RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 ZBP1Q9H171 429 aa2.56□□□□□ -2
TRAPPC11-205ENST00000506426 OPN3Q9H1Y3 402 aaPredicted RBP2.56□□□□□ -2
TRAPPC11-205ENST00000506426 ADNPQ9H2P0 1102 aa2.56□□□□□ -2
TRAPPC11-205ENST00000506426 PPDPFQ9H3Y8 114 aa2.56□□□□□ -2
TRAPPC11-205ENST00000506426 VPS37BQ9H9H4 285 aa2.56□□□□□ -2
TRAPPC11-205ENST00000506426 SGK2Q9HBY8 427 aa2.56□□□□□ -2
TRAPPC11-205ENST00000506426 FANCFQ9NPI8 374 aa2.56□□□□□ -2
TRAPPC11-205ENST00000506426 SLC17A5Q9NRA2 495 aa2.56□□□□□ -2
TRAPPC11-205ENST00000506426 PRODH2Q9UF12 536 aa2.56□□□□□ -2
TRAPPC11-205ENST00000506426 SLC2A6Q9UGQ3 507 aa2.56□□□□□ -2
TRAPPC11-205ENST00000506426 PIGLQ9Y2B2 252 aa2.56□□□□□ -2
TRAPPC11-205ENST00000506426 MTCH2Q9Y6C9 303 aa2.56□□□□□ -2
TRAPPC11-205ENST00000506426 PARP14Q460N5 1801 aa2.56□□□□□ -2
TRAPPC11-205ENST00000506426 BAZ2AQ9UIF9 1905 aaKnown RBP2.56□□□□□ -2
TRAPPC11-205ENST00000506426 PIEZO1Q92508 2521 aa2.56□□□□□ -2
TRAPPC11-205ENST00000506426 IGHV2-70DA0A0C4DH43 119 aa2.55□□□□□ -2
TRAPPC11-205ENST00000506426 A0A0J9YWU9 116 aa2.55□□□□□ -2
TRAPPC11-205ENST00000506426 CTAGE15A4D2H0 777 aa2.55□□□□□ -2
TRAPPC11-205ENST00000506426 LRP5LA4QPB2 252 aa2.55□□□□□ -2
TRAPPC11-205ENST00000506426 FAM47DPA6NHR8 397 aa2.55□□□□□ -2
TRAPPC11-205ENST00000506426 SAGE2PA6NJ88 616 aa2.55□□□□□ -2
TRAPPC11-205ENST00000506426 EFCAB7A8K855 629 aa2.55□□□□□ -2
TRAPPC11-205ENST00000506426 SHISA9B4DS77 424 aa2.55□□□□□ -2
TRAPPC11-205ENST00000506426 E9PAM4 449 aa2.55□□□□□ -2
TRAPPC11-205ENST00000506426 E9PLD3 99 aa2.55□□□□□ -2
TRAPPC11-205ENST00000506426 E9PQ18 207 aa2.55□□□□□ -2
TRAPPC11-205ENST00000506426 G3V4G9 280 aa2.55□□□□□ -2
TRAPPC11-205ENST00000506426 SGK1O00141 431 aa2.55□□□□□ -2
TRAPPC11-205ENST00000506426 TAPBPO15533 448 aa2.55□□□□□ -2
TRAPPC11-205ENST00000506426 RS1O15537 224 aa2.55□□□□□ -2
TRAPPC11-205ENST00000506426 SRPX2O60687 465 aaPredicted RBP2.55□□□□□ -2
TRAPPC11-205ENST00000506426 GALR3O60755 368 aaPredicted RBP2.55□□□□□ -2
TRAPPC11-205ENST00000506426 SH3BGRLO75368 114 aa2.55□□□□□ -2
TRAPPC11-205ENST00000506426 ECI2O75521 394 aa2.55□□□□□ -2
TRAPPC11-205ENST00000506426 UGT2B17O75795 530 aa2.55□□□□□ -2
TRAPPC11-205ENST00000506426 CIB2O75838 187 aa2.55□□□□□ -2
TRAPPC11-205ENST00000506426 HPP00738 406 aa2.55□□□□□ -2
TRAPPC11-205ENST00000506426 RENP00797 406 aa2.55□□□□□ -2
TRAPPC11-205ENST00000506426 CA1P00915 261 aaPredicted RBP2.55□□□□□ -2
TRAPPC11-205ENST00000506426 SERPINA3P01011 423 aa2.55□□□□□ -2
TRAPPC11-205ENST00000506426 ALOX5P09917 674 aa2.55□□□□□ -2
TRAPPC11-205ENST00000506426 CT45A10P0DMU9 189 aa2.55□□□□□ -2
TRAPPC11-205ENST00000506426 UMPSP11172 480 aa2.55□□□□□ -2
TRAPPC11-205ENST00000506426 TOP1P11387 765 aaKnown RBP2.55□□□□□ -2
TRAPPC11-205ENST00000506426 COL11A1P12107 1806 aaPredicted RBP2.55□□□□□ -2
TRAPPC11-205ENST00000506426 CCDC130P13994 396 aa2.55□□□□□ -2
TRAPPC11-205ENST00000506426 POU2F1P14859 743 aa2.55□□□□□ -2
TRAPPC11-205ENST00000506426 IL9P15248 144 aa2.55□□□□□ -2
TRAPPC11-205ENST00000506426 IMPDH1P20839 514 aa2.55□□□□□ -2
TRAPPC11-205ENST00000506426 SERPINA2P20848 420 aa2.55□□□□□ -2
TRAPPC11-205ENST00000506426 IDSP22304 550 aa2.55□□□□□ -2
TRAPPC11-205ENST00000506426 MMP11P24347 488 aa2.55□□□□□ -2
TRAPPC11-205ENST00000506426 HMGCLP35914 325 aa2.55□□□□□ -2
TRAPPC11-205ENST00000506426 ELK3P41970 407 aa2.55□□□□□ -2
TRAPPC11-205ENST00000506426 MAGEA8P43361 318 aa2.55□□□□□ -2
TRAPPC11-205ENST00000506426 ALDH3B2P48448 385 aa2.55□□□□□ -2
TRAPPC11-205ENST00000506426 CASP4P49662 377 aa2.55□□□□□ -2
TRAPPC11-205ENST00000506426 COL4A4P53420 1690 aaPredicted RBP2.55□□□□□ -2
TRAPPC11-205ENST00000506426 SP4Q02446 784 aa2.55□□□□□ -2
TRAPPC11-205ENST00000506426 ST3GAL3Q11203 375 aa2.55□□□□□ -2
TRAPPC11-205ENST00000506426 GPNMBQ14956 572 aa2.55□□□□□ -2
TRAPPC11-205ENST00000506426 SLC10A1Q14973 349 aa2.55□□□□□ -2
TRAPPC11-205ENST00000506426 SSX2Q16385 188 aa2.55□□□□□ -2
TRAPPC11-205ENST00000506426 GLIPR1L2Q4G1C9 344 aa2.55□□□□□ -2
TRAPPC11-205ENST00000506426 TP53I3Q53FA7 332 aa2.55□□□□□ -2
TRAPPC11-205ENST00000506426 FAM120AOSQ5T036 256 aa2.55□□□□□ -2
TRAPPC11-205ENST00000506426 OTUD3Q5T2D3 398 aaPredicted RBP2.55□□□□□ -2
TRAPPC11-205ENST00000506426 PVRIGQ6DKI7 326 aa2.55□□□□□ -2
TRAPPC11-205ENST00000506426 VITQ6UXI7 678 aa2.55□□□□□ -2
TRAPPC11-205ENST00000506426 TRPM8Q7Z2W7 1104 aa2.55□□□□□ -2
TRAPPC11-205ENST00000506426 TIPARPQ7Z3E1 657 aaKnown RBP2.55□□□□□ -2
TRAPPC11-205ENST00000506426 CTAGE6Q86UF2 777 aa2.55□□□□□ -2
TRAPPC11-205ENST00000506426 MCOLN2Q8IZK6 566 aa2.55□□□□□ -2
TRAPPC11-205ENST00000506426 LINC01561Q8N1V8 128 aa2.55□□□□□ -2
TRAPPC11-205ENST00000506426 CSNK1A1LQ8N752 337 aa2.55□□□□□ -2
TRAPPC11-205ENST00000506426 NECAB1Q8N987 351 aa2.55□□□□□ -2
TRAPPC11-205ENST00000506426 OR2T33Q8NG76 320 aa2.55□□□□□ -2
TRAPPC11-205ENST00000506426 OR9A4Q8NGU2 314 aa2.55□□□□□ -2
TRAPPC11-205ENST00000506426 AKR7LQ8NHP1 331 aa2.55□□□□□ -2
TRAPPC11-205ENST00000506426 ITLN1Q8WWA0 313 aa2.55□□□□□ -2
TRAPPC11-205ENST00000506426 PIBF1Q8WXW3 757 aa2.55□□□□□ -2
TRAPPC11-205ENST00000506426 FAM122AQ96E09 287 aa2.55□□□□□ -2
TRAPPC11-205ENST00000506426 CCNL2Q96S94 520 aaPredicted RBP2.55□□□□□ -2
TRAPPC11-205ENST00000506426 NPY6RQ99463 290 aa2.55□□□□□ -2
TRAPPC11-205ENST00000506426 CCDC77Q9BR77 488 aa2.55□□□□□ -2
TRAPPC11-205ENST00000506426 MTG1Q9BT17 334 aaPredicted RBP2.55□□□□□ -2
TRAPPC11-205ENST00000506426 PARD6BQ9BYG5 372 aa2.55□□□□□ -2
TRAPPC11-205ENST00000506426 TRIM15Q9C019 465 aa2.55□□□□□ -2
TRAPPC11-205ENST00000506426 LRRN3Q9H3W5 708 aa2.55□□□□□ -2
TRAPPC11-205ENST00000506426 MCCC2Q9HCC0 563 aa2.55□□□□□ -2
TRAPPC11-205ENST00000506426 ETNK2Q9NVF9 386 aa2.55□□□□□ -2
TRAPPC11-205ENST00000506426 IL36GQ9NZH8 169 aa2.55□□□□□ -2
TRAPPC11-205ENST00000506426 WRAP73Q9P2S5 460 aaPredicted RBP2.55□□□□□ -2
TRAPPC11-205ENST00000506426 SEC14L3Q9UDX4 400 aa2.55□□□□□ -2
TRAPPC11-205ENST00000506426 ADAM28Q9UKQ2 775 aa2.55□□□□□ -2
TRAPPC11-205ENST00000506426 SAMD4AQ9UPU9 718 aaKnown RBP2.55□□□□□ -2
TRAPPC11-205ENST00000506426 RASD1Q9Y272 281 aa2.55□□□□□ -2
TRAPPC11-205ENST00000506426 TTC41PQ6P2S7 1318 aa2.54□□□□□ -2
TRAPPC11-205ENST00000506426 CCDC171Q6TFL3 1326 aa2.54□□□□□ -2
TRAPPC11-205ENST00000506426 CCT8L1PA6NM43 557 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms