 ZDHHC21Q8IVQ6 265 aa7.57□□□□□ -1.2
PDGFC-205ENST00000506880 POMGNT2Q8NAT1 580 aa7.57□□□□□ -1.2
PDGFC-205ENST00000506880 CA5BP1Q8WTZ4 195 aa7.57□□□□□ -1.2
PDGFC-205ENST00000506880 TMEM239Q8WW34 195 aa7.57□□□□□ -1.2
PDGFC-205ENST00000506880 HIST1H2ACQ93077 130 aa7.57□□□□□ -1.2
PDGFC-205ENST00000506880 INTS12Q96CB8 462 aaKnown RBP7.57□□□□□ -1.2
PDGFC-205ENST00000506880 CCDC120Q96HB5 630 aa7.57□□□□□ -1.2
PDGFC-205ENST00000506880 LRR1Q96L50 414 aa7.57□□□□□ -1.2
PDGFC-205ENST00000506880 OXGR1Q96P68 337 aa7.57□□□□□ -1.2
PDGFC-205ENST00000506880 TRIB1Q96RU8 372 aa7.57□□□□□ -1.2
PDGFC-205ENST00000506880 PSD2Q9BQI7 771 aa7.57□□□□□ -1.2
PDGFC-205ENST00000506880 CADM1Q9BY67 442 aaKnown RBP7.57□□□□□ -1.2
PDGFC-205ENST00000506880 TRIM8Q9BZR9 551 aa7.57□□□□□ -1.2
PDGFC-205ENST00000506880 AMBRA1Q9C0C7 1298 aa7.57□□□□□ -1.2
PDGFC-205ENST00000506880 NMNAT1Q9HAN9 279 aaPredicted RBP7.57□□□□□ -1.2
PDGFC-205ENST00000506880 KCNJ16Q9NPI9 418 aa7.57□□□□□ -1.2
PDGFC-205ENST00000506880 NANSQ9NR45 359 aa7.57□□□□□ -1.2
PDGFC-205ENST00000506880 CCM2LQ9NUG4 571 aaPredicted RBP7.57□□□□□ -1.2
PDGFC-205ENST00000506880 ARMC1Q9NVT9 282 aa7.57□□□□□ -1.2
PDGFC-205ENST00000506880 JKAMPQ9P055 326 aa7.57□□□□□ -1.2
PDGFC-205ENST00000506880 ENOPH1Q9UHY7 261 aa7.57□□□□□ -1.2
PDGFC-205ENST00000506880 PACSIN3Q9UKS6 424 aa7.57□□□□□ -1.2
PDGFC-205ENST00000506880 SLC7A7Q9UM01 511 aa7.57□□□□□ -1.2
PDGFC-205ENST00000506880 HCFC1P51610 2035 aa7.57□□□□□ -1.2
PDGFC-205ENST00000506880 FREM1Q5H8C1 2179 aa7.56□□□□□ -1.2
PDGFC-205ENST00000506880 ALPK2Q86TB3 2170 aa7.56□□□□□ -1.2
PDGFC-205ENST00000506880 PKDREJQ9NTG1 2253 aa7.56□□□□□ -1.2
PDGFC-205ENST00000506880 HNRNPRO43390 633 aaKnown RBP7.56□□□□□ -1.2
PDGFC-205ENST00000506880 CXCL13O43927 109 aa7.56□□□□□ -1.2
PDGFC-205ENST00000506880 DEAF1O75398 565 aaPredicted RBP7.56□□□□□ -1.2
PDGFC-205ENST00000506880 LYPD3O95274 346 aa7.56□□□□□ -1.2
PDGFC-205ENST00000506880 PLGP00747 810 aaPredicted RBP7.56□□□□□ -1.2
PDGFC-205ENST00000506880 ASAH2BP0C7U1 165 aa7.56□□□□□ -1.2
PDGFC-205ENST00000506880 APEHP13798 732 aaKnown RBP7.56□□□□□ -1.2
PDGFC-205ENST00000506880 TCN1P20061 433 aaPredicted RBP7.56□□□□□ -1.2
PDGFC-205ENST00000506880 SFTPDP35247 375 aa7.56□□□□□ -1.2
PDGFC-205ENST00000506880 STARP49675 285 aa7.56□□□□□ -1.2
PDGFC-205ENST00000506880 ARHGDIAP52565 204 aa7.56□□□□□ -1.2
PDGFC-205ENST00000506880 SH3BGRP55822 239 aaPredicted RBP7.56□□□□□ -1.2
PDGFC-205ENST00000506880 CBX1P83916 185 aa7.56□□□□□ -1.2
PDGFC-205ENST00000506880 HSF1Q00613 529 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms