RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 RRP9O43818 475 aaKnown RBP4.41□□□□□ -1.7
LMNB1-208ENST00000504788 CXCL13O43927 109 aa4.41□□□□□ -1.7
LMNB1-208ENST00000504788 WDR1O75083 606 aa4.41□□□□□ -1.7
LMNB1-208ENST00000504788 TIPRLO75663 272 aa4.41□□□□□ -1.7
LMNB1-208ENST00000504788 HPRP00739 348 aa4.41□□□□□ -1.7
LMNB1-208ENST00000504788 FPR1P21462 350 aa4.41□□□□□ -1.7
LMNB1-208ENST00000504788 CBLP22681 906 aa4.41□□□□□ -1.7
LMNB1-208ENST00000504788 GNLYP22749 145 aa4.41□□□□□ -1.7
LMNB1-208ENST00000504788 FKBP2P26885 142 aaKnown RBP4.41□□□□□ -1.7
LMNB1-208ENST00000504788 SFTPDP35247 375 aa4.41□□□□□ -1.7
LMNB1-208ENST00000504788 RPS5P46782 204 aaKnown RBP4.41□□□□□ -1.7
LMNB1-208ENST00000504788 GSSP48637 474 aa4.41□□□□□ -1.7
LMNB1-208ENST00000504788 SLC16A1P53985 500 aa4.41□□□□□ -1.7
LMNB1-208ENST00000504788 ELF3P78545 371 aaPredicted RBP4.41□□□□□ -1.7
LMNB1-208ENST00000504788 ADORA2A-AS1P86434 159 aa4.41□□□□□ -1.7
LMNB1-208ENST00000504788 PRKCDQ05655 676 aa4.41□□□□□ -1.7
LMNB1-208ENST00000504788 ST3GAL3Q11203 375 aa4.41□□□□□ -1.7
LMNB1-208ENST00000504788 FOXF2Q12947 444 aa4.41□□□□□ -1.7
LMNB1-208ENST00000504788 SLC17A1Q14916 467 aa4.41□□□□□ -1.7
LMNB1-208ENST00000504788 POU4F3Q15319 338 aa4.41□□□□□ -1.7
LMNB1-208ENST00000504788 ATP6AP1Q15904 470 aa4.41□□□□□ -1.7
LMNB1-208ENST00000504788 MS4A18Q3C1V0 323 aa4.41□□□□□ -1.7
LMNB1-208ENST00000504788 TMEM176BQ3YBM2 270 aaPredicted RBP4.41□□□□□ -1.7
LMNB1-208ENST00000504788 ZNF362Q5T0B9 420 aaPredicted RBP4.41□□□□□ -1.7
LMNB1-208ENST00000504788 FAM69AQ5T7M9 428 aa4.41□□□□□ -1.7
LMNB1-208ENST00000504788 NSUN5P2Q63ZY6 315 aa4.41□□□□□ -1.7
LMNB1-208ENST00000504788 C1orf94Q6P1W5 598 aa4.41□□□□□ -1.7
LMNB1-208ENST00000504788 PGBD2Q6P3X8 592 aa4.41□□□□□ -1.7
LMNB1-208ENST00000504788 PAQR6Q6TCH4 344 aa4.41□□□□□ -1.7
LMNB1-208ENST00000504788 GFRALQ6UXV0 394 aa4.41□□□□□ -1.7
LMNB1-208ENST00000504788 MBOAT2Q6ZWT7 520 aa4.41□□□□□ -1.7
LMNB1-208ENST00000504788 CD163Q86VB7 1156 aa4.41□□□□□ -1.7
LMNB1-208ENST00000504788 NRMQ8IXM6 262 aa4.41□□□□□ -1.7
LMNB1-208ENST00000504788 TMEM99Q8N816 258 aa4.41□□□□□ -1.7
LMNB1-208ENST00000504788 C9orf106Q8NAJ2 232 aa4.41□□□□□ -1.7
LMNB1-208ENST00000504788 OR4K5Q8NGD3 323 aa4.41□□□□□ -1.7
LMNB1-208ENST00000504788 OR5M9Q8NGP3 310 aa4.41□□□□□ -1.7
LMNB1-208ENST00000504788 OR2V1Q8NHB1 315 aa4.41□□□□□ -1.7
LMNB1-208ENST00000504788 MFSD8Q8NHS3 518 aa4.41□□□□□ -1.7
LMNB1-208ENST00000504788 FNDC9Q8TBE3 224 aa4.41□□□□□ -1.7
LMNB1-208ENST00000504788 TMEM239Q8WW34 195 aa4.41□□□□□ -1.7
LMNB1-208ENST00000504788 PYDC1Q8WXC3 89 aa4.41□□□□□ -1.7
LMNB1-208ENST00000504788 SARAFQ96BY9 339 aa4.41□□□□□ -1.7
LMNB1-208ENST00000504788 TTYH2Q9BSA4 534 aa4.41□□□□□ -1.7
LMNB1-208ENST00000504788 BCO1Q9HAY6 547 aa4.41□□□□□ -1.7
LMNB1-208ENST00000504788 TMEM27Q9HBJ8 222 aa4.41□□□□□ -1.7
LMNB1-208ENST00000504788 TAS2R5Q9NYW4 299 aa4.41□□□□□ -1.7
LMNB1-208ENST00000504788 REV1Q9UBZ9 1251 aa4.41□□□□□ -1.7
LMNB1-208ENST00000504788 TMEFF2Q9UIK5 374 aaPredicted RBP4.41□□□□□ -1.7
LMNB1-208ENST00000504788 TESMINQ9Y4I5 508 aa4.41□□□□□ -1.7
LMNB1-208ENST00000504788 AP4S1Q9Y587 144 aa4.41□□□□□ -1.7
LMNB1-208ENST00000504788 FBN2P35556 2912 aa4.41□□□□□ -1.7
LMNB1-208ENST00000504788 SPTAN1Q13813 2472 aaKnown RBP4.4□□□□□ -1.7
LMNB1-208ENST00000504788 A0A1W2PNV4 684 aa4.4□□□□□ -1.7
LMNB1-208ENST00000504788 ARRDC5A6NEK1 342 aa4.4□□□□□ -1.7
LMNB1-208ENST00000504788 AQP7P3A6NL99 342 aa4.4□□□□□ -1.7
LMNB1-208ENST00000504788 ENO4A6NNW6 628 aa4.4□□□□□ -1.7
LMNB1-208ENST00000504788 AHRRA9YTQ3 701 aa4.4□□□□□ -1.7
LMNB1-208ENST00000504788 E9PLN8 166 aa4.4□□□□□ -1.7
LMNB1-208ENST00000504788 EIF1AYO14602 144 aaKnown RBP4.4□□□□□ -1.7
LMNB1-208ENST00000504788 SEC14L5O43304 696 aa4.4□□□□□ -1.7
LMNB1-208ENST00000504788 TRAF3IP2O43734 574 aaPredicted RBP4.4□□□□□ -1.7
LMNB1-208ENST00000504788 MGRN1O60291 552 aa4.4□□□□□ -1.7
LMNB1-208ENST00000504788 CYTIPO60759 359 aa4.4□□□□□ -1.7
LMNB1-208ENST00000504788 KRT36O76013 467 aa4.4□□□□□ -1.7
LMNB1-208ENST00000504788 ZNF432O94892 652 aa4.4□□□□□ -1.7
LMNB1-208ENST00000504788 GADD45GO95257 159 aa4.4□□□□□ -1.7
LMNB1-208ENST00000504788 CGAP01215 116 aa4.4□□□□□ -1.7
LMNB1-208ENST00000504788 GASTP01350 101 aa4.4□□□□□ -1.7
LMNB1-208ENST00000504788 H1F0P07305 194 aaKnown RBP4.4□□□□□ -1.7
LMNB1-208ENST00000504788 GLI4P10075 376 aa4.4□□□□□ -1.7
LMNB1-208ENST00000504788 HLA-DOBP13765 273 aa4.4□□□□□ -1.7
LMNB1-208ENST00000504788 PLA2G2AP14555 144 aa4.4□□□□□ -1.7
LMNB1-208ENST00000504788 UQCRBP14927 111 aa4.4□□□□□ -1.7
LMNB1-208ENST00000504788 ITGA2P17301 1181 aa4.4□□□□□ -1.7
LMNB1-208ENST00000504788 HOXB6P17509 224 aaKnown RBP4.4□□□□□ -1.7
LMNB1-208ENST00000504788 CCNA2P20248 432 aa4.4□□□□□ -1.7
LMNB1-208ENST00000504788 POU3F2P20265 443 aaPredicted RBP4.4□□□□□ -1.7
LMNB1-208ENST00000504788 ACVR2AP27037 513 aa4.4□□□□□ -1.7
LMNB1-208ENST00000504788 TIMP3P35625 211 aa4.4□□□□□ -1.7
LMNB1-208ENST00000504788 KIR2DL2P43627 348 aaPredicted RBP4.4□□□□□ -1.7
LMNB1-208ENST00000504788 TAS2R41P59536 307 aa4.4□□□□□ -1.7
LMNB1-208ENST00000504788 COPZ1P61923 177 aa4.4□□□□□ -1.7
LMNB1-208ENST00000504788 PPP2R2BQ00005 443 aa4.4□□□□□ -1.7
LMNB1-208ENST00000504788 CHRNB3Q05901 458 aa4.4□□□□□ -1.7
LMNB1-208ENST00000504788 TRAM2Q15035 370 aa4.4□□□□□ -1.7
LMNB1-208ENST00000504788 PON3Q15166 354 aa4.4□□□□□ -1.7
LMNB1-208ENST00000504788 TOMM20Q15388 145 aa4.4□□□□□ -1.7
LMNB1-208ENST00000504788 EXOC3L2Q2M3D2 409 aa4.4□□□□□ -1.7
LMNB1-208ENST00000504788 EIF2S3LQ2VIR3 472 aaKnown RBP4.4□□□□□ -1.7
LMNB1-208ENST00000504788 FAM98BQ52LJ0 330 aaKnown RBP4.4□□□□□ -1.7
LMNB1-208ENST00000504788 FAHD1Q6P587 224 aa4.4□□□□□ -1.7
LMNB1-208ENST00000504788 C5orf46Q6UWT4 87 aa4.4□□□□□ -1.7
LMNB1-208ENST00000504788 RPTNQ6XPR3 784 aa4.4□□□□□ -1.7
LMNB1-208ENST00000504788 C3P1Q6ZMU1 363 aa4.4□□□□□ -1.7
LMNB1-208ENST00000504788 FAM122BQ7Z309 247 aa4.4□□□□□ -1.7
LMNB1-208ENST00000504788 CYP4Z1Q86W10 505 aa4.4□□□□□ -1.7
LMNB1-208ENST00000504788 SPATA24Q86W54 205 aa4.4□□□□□ -1.7
LMNB1-208ENST00000504788 MEX3DQ86XN8 651 aaKnown RBP4.4□□□□□ -1.7
LMNB1-208ENST00000504788 KIF18BQ86Y91 864 aa4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms